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PMID: 9334352 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Actinin-associated LIM protein: identification of a domain interaction between PDZ and spectrin-like repeat motifs.

The Journal of cell biology ·Vol. 139 ·No. 2 ·1997-10-20 ·Pages 507-15

Xia H, Winokur ST, Kuo WL, Altherr MR, Bredt DS

Abstract

PDZ motifs are protein-protein interaction domains that often bind to COOH-terminal peptide sequences. The two PDZ proteins characterized in skeletal muscle, syntrophin and neuronal nitric oxide synthase, occur in the dystrophin complex, suggesting a role for PDZ proteins in muscular dystrophy. Here, we identify actinin-associated LIM protein (ALP), a novel protein in skeletal muscle that contains an NH2-terminal PDZ domain and a COOH-terminal LIM motif. ALP is expressed at high levels only in differentiated skeletal muscle, while an alternatively spliced form occurs at low levels in the heart. ALP is not a component of the dystrophin complex, but occurs in association with alpha-actinin-2 at the Z lines of myofibers. Biochemical and yeast two-hybrid analyses demonstrate that the PDZ domain of ALP binds to the spectrin-like motifs of alpha-actinin-2, defining a new mode for PDZ domain interactions. Fine genetic mapping studies demonstrate that ALP occurs on chromosome 4q35, near the heterochromatic locus that is mutated in fascioscapulohumeral muscular dystrophy.

MeSH Terms
Actinin/metabolism Amino Acid Sequence Animals Base Sequence Binding Sites Cell Line Chromosome Mapping Chromosomes, Human, Pair 4 Genetic Variation Humans Karyotyping LIM Domain Proteins Microfilament Proteins/biosynthesis,chemistry,genetics Molecular Sequence Data Muscle, Skeletal/metabolism Polymerase Chain Reaction Sequence Alignment Sequence Homology, Amino Acid Spectrin/chemistry
Chemicals
LIM Domain Proteins Microfilament Proteins PDLIM3 protein, human Pdlim3 protein, rat Actinin Spectrin
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Xia H
Department of Physiology, University of California at San Francisco, San Francisco, California 94143, USA.
Winokur S T
Kuo W L
Altherr M R
Bredt D S
References (51)
51 references, click to expand
  1. Selective loss of sarcolemmal nitric oxide synthase in Becker muscular dystrophy.
    J Exp Med. 1996 Aug 1;184(2):609-18 PMID: 8760814
  2. Muscle LIM protein, a novel essential regulator of myogenesis, promotes myogenic differentiation.
    Cell. 1994 Oct 21;79(2):221-31 PMID: 7954791
  3. Binding of the inward rectifier K+ channel Kir 2.3 to PSD-95 is regulated by protein kinase A phosphorylation.
    Neuron. 1996 Oct;17(4):759-67 PMID: 8893032
  4. Modular organization of the PDZ domains in the human discs-large protein suggests a mechanism for coupling PDZ domain-binding proteins to ATP and the membrane cytoskeleton.
    J Cell Biol. 1996 Nov;135(3):753-66 PMID: 8909548
  5. Protein-protein interaction of zinc finger LIM domains with protein kinase C.
    J Biol Chem. 1996 Dec 6;271(49):31029-32 PMID: 8940095
  6. Domain interaction between NMDA receptor subunits and the postsynaptic density protein PSD-95.
    Science. 1995 Sep 22;269(5231):1737-40 PMID: 7569905
  7. The FSHD-associated repeat, D4Z4, is a member of a dispersed family of homeobox-containing repeats, subsets of which are clustered on the short arms of the acrocentric chromosomes.
    Genomics. 1995 Aug 10;28(3):389-97 PMID: 7490072
  8. Clustering of Shaker-type K+ channels by interaction with a family of membrane-associated guanylate kinases.
    Nature. 1995 Nov 2;378(6552):85-8 PMID: 7477295
  9. Cloning of a rat cDNA encoding a novel LIM domain protein with high homology to rat RIL.
    Gene. 1995 Nov 20;165(2):267-71 PMID: 8522188
  10. Specific in vivo association between the bHLH and LIM proteins implicated in human T cell leukemia.
    EMBO J. 1994 Oct 17;13(20):4831-9 PMID: 7957052
  11. The LIM domain: a new structural motif found in zinc-finger-like proteins.
    Trends Genet. 1994 Sep;10(9):315-20 PMID: 7974745
  12. beta 2-Syntrophin: localization at the neuromuscular junction in skeletal muscle.
    Neuroreport. 1994 Aug 15;5(13):1577-80 PMID: 7819523
  13. Expression of ril, a novel LIM domain gene, is down-regulated in Hras-transformed cells and restored in phenotypic revertants.
    Oncogene. 1995 Jan 5;10(1):61-8 PMID: 7824279
  14. A novel protein encoded by the InaD gene regulates recovery of visual transduction in Drosophila.
    Neuron. 1995 Jan;14(1):201-10 PMID: 7826638
  15. Overexcited or inactive: ion channels in muscle disease.
    Cell. 1995 Mar 10;80(5):681-6 PMID: 7534212
  16. Semiautomated DNA probe mapping using digital imaging microscopy: II. System performance.
    Cytometry. 1995 Jan 1;19(1):60-9 PMID: 7705186
  17. DHR domains in syntrophins, neuronal NO synthases and other intracellular proteins.
    Trends Biochem Sci. 1995 Mar;20(3):102-3 PMID: 7535955
  18. FAP-1: a protein tyrosine phosphatase that associates with Fas.
    Science. 1995 Apr 21;268(5209):411-5 PMID: 7536343
  19. Efforts toward understanding the molecular basis of facioscapulohumeral muscular dystrophy.
    Muscle Nerve Suppl. 1995;2:S32-8 PMID: 7739623
  20. A physical map of chromosome 20 established using fluorescence in situ hybridization and digital image analysis.
    Genomics. 1995 Mar 1;26(1):134-7 PMID: 7782072
  21. Plectin deficiency results in muscular dystrophy with epidermolysis bullosa.
    Nat Genet. 1996 Aug;13(4):450-7 PMID: 8696340
  22. Specificity of LIM domain interactions with receptor tyrosine kinases.
    J Biol Chem. 1996 Jul 5;271(27):15934-41 PMID: 8663233
  23. Nitric oxide synthase complexed with dystrophin and absent from skeletal muscle sarcolemma in Duchenne muscular dystrophy.
    Cell. 1995 Sep 8;82(5):743-52 PMID: 7545544
  24. The C. elegans vulval induction gene lin-2 encodes a member of the MAGUK family of cell junction proteins.
    Development. 1996 Jan;122(1):97-111 PMID: 8565857
  25. Good genes in bad neighbourhoods.
    Nat Genet. 1996 Mar;12(3):229-32 PMID: 8589709
  26. Interaction of nitric oxide synthase with the postsynaptic density protein PSD-95 and alpha1-syntrophin mediated by PDZ domains.
    Cell. 1996 Mar 8;84(5):757-67 PMID: 8625413
  27. Regulation of the TRP Ca2+ channel by INAD in Drosophila photoreceptors.
    Neuron. 1996 May;16(5):991-8 PMID: 8630257
  28. Recognition of unique carboxyl-terminal motifs by distinct PDZ domains.
    Science. 1997 Jan 3;275(5296):73-7 PMID: 8974395
  29. MLP-deficient mice exhibit a disruption of cardiac cytoarchitectural organization, dilated cardiomyopathy, and heart failure.
    Cell. 1997 Feb 7;88(3):393-403 PMID: 9039266
  30. PDZ domain of neuronal nitric oxide synthase recognizes novel C-terminal peptide sequences.
    Nat Biotechnol. 1997 Apr;15(4):336-42 PMID: 9094134
  31. Interaction of ion channels and receptors with PDZ domain proteins.
    Curr Opin Neurobiol. 1997 Jun;7(3):368-73 PMID: 9232802
  32. Synaptic signaling by nitric oxide.
    Curr Opin Neurobiol. 1997 Jun;7(3):374-8 PMID: 9232800
  33. Occurrence and immunolocalization of plectin in tissues.
    J Cell Biol. 1983 Sep;97(3):887-901 PMID: 6350322
  34. Genetic counterselective procedure to isolate interspecific cell hybrids containing single human chromosomes: construction of cell hybrids and recombinant DNA libraries specific for human chromosomes 3 and 4.
    Somat Cell Mol Genet. 1986 Mar;12(2):163-74 PMID: 3457476
  35. mec-3, a homeobox-containing gene that specifies differentiation of the touch receptor neurons in C. elegans.
    Cell. 1988 Jul 1;54(1):5-16 PMID: 2898300
  36. A novel genetic system to detect protein-protein interactions.
    Nature. 1989 Jul 20;340(6230):245-6 PMID: 2547163
  37. Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-11.
    Nature. 1990 Apr 26;344(6269):876-9 PMID: 1970421
  38. Insulin gene enhancer binding protein Isl-1 is a member of a novel class of proteins containing both a homeo- and a Cys-His domain.
    Nature. 1990 Apr 26;344(6269):879-82 PMID: 1691825
  39. Prenatal identification of a girl with a t(X;4)(p21;q35) translocation: molecular characterisation, paternal origin, and association with muscular dystrophy.
    J Med Genet. 1990 Jul;27(7):426-32 PMID: 2395160
  40. Structural features in eukaryotic mRNAs that modulate the initiation of translation.
    J Biol Chem. 1991 Oct 25;266(30):19867-70 PMID: 1939050
  41. Cloning and characterization of two human skeletal muscle alpha-actinin genes located on chromosomes 1 and 11.
    J Biol Chem. 1992 May 5;267(13):9281-8 PMID: 1339456
  42. The rat brain postsynaptic density fraction contains a homolog of the Drosophila discs-large tumor suppressor protein.
    Neuron. 1992 Nov;9(5):929-42 PMID: 1419001
  43. Chromosome 4q DNA rearrangements associated with facioscapulohumeral muscular dystrophy.
    Nat Genet. 1992 Sep;2(1):26-30 PMID: 1363881
  44. The tight junction protein ZO-1 is homologous to the Drosophila discs-large tumor suppressor protein of septate junctions.
    Proc Natl Acad Sci U S A. 1993 Aug 15;90(16):7834-8 PMID: 8395056
  45. Two forms of mouse syntrophin, a 58 kd dystrophin-associated protein, differ in primary structure and tissue distribution.
    Neuron. 1993 Sep;11(3):531-40 PMID: 7691103
  46. A radiation hybrid map of 15 loci on the distal long arm of chromosome 4, the region containing the gene responsible for facioscapulohumeral muscular dystrophy (FSHD).
    Am J Hum Genet. 1993 Oct;53(4):874-80 PMID: 8213815
  47. Detection of messenger RNA by in situ hybridization.
    Methods Enzymol. 1993;225:384-404 PMID: 7901737
  48. FSHD associated DNA rearrangements are due to deletions of integral copies of a 3.2 kb tandemly repeated unit.
    Hum Mol Genet. 1993 Dec;2(12):2037-42 PMID: 8111371
  49. The DNA rearrangement associated with facioscapulohumeral muscular dystrophy involves a heterochromatin-associated repetitive element: implications for a role of chromatin structure in the pathogenesis of the disease.
    Chromosome Res. 1994 May;2(3):225-34 PMID: 8069466
  50. The LIM domain is a modular protein-binding interface.
    Cell. 1994 Oct 21;79(2):211-9 PMID: 7954790
  51. PDZs and receptor/channel clustering: rounding up the latest suspects.
    Neuron. 1996 Oct;17(4):575-8 PMID: 8893015
Article Info
Journal
The Journal of cell biology
Abbr.
J Cell Biol
ISSN
0021-9525
Published
1997-10-20
Pages
507-15
Language
English
Region
United States
NLM ID
0375356
PMCID
PMC2139795
Subset
IM
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