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PMID: 9501119 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Light regulation of Fed-1 mRNA requires an element in the 5' untranslated region and correlates with differential polyribosome association.

The Plant cell ·Vol. 10 ·No. 3 ·1998-03-00 ·Pages 475-84

Dickey LF, Petracek ME, Nguyen TT, Hansen ER, Thompson WF

Abstract

Light regulation of Fed-1 mRNA abundance in the leaves of green plants is primarily a post-transcriptional process. Previously, we have shown that the Fed-1 mRNA light response requires an open reading frame, indicating that the light regulation of the mRNA depends on its concurrent translation. We now show that light-induced increases in Fed-1 mRNA abundance are associated with increases in polyribosome association that require both a functional AUG and a normal Fed-1 translational start context. We also present evidence that light regulation of Fed-1 mRNA levels requires more than efficient translation per se. Substitution of the efficiently translated tobacco mosaic virus Omega 5' untranslated region resulted in a loss of Fed-1 light regulation. In addition, we identified a CAT T repeat element located near the 5' terminus of the Fed-1 5' untranslated region that is essential for light regulation. We introduced two different mutations in the CAT T repeat element, but only one of these substitutions blocked the normal light effect on polyribosome association, whereas both altered dark-induced Fed-1 mRNA disappearance. The element may thus be important for Fed-1 mRNA stability rather than polyribosome loading. We propose a model in which Fed-1 mRNA is relatively stable when it is associated with polyribosomes in illuminated plants but in darkness is not polyribosome associated and is thus rapidly degraded by a process involving the CAT T repeat element.

MeSH Terms
Codon Enhancer Elements, Genetic Ferredoxins/genetics Gene Expression Regulation, Plant/radiation effects Light Mutagenesis, Site-Directed Plants, Genetically Modified Plants, Toxic Polyribosomes/metabolism Protein Biosynthesis RNA, Messenger/metabolism Regulatory Sequences, Nucleic Acid Tobacco/genetics
Chemicals
Codon Ferredoxins RNA, Messenger
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Dickey L F
Department of Botany, North Carolina State University, Raleigh, North Carolina 27695-7612, USA. [email protected]
Petracek M E
Nguyen T T
Hansen E R
Thompson W F
References (38)
38 references, click to expand
  1. Identification of the motifs within the tobacco mosaic virus 5'-leader responsible for enhancing translation.
    Nucleic Acids Res. 1992 Sep 11;20(17):4631-8 PMID: 1408765
  2. Evidence for instability of mRNAs containing AUUUA motifs mediated through translation-dependent assembly of a > 20S degradation complex.
    Genes Dev. 1992 Oct;6(10):1927-39 PMID: 1398070
  3. Rare codons are not sufficient to destabilize a reporter gene transcript in tobacco.
    Plant Mol Biol. 1997 Oct;35(3):383-7 PMID: 9349262
  4. Promoter and leader regions involved in the expression of the Arabidopsis ferredoxin A gene.
    Plant J. 1993 Jan;3(1):161-74 PMID: 8401602
  5. cis-Acting Elements for Light Regulation of Pea Ferredoxin I Gene Expression Are Located within Transcribed Sequences.
    Plant Cell. 1989 Jul;1(7):691-698 PMID: 12359905
  6. mRNA turnover in yeast promoted by the MATalpha1 instability element.
    Nucleic Acids Res. 1996 Nov 1;24(21):4304-12 PMID: 8932387
  7. A comparison of eukaryotic viral 5'-leader sequences as enhancers of mRNA expression in vivo.
    Nucleic Acids Res. 1987 Nov 11;15(21):8693-711 PMID: 2825117
  8. Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells.
    Annu Rev Biochem. 1996;65:693-739 PMID: 8811193
  9. Abscisic acid-responsive sequences from the em gene of wheat.
    Plant Cell. 1989 Oct;1(10):969-76 PMID: 2562556
  10. Visualizing mRNA expression in plant protoplasts: factors influencing efficient mRNA uptake and translation.
    Plant Cell. 1989 Mar;1(3):301-11 PMID: 2535505
  11. mRNA stability in mammalian cells.
    Microbiol Rev. 1995 Sep;59(3):423-50 PMID: 7565413
  12. The reconstruction and expression of a Bacillus thuringiensis cryIIIA gene in protoplasts and potato plants.
    Plant Mol Biol. 1993 Mar;21(6):1131-45 PMID: 8490132
  13. Inhibition of translational initiation in the yeast Saccharomyces cerevisiae as a function of the stability and position of hairpin structures in the mRNA leader.
    J Biol Chem. 1993 Mar 25;268(9):6453-62 PMID: 8454618
  14. Methods for isolation and analysis of polyribosomes.
    Methods Cell Biol. 1995;50:209-22 PMID: 8531795
  15. Codon usage tabulated from the GenBank genetic sequence data.
    Nucleic Acids Res. 1990 Apr 25;18 Suppl:2367-411 PMID: 2333226
  16. The sequence surrounding the translation initiation codon of the pea plastocyanin gene increases translational efficiency of a reporter gene.
    Plant Mol Biol. 1995 Nov;29(3):621-6 PMID: 8534858
  17. Binary Agrobacterium vectors for plant transformation.
    Nucleic Acids Res. 1984 Nov 26;12(22):8711-21 PMID: 6095209
  18. Enhanced expression in tobacco of the gene encoding green fluorescent protein by modification of its codon usage.
    Plant Mol Biol. 1997 Apr;33(6):989-99 PMID: 9154981
  19. Light modulation of ferredoxin mRNA abundance requires an open reading frame.
    Plant Cell. 1994 Aug;6(8):1171-6 PMID: 7919986
  20. A small segment of the MAT alpha 1 transcript promotes mRNA decay in Saccharomyces cerevisiae: a stimulatory role for rare codons.
    Mol Cell Biol. 1993 Sep;13(9):5141-8 PMID: 8355674
  21. Light regulatory sequences are located within the 5' portion of the Fed-1 message sequence.
    EMBO J. 1992 Jun;11(6):2311-7 PMID: 1600949
  22. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.
    EMBO J. 1987 Dec 20;6(13):3901-7 PMID: 3327686
  23. Genetic transformation, recovery, and characterization of fertile soybean transgenic for a synthetic Bacillus thuringiensis cryIAc gene.
    Plant Physiol. 1996 Sep;112(1):121-9 PMID: 8819322
  24. Post-transcriptional regulation of nuclear-encoded genes in higher plants: the roles of mRNA stability and translation.
    Plant Mol Biol. 1993 Dec;23(6):1091-104 PMID: 8292775
  25. Leader length and secondary structure modulate mRNA function under conditions of stress.
    Mol Cell Biol. 1988 Jul;8(7):2737-44 PMID: 3405216
  26. Features in the 5' non-coding sequences of rabbit alpha and beta-globin mRNAs that affect translational efficiency.
    J Mol Biol. 1994 Jan 7;235(1):95-110 PMID: 8289269
  27. Turnover mechanisms of the stable yeast PGK1 mRNA.
    Mol Cell Biol. 1995 Apr;15(4):2145-56 PMID: 7891709
  28. Both internal and external regulatory elements control expression of the pea Fed-1 gene in transgenic tobacco seedlings.
    Plant Cell. 1992 Apr;4(4):389-95 PMID: 1498599
  29. Light-regulated changes in abundance and polyribosome association of ferredoxin mRNA are dependent on photosynthesis.
    Plant Cell. 1997 Dec;9(12):2291-300 PMID: 9437868
  30. Regulation of mRNA turnover in eukaryotic cells.
    Crit Rev Eukaryot Gene Expr. 1991;1(2):99-126 PMID: 1802106
  31. A simple and general method for transferring genes into plants.
    Science. 1985 Mar 8;227(4691):1229-31 PMID: 17757866
  32. Disruption of ribosomal scanning on the 5'-untranslated region, and not restriction of translational initiation per se, modulates the stability of nonaberrant mRNAs in the yeast Saccharomyces cerevisiae.
    J Biol Chem. 1997 Apr 4;272(14):9131-40 PMID: 9083042
  33. Translation and a 42-nucleotide segment within the coding region of the mRNA encoded by the MAT alpha 1 gene are involved in promoting rapid mRNA decay in yeast.
    Proc Natl Acad Sci U S A. 1990 Apr;87(7):2780-4 PMID: 2181450
  34. Characterization of a single copy gene encoding ferredoxin I from pea.
    Plant Cell. 1989 Jul;1(7):681-90 PMID: 2535518
  35. Problems that can limit the expression of foreign genes in plants: lessons to be learned from B.t. toxin genes.
    Genet Eng (N Y). 1996;18:83-99 PMID: 8785128
  36. Control of mRNA stability in higher plants.
    Plant Mol Biol. 1996 Oct;32(1-2):63-78 PMID: 8980474
  37. Messenger RNA degradation in eukaryotes.
    Cell. 1993 Aug 13;74(3):413-21 PMID: 7688664
  38. Site-directed mutagenesis by overlap extension using the polymerase chain reaction.
    Gene. 1989 Apr 15;77(1):51-9 PMID: 2744487
Article Info
Journal
The Plant cell
Abbr.
Plant Cell
ISSN
1040-4651
Published
1998-03-00
Pages
475-84
Language
English
Region
England
NLM ID
9208688
PMCID
PMC143995
Subset
IM
Grants
NIGMS NIH HHS · 1F32GM15510-01 · United States
NIGMS NIH HHS · GM43108 · United States
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