Home LiteratureArticle Details
PMID: 9261411 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Cryo-electron microscopy structure of yeast Ty retrotransposon virus-like particles.

Journal of virology ·Vol. 71 ·No. 9 ·1997-09-00 ·Pages 6863-8

Palmer KJ, Tichelaar W, Myers N, Burns NR, Butcher SJ, Kingsman AJ, Fuller SD, Saibil HR

Abstract

The virus-like particles (VLPs) produced by the yeast retrotransposon Ty1 are functionally related to retroviral cores. These particles are unusual in that they have variable radif. A paired mass-radius analysis of VLPs by scanning transmission electron microscopy showed that many of these particles form an icosahedral T-number series. Three-dimensional reconstruction to 38-A resolution from cryo-electron micrographs of T = 3 and T = 4 shells revealed that the single structural protein encoded by the TYA gene assembles into spiky shells from trimeric units.

MeSH Terms
Capsid/ultrastructure Cryopreservation DNA, Fungal/ultrastructure Microscopy, Electron Retroelements Retroviridae/ultrastructure Saccharomyces cerevisiae/genetics Virion
Chemicals
DNA, Fungal Retroelements
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Palmer K J
Department of Crystallography, Birkbeck College, London, United Kingdom.
Tichelaar W
Myers N
Burns N R
Butcher S J
Kingsman A J
Fuller S D
Saibil H R
References (33)
33 references, click to expand
  1. Procedures for three-dimensional reconstruction of spherical viruses by Fourier synthesis from electron micrographs.
    Philos Trans R Soc Lond B Biol Sci. 1971 May 27;261(837):221-30 PMID: 4399207
  2. Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid.
    Cell. 1996 Dec 27;87(7):1285-94 PMID: 8980234
  3. Ty elements transpose through an RNA intermediate.
    Cell. 1985 Mar;40(3):491-500 PMID: 2982495
  4. Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression.
    Proc Natl Acad Sci U S A. 1985 May;82(9):2829-33 PMID: 2581255
  5. Reverse transcriptase activity and Ty RNA are associated with virus-like particles in yeast.
    Nature. 1985 Dec 12-18;318(6046):583-6 PMID: 2415827
  6. The T=4 envelope of Sindbis virus is organized by interactions with a complementary T=3 capsid.
    Cell. 1987 Mar 27;48(6):923-34 PMID: 3829124
  7. The functions and relationships of Ty-VLP proteins in yeast reflect those of mammalian retroviral proteins.
    Cell. 1987 Apr 10;49(1):111-9 PMID: 3030564
  8. Reconstruction of the three-dimensional structure of simian virus 40 and visualization of the chromatin core.
    Proc Natl Acad Sci U S A. 1988 Jan;85(2):422-6 PMID: 2829185
  9. The DNA intermediate in yeast Ty1 element transposition copurifies with virus-like particles: cell-free Ty1 transposition.
    Cell. 1988 Sep 23;54(7):955-66 PMID: 2843295
  10. Similarity of reverse transcriptase-like sequences of viruses, transposable elements, and mitochondrial introns.
    Mol Biol Evol. 1988 Nov;5(6):675-90 PMID: 2464735
  11. Magnification calibration and the determination of spherical virus diameters using cryo-microscopy.
    Ultramicroscopy. 1989 Jul-Aug;30(3):281-97 PMID: 2800042
  12. Assembly and morphology of HIV: potential effect of structure on viral function.
    AIDS. 1991 Jun;5(6):617-37 PMID: 1652977
  13. Symmetry, flexibility and permeability in the structure of yeast retrotransposon virus-like particles.
    EMBO J. 1992 Mar;11(3):1155-64 PMID: 1312462
  14. Association of integrase, matrix, and reverse transcriptase antigens of human immunodeficiency virus type 1 with viral nucleic acids following acute infection.
    Proc Natl Acad Sci U S A. 1993 Jul 1;90(13):6125-9 PMID: 7687060
  15. A nuclear localization signal within HIV-1 matrix protein that governs infection of non-dividing cells.
    Nature. 1993 Oct 14;365(6447):666-9 PMID: 8105392
  16. Fullerene-like organization of HIV gag-protein shell in virus-like particles produced by recombinant baculovirus.
    Virology. 1994 Jan;198(1):288-96 PMID: 8259664
  17. Three-dimensional structure of hepatitis B virus core particles determined by electron cryomicroscopy.
    Cell. 1994 Jun 17;77(6):943-50 PMID: 8004680
  18. Structural similarity between the p17 matrix protein of HIV-1 and interferon-gamma.
    Nature. 1994 Aug 25;370(6491):666-8 PMID: 8065455
  19. Three-dimensional structure of the human immunodeficiency virus type 1 matrix protein.
    J Mol Biol. 1994 Nov 25;244(2):198-223 PMID: 7966331
  20. Linker insertion mutations in the human immunodeficiency virus type 1 gag gene: effects on virion particle assembly, release, and infectivity.
    J Virol. 1995 Feb;69(2):642-50 PMID: 7815527
  21. Crystal structure of SIV matrix antigen and implications for virus assembly.
    Nature. 1995 Dec 14;378(6558):743-7 PMID: 7501025
  22. Evolutionary conservation in the hepatitis B virus core structure: comparison of human and duck cores.
    Structure. 1995 Oct 15;3(10):1009-19 PMID: 8589996
  23. Gag-Gag interactions in the C-terminal domain of human immunodeficiency virus type 1 p24 capsid antigen are essential for Gag particle assembly.
    J Gen Virol. 1996 Apr;77 ( Pt 4):743-51 PMID: 8627263
  24. Structure of the amino-terminal core domain of the HIV-1 capsid protein.
    Science. 1996 Jul 12;273(5272):231-5 PMID: 8662505
  25. A critical proteolytic cleavage site near the C terminus of the yeast retrotransposon Ty1 Gag protein.
    J Virol. 1996 Aug;70(8):5548-56 PMID: 8764068
  26. Three-dimensional reconstruction of icosahedral particles--the uncommon line.
    J Struct Biol. 1996 Jan-Feb;116(1):48-55 PMID: 8742722
  27. A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy.
    J Struct Biol. 1996 Jan-Feb;116(1):120-30 PMID: 8742733
  28. SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields.
    J Struct Biol. 1996 Jan-Feb;116(1):190-9 PMID: 8742743
  29. Dissection of a retrovirus envelope protein reveals structural similarity to influenza hemagglutinin.
    Curr Biol. 1995 Dec 1;5(12):1377-83 PMID: 8749390
  30. Crystal structure of dimeric HIV-1 capsid protein.
    Nat Struct Biol. 1996 Sep;3(9):763-70 PMID: 8784350
  31. Morphogenesis at the retrotransposon-retrovirus interface: gypsy and copia families in yeast and Drosophila.
    Curr Top Microbiol Immunol. 1996;214:261-96 PMID: 8791731
  32. Identification of proteolytic cleavage sites within the gag-analogue protein of Ty1 virus-like particles.
    Mol Microbiol. 1996 Dec;22(5):1035-43 PMID: 8971723
  33. Comparative mass measurement of biological macromolecules by scanning transmission electron microscopy.
    J Microsc. 1981 Jun;122(Pt 3):275-86 PMID: 6113286
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1997-09-00
Pages
6863-8
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC191967
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]