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PMID: 9500854 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Identification, quantitation, and cellular localization of PDE1 calmodulin-stimulated cyclic nucleotide phosphodiesterases.

Methods (San Diego, Calif.) ·Vol. 14 ·No. 1 ·1998-01-00 ·Pages 3-19

Sonnenburg WK, Rybalkin SD, Bornfeldt KE, Kwak KS, Rybalkina IG, Beavo JA

Abstract

The calmodulin-stimulated cyclic nucleotide phosphodiesterases (PDE1s) constitute a large gene family and are found in a wide variety of tissues and cells. Because of the functional diversity of PDE1 genes and the observation that these isozymes often make up a major component of the total cyclic nucleotide hydrolytic activity in certain cell types, PDE1s are of growing interest as targets for therapeutic intervention. Here we describe a series of methodologies to identify, quantitate, and determine the cellular expression of PDE1 isozymes. We describe first the resolution of different PDEs using high-performance anion-exchange chromatography and then a Western blotting methodology for identifying or authenticating PDE1 activities. Next we present an immunoprecipitation method that can be used for quantitating specific PDE1 isoforms and describe the use of RNase protection analysis for further identification of PDE1 subtypes. Finally, we provide a simple, immunocytochemical method for determining the cellular expression of PDE1 isozymes. Combined, the above methodologies should allow an investigator to identify, quantitate, and determine the cellular localization of PDE1 isozymes in any tissue with little ambiguity.

MeSH Terms
3',5'-Cyclic-AMP Phosphodiesterases/analysis,isolation & purification 3',5'-Cyclic-GMP Phosphodiesterases/analysis,isolation & purification Amino Acid Sequence Animals Blotting, Western Cattle Cells, Cultured Chromatography, High Pressure Liquid Cyclic Nucleotide Phosphodiesterases, Type 1 Immunohistochemistry Isoenzymes/analysis Molecular Sequence Data Muscle, Smooth, Vascular/chemistry Myocardium/chemistry,cytology Oligonucleotides, Antisense/metabolism Papio Phosphoric Diester Hydrolases Precipitin Tests Rats Ribonucleases/metabolism Sequence Alignment
Chemicals
Isoenzymes Oligonucleotides, Antisense Ribonucleases Phosphoric Diester Hydrolases 3',5'-Cyclic-AMP Phosphodiesterases Cyclic Nucleotide Phosphodiesterases, Type 1 3',5'-Cyclic-GMP Phosphodiesterases
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Sonnenburg W K
Department of Pharmacology, University of Washington, Seattle, Washington 98195, USA. [email protected]
Rybalkin S D
Bornfeldt K E
Kwak K S
Rybalkina I G
Beavo J A
Article Info
Journal
Methods (San Diego, Calif.)
Abbr.
Methods
ISSN
1046-2023
Published
1998-01-00
Pages
3-19
Language
English
Region
United States
NLM ID
9426302
Subset
IM
Grants
NIDDK NIH HHS · DK21723 · United States
NHLBI NIH HHS · HL44948 · United States
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