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PMID: 9268634 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

The human beta-defensin-1 and alpha-defensins are encoded by adjacent genes: two peptide families with differing disulfide topology share a common ancestry.

Genomics ·Vol. 43 ·No. 3 ·1997-08-01 ·Pages 316-20

Liu L, Zhao C, Heng HH, Ganz T

Abstract

We cloned a novel human beta-defensin gene and determined its full-length cDNA sequence. The entire gene spanned more than 7 kb and included a large 6962-bp intron. The 362-bp cDNA encoded a prepropeptide that corresponded precisely to the recently identified human beta-defensin HBD-1, an antimicrobial peptide implicated in the resistance of epithelial surfaces to microbial colonization. By two-color fluorescence in situ hybridization on both metaphase chromosome and released chromatin fiber, HBD-1 gene (DEFB1 in HUGO/GDB nomenclature) mapped to chromosomal region 8p23.1-p23.2 in close proximity (within 100-150 kb) to the gene for the human neutrophil alpha-defensin HNP-1 (DEFA1). Thus, despite a complete lack of DNA sequence similarity and despite differences in their disulfide-pairing pattern, the alpha- and beta-families appear to have evolved from a common premammalian defensin gene.

MeSH Terms
Algorithms Amino Acid Sequence Anti-Infective Agents/metabolism Base Sequence Blood Proteins/genetics Chromosome Mapping Chromosomes, Human, Pair 8/genetics DNA, Complementary/analysis,chemistry,genetics Databases, Factual Defensins Disulfides/chemistry Evolution, Molecular Genes/genetics Humans In Situ Hybridization, Fluorescence Molecular Sequence Data Multigene Family Peptides/chemistry,genetics Protein Structure, Secondary Sequence Alignment/methods Sequence Homology, Amino Acid alpha-Defensins beta-Defensins
Chemicals
Anti-Infective Agents Blood Proteins DEFB1 protein, human DNA, Complementary Defensins Disulfides Peptides alpha-Defensins beta-Defensins human neutrophil peptide 1
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Liu L
Department of Medicine and Will Rogers Institute for Pulmonary Research, University of California at Los Angeles School of Medicine, 90095, USA.
Zhao C
Heng H H
Ganz T
Article Info
Journal
Genomics
Abbr.
Genomics
ISSN
0888-7543
Published
1997-08-01
Pages
316-20
Language
English
Region
United States
NLM ID
8800135
Subset
IM
Grants
NHLBI NIH HHS · HL-07014 · United States
NHLBI NIH HHS · HL-35640 · United States
NHLBI NIH HHS · HL-46809 · United States
Databases
GENBANK
U50930, U50931, X92744
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