Home LiteratureArticle Details
PMID: 9789028 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Noncytopathic Sindbis virus RNA vectors for heterologous gene expression.

Agapov EV, Frolov I, Lindenbach BD, Prágai BM, Schlesinger S, Rice CM

Abstract

Infection of vertebrate cells with alphaviruses normally leads to prodigious expression of virus-encoded genes and a dramatic inhibition of host protein synthesis. Recombinant Sindbis viruses and replicons have been useful as vectors for high level foreign gene expression, but the cytopathic effects of viral replication have limited their use to transient studies. We recently selected Sindbis replicons capable of persistent, noncytopathic growth in BHK cells and describe here a new generation of Sindbis vectors useful for long-term foreign gene expression based on such replicons. Foreign genes of interest as well as the dominant selectable marker puromycin N-acteyltransferase, which confers resistance to the drug puromycin, were expressed as subgenomic transcripts of noncytopathic replicons or defective-interfering genomes complemented in trans by a replicon. Based on these strategies, we developed vectors that can be initiated via either RNA or DNA transfection and analyzed them for their level and stability of foreign gene expression. Noncytopathic Sindbis vectors express reasonably high levels of protein in nearly every cell. These vectors should prove to be flexible tools for the rapid expression of heterologous genes under conditions in which cellular metabolism is not perturbed, and we illustrate their utility with a number of foreign proteins.

MeSH Terms
Animals Cell Line Cloning, Molecular Cricetinae DNA-Directed RNA Polymerases/biosynthesis,genetics Electroporation Genes, Reporter Genetic Vectors Green Fluorescent Proteins Kidney Luminescent Proteins/biosynthesis,genetics Plasmids RNA, Viral/genetics Recombinant Proteins/biosynthesis Replicon Sindbis Virus/genetics Transcription, Genetic Transfection/methods Viral Proteins beta-Galactosidase/biosynthesis,genetics
Chemicals
Luminescent Proteins RNA, Viral Recombinant Proteins Viral Proteins Green Fluorescent Proteins bacteriophage T7 RNA polymerase DNA-Directed RNA Polymerases beta-Galactosidase
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Agapov E V
Department of Molecular Microbiology, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, MO 63110-1093, USA.
Frolov I
Lindenbach B D
Prágai B M
Schlesinger S
Rice C M
References (39)
39 references, click to expand
  1. Complete nucleotide sequence of the genomic RNA of Sindbis virus.
    Virology. 1984 Feb;133(1):92-110 PMID: 6322438
  2. In vitro mutagenesis of a full-length cDNA clone of Semliki Forest virus: the small 6,000-molecular-weight membrane protein modulates virus release.
    J Virol. 1991 Aug;65(8):4107-13 PMID: 2072446
  3. Deletion mapping of Sindbis virus DI RNAs derived from cDNAs defines the sequences essential for replication and packaging.
    Cell. 1986 Jan 17;44(1):137-45 PMID: 3753584
  4. Direct method for quantitation of extreme polymerase error frequencies at selected single base sites in viral RNA.
    J Virol. 1986 Jan;57(1):219-28 PMID: 3001347
  5. Production of infectious RNA transcripts from Sindbis virus cDNA clones: mapping of lethal mutations, rescue of a temperature-sensitive marker, and in vitro mutagenesis to generate defined mutants.
    J Virol. 1987 Dec;61(12):3809-19 PMID: 3479621
  6. Direct measurement of the poliovirus RNA polymerase error frequency in vitro.
    J Virol. 1988 Feb;62(2):558-62 PMID: 2826815
  7. Sindbis virus: an efficient, broad host range vector for gene expression in animal cells.
    Science. 1989 Mar 3;243(4895):1188-91 PMID: 2922607
  8. RNA viruses as gene expression vectors.
    Virus Genes. 1989 Sep;3(1):85-91 PMID: 2815597
  9. A simple assay for DNA transfection by incubation of the cells in culture dishes with substrates for beta-galactosidase.
    Biotechniques. 1989 Jun;7(6):576-9 PMID: 2517211
  10. Production of yellow fever virus proteins in infected cells: identification of discrete polyprotein species and analysis of cleavage kinetics using region-specific polyclonal antisera.
    Virology. 1990 Jul;177(1):159-74 PMID: 2353452
  11. Product review. New mammalian expression vectors.
    Nature. 1990 Nov 1;348(6296):91-2 PMID: 2234068
  12. Analysis of Sindbis virus promoter recognition in vivo, using novel vectors with two subgenomic mRNA promoters.
    J Virol. 1991 May;65(5):2501-10 PMID: 2016769
  13. Genetic manipulation of non-segmented negative-strand RNA viruses.
    J Gen Virol. 1996 Mar;77 ( Pt 3):381-9 PMID: 8601771
  14. Codon usage limitation in the expression of HIV-1 envelope glycoprotein.
    Curr Biol. 1996 Mar 1;6(3):315-24 PMID: 8805248
  15. Negative-strand RNA viruses: genetic engineering and applications.
    Proc Natl Acad Sci U S A. 1996 Oct 15;93(21):11354-8 PMID: 8876139
  16. Alphavirus-based expression vectors: strategies and applications.
    Proc Natl Acad Sci U S A. 1996 Oct 15;93(21):11371-7 PMID: 8876142
  17. Infectious Sindbis virus transient expression vectors for studying antigen processing and presentation.
    Proc Natl Acad Sci U S A. 1992 Apr 1;89(7):2679-83 PMID: 1372987
  18. Accuracy of wheat-germ RNA polymerase II. General enzymatic properties and effect of template conformational transition from right-handed B-DNA to left-handed Z-DNA.
    Eur J Biochem. 1992 May 15;206(1):49-58 PMID: 1587282
  19. Unequal human immunodeficiency virus type 1 reverse transcriptase error rates with RNA and DNA templates.
    Proc Natl Acad Sci U S A. 1992 Aug 1;89(15):6919-23 PMID: 1379727
  20. Expression and identification of hepatitis C virus polyprotein cleavage products.
    J Virol. 1993 Mar;67(3):1385-95 PMID: 7679746
  21. Sindbis virus expression vectors: packaging of RNA replicons by using defective helper RNAs.
    J Virol. 1993 Nov;67(11):6439-46 PMID: 8411346
  22. A cell line that expresses a reporter gene in response to infection by Sindbis virus: a prototype for detection of positive strand RNA viruses.
    Virology. 1994 Jan;198(1):381-4 PMID: 8259675
  23. Comparison of the effects of Sindbis virus and Sindbis virus replicons on host cell protein synthesis and cytopathogenicity in BHK cells.
    J Virol. 1994 Mar;68(3):1721-7 PMID: 8107233
  24. Processing in the hepatitis C virus E2-NS2 region: identification of p7 and two distinct E2-specific products with different C termini.
    J Virol. 1994 Aug;68(8):5063-73 PMID: 7518529
  25. Translation of Sindbis virus mRNA: effects of sequences downstream of the initiating codon.
    J Virol. 1994 Dec;68(12):8111-7 PMID: 7966601
  26. The alphaviruses: gene expression, replication, and evolution.
    Microbiol Rev. 1994 Sep;58(3):491-562 PMID: 7968923
  27. Fidelity of nucleic acid amplification with avian myeloblastosis virus reverse transcriptase and T7 RNA polymerase.
    Biotechniques. 1994 Dec;17(6):1077-80, 1083-5 PMID: 7532977
  28. Sindbis vectors suppress secretion of subviral particles of Japanese encephalitis virus from mammalian cells infected with SIN-JEV recombinants.
    Virology. 1995 May 10;209(1):155-66 PMID: 7747465
  29. Comparison of p56lck and p59fyn protein expression in thymocyte subsets, peripheral T cells, NK cells, and lymphoid cell lines.
    J Immunol. 1995 Nov 1;155(9):4236-40 PMID: 7594580
  30. A plasmid-based self-amplifying Sindbis virus vector.
    Hum Gene Ther. 1995 Sep;6(9):1161-7 PMID: 8527474
  31. Sindbis virus DNA-based expression vectors: utility for in vitro and in vivo gene transfer.
    J Virol. 1996 Jan;70(1):508-19 PMID: 8523564
  32. Cloning and expression of the gene for bacteriophage T7 RNA polymerase.
    Proc Natl Acad Sci U S A. 1984 Apr;81(7):2035-9 PMID: 6371808
  33. Subgenomic replicons of the flavivirus Kunjin: construction and applications.
    J Virol. 1997 Feb;71(2):1497-505 PMID: 8995675
  34. Tripping the switch fantastic: how a protein kinase cascade can convert graded inputs into switch-like outputs.
    Trends Biochem Sci. 1996 Dec;21(12):460-6 PMID: 9009826
  35. trans-Complementation of yellow fever virus NS1 reveals a role in early RNA replication.
    J Virol. 1997 Dec;71(12):9608-17 PMID: 9371625
  36. DNA immunization against herpes simplex virus: enhanced efficacy using a Sindbis virus-based vector.
    J Virol. 1998 Feb;72(2):950-8 PMID: 9444987
  37. Transcriptional fidelity and proofreading by RNA polymerase II.
    Cell. 1998 May 15;93(4):627-37 PMID: 9604937
  38. RNAs from two independently isolated defective interfering particles of Sindbis virus contain a cellular tRNA sequence at their 5' ends.
    Proc Natl Acad Sci U S A. 1983 Jun;80(11):3279-83 PMID: 6304704
  39. Translation of Sindbis virus mRNA: analysis of sequences downstream of the initiating AUG codon that enhance translation.
    J Virol. 1996 Feb;70(2):1182-90 PMID: 8551579
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1998-10-27
Pages
12989-94
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC23682
Subset
IM
Grants
NIAID NIH HHS · R37 AI024134 · United States
NIAID NIH HHS · AI11377 · United States
NIAID NIH HHS · AI24134 · United States
Corrections
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]