Home LiteratureArticle Details
PMID: 10398681 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana.

Genes & development ·Vol. 13 ·No. 13 ·1999-07-01 ·Pages 1678-91

Gray WM, del Pozo JC, Walker L, Hobbie L, Risseeuw E, Banks T, Crosby WL, Yang M, Ma H, Estelle M

Abstract

The plant hormone auxin regulates diverse aspects of plant growth and development. We report that in Arabidopsis, auxin response is dependent on a ubiquitin-ligase (E3) complex called SCFTIR1. The complex consists of proteins related to yeast Skp1p and Cdc53p called ASK and AtCUL1, respectively, as well as the F-box protein TIR1. Mutations in either ASK1 or TIR1 result in decreased auxin response. Further, overexpression of TIR1 promotes auxin response suggesting that SCFTIR1 is limiting for the response. These results provide new support for a model in which auxin action depends on the regulated proteolysis of repressor proteins.

MeSH Terms
Amino Acid Sequence Arabidopsis/drug effects,enzymology,genetics,growth & development Arabidopsis Proteins Gene Expression Regulation, Plant Indoleacetic Acids/pharmacology Molecular Sequence Data Peptide Synthases/genetics,physiology Plant Proteins/genetics,physiology Plant Roots/growth & development Recombinant Fusion Proteins/physiology SKP Cullin F-Box Protein Ligases Sequence Alignment
Chemicals
ASK1 protein, Arabidopsis Arabidopsis Proteins Indoleacetic Acids Plant Proteins Recombinant Fusion Proteins indoleacetic acid ASK2 protein, Arabidopsis SKP Cullin F-Box Protein Ligases Peptide Synthases
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Gray W M
Department of Biology, Indiana University, Bloomington, Indiana 47405, USA.
del Pozo J C
Walker L
Hobbie L
Risseeuw E
Banks T
Crosby W L
Yang M
Ma H
Estelle M
References (48)
48 references, click to expand
  1. The axr4 auxin-resistant mutants of Arabidopsis thaliana define a gene important for root gravitropism and lateral root initiation.
    Plant J. 1995 Feb;7(2):211-20 PMID: 7704045
  2. Genes regulating the plant cell cycle: isolation of a mitotic-like cyclin from Arabidopsis thaliana.
    Proc Natl Acad Sci U S A. 1992 Apr 15;89(8):3295-9 PMID: 1373494
  3. SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box.
    Cell. 1996 Jul 26;86(2):263-74 PMID: 8706131
  4. XYLOGENESIS: INITIATION, PROGRESSION, AND CELL DEATH.
    Annu Rev Plant Physiol Plant Mol Biol. 1996 Jun;47:299-325 PMID: 15012291
  5. Two auxin-responsive domains interact positively to induce expression of the early indoleacetic acid-inducible gene PS-IAA4/5.
    Proc Natl Acad Sci U S A. 1995 Apr 11;92(8):3483-7 PMID: 7724586
  6. Arabidopsis auxin-resistance gene AXR1 encodes a protein related to ubiquitin-activating enzyme E1.
    Nature. 1993 Jul 8;364(6433):161-4 PMID: 8321287
  7. Modification of yeast Cdc53p by the ubiquitin-related protein rub1p affects function of the SCFCdc4 complex.
    Genes Dev. 1998 Apr 1;12(7):914-26 PMID: 9531531
  8. Function of the ubiquitin-proteosome pathway in auxin response.
    Trends Plant Sci. 1999 Mar;4(3):107-112 PMID: 10322542
  9. Suppression of auxin signal transduction by a MAPK cascade in higher plants.
    Nature. 1998 Oct 15;395(6703):716-20 PMID: 9790195
  10. Glucocorticoid-resistant lymphoma cell variants that contain functional glucocorticoid receptors.
    Mol Cell Biol. 1987 Dec;7(12):4211-7 PMID: 2830485
  11. Characterization of two cDNAs that encode MAP kinase homologues in Arabidopsis thaliana and analysis of the possible role of auxin in activating such kinase activities in cultured cells.
    Plant J. 1994 Jan;5(1):111-22 PMID: 8130795
  12. NF-kappa B and Rel proteins: evolutionarily conserved mediators of immune responses.
    Annu Rev Immunol. 1998;16:225-60 PMID: 9597130
  13. Grr1 of Saccharomyces cerevisiae is connected to the ubiquitin proteolysis machinery through Skp1: coupling glucose sensing to gene expression and the cell cycle.
    EMBO J. 1997 Sep 15;16(18):5629-38 PMID: 9312022
  14. Cloning of a cDNA which encodes a novel ubiquitin-like protein.
    Biochem Biophys Res Commun. 1993 Aug 31;195(1):393-9 PMID: 8395831
  15. The SCFbeta-TRCP-ubiquitin ligase complex associates specifically with phosphorylated destruction motifs in IkappaBalpha and beta-catenin and stimulates IkappaBalpha ubiquitination in vitro.
    Genes Dev. 1999 Feb 1;13(3):270-83 PMID: 9990852
  16. Identification of the receptor component of the IkappaBalpha-ubiquitin ligase.
    Nature. 1998 Dec 10;396(6711):590-4 PMID: 9859996
  17. SUMO-1: Ubiquitin gains weight.
    Trends Cell Biol. 1997 Oct;7(10):408-13 PMID: 17708991
  18. Arabidopsis SKP1, a homologue of a cell cycle regulator gene, is predominantly expressed in meristematic cells.
    Planta. 1998 Mar;204(3):345-51 PMID: 9530878
  19. Protein ubiquitination involving an E1-E2-E3 enzyme ubiquitin thioester cascade.
    Nature. 1995 Jan 5;373(6509):81-3 PMID: 7800044
  20. High temperature promotes auxin-mediated hypocotyl elongation in Arabidopsis.
    Proc Natl Acad Sci U S A. 1998 Jun 9;95(12):7197-202 PMID: 9618562
  21. Changes in auxin response from mutations in an AUX/IAA gene.
    Science. 1998 Feb 27;279(5355):1371-3 PMID: 9478901
  22. Mutants of Saccharomyces cerevisiae unresponsive to cell division control by polypeptide mating hormone.
    J Cell Biol. 1980 Jun;85(3):811-22 PMID: 6993497
  23. F-box proteins are receptors that recruit phosphorylated substrates to the SCF ubiquitin-ligase complex.
    Cell. 1997 Oct 17;91(2):209-19 PMID: 9346238
  24. Protein interaction cloning in yeast: identification of mammalian proteins that react with the leucine zipper of Jun.
    Proc Natl Acad Sci U S A. 1992 Jul 1;89(13):5789-93 PMID: 1631061
  25. Combinatorial control in ubiquitin-dependent proteolysis: don't Skp the F-box hypothesis.
    Trends Genet. 1998 Jun;14(6):236-43 PMID: 9635407
  26. The ubiquitin-related protein RUB1 and auxin response in Arabidopsis.
    Science. 1998 Jun 12;280(5370):1760-3 PMID: 9624055
  27. A pathway for lateral root formation in Arabidopsis thaliana.
    Genes Dev. 1995 Sep 1;9(17):2131-42 PMID: 7657165
  28. Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene.
    Development. 1999 Feb;126(4):711-21 PMID: 9895319
  29. age Mutants of Arabidopsis exhibit altered auxin-regulated gene expression.
    Plant Cell. 1998 Oct;10(10):1649-62 PMID: 9761792
  30. Developmental expression of the arabidopsis cyclin gene cyc1At.
    Plant Cell. 1994 Dec;6(12):1763-74 PMID: 7866022
  31. COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility.
    Science. 1998 May 15;280(5366):1091-4 PMID: 9582125
  32. The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast grr1p.
    Genes Dev. 1998 Jan 15;12(2):198-207 PMID: 9436980
  33. Proteolysis and the G1-S transition: the SCF connection.
    Curr Opin Genet Dev. 1998 Feb;8(1):36-42 PMID: 9529603
  34. The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis.
    J Biol Chem. 1998 Dec 25;273(52):34976-82 PMID: 9857029
  35. Growth and development of the axr1 mutants of Arabidopsis.
    Plant Cell. 1990 Nov;2(11):1071-80 PMID: 1983791
  36. The Expression Pattern of the Tonoplast Intrinsic Protein gamma-TIP in Arabidopsis thaliana Is Correlated with Cell Enlargement.
    Plant Physiol. 1992 Dec;100(4):1633-9 PMID: 16653178
  37. A glucocorticoid-mediated transcriptional induction system in transgenic plants.
    Plant J. 1997 Mar;11(3):605-12 PMID: 9107046
  38. The SAR1 gene of Arabidopsis acts downstream of the AXR1 gene in auxin response.
    Development. 1997 Apr;124(8):1583-91 PMID: 9108374
  39. Genetic approaches to auxin action.
    Plant Cell Environ. 1994 Jun;17(6):525-40 PMID: 11541116
  40. A new NEDD8-ligating system for cullin-4A.
    Genes Dev. 1998 Aug 1;12(15):2263-8 PMID: 9694792
  41. A putative leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction.
    Cell. 1997 Sep 5;90(5):929-38 PMID: 9298904
  42. Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements.
    Plant Cell. 1997 Nov;9(11):1963-71 PMID: 9401121
  43. Two F-box/WD-repeat proteins Pop1 and Pop2 form hetero- and homo-complexes together with cullin-1 in the fission yeast SCF (Skp1-Cullin-1-F-box) ubiquitin ligase.
    Genes Cells. 1998 Nov;3(11):721-35 PMID: 9990507
  44. Detection of mrnas in sea urchin embryos by in situ hybridization using asymmetric RNA probes.
    Dev Biol. 1984 Feb;101(2):485-502 PMID: 6692991
  45. Early genes and auxin action.
    Plant Physiol. 1996 May;111(1):9-17 PMID: 8685277
  46. Fluorescence microscopy methods for yeast.
    Methods Cell Biol. 1989;31:357-435 PMID: 2476649
  47. There's the rub: a novel ubiquitin-like modification linked to cell cycle regulation.
    Genes Dev. 1998 Apr 1;12(7):901-7 PMID: 9531529
  48. The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana.
    J Mol Biol. 1995 Aug 25;251(4):533-49 PMID: 7658471
Article Info
Journal
Genes & development
Abbr.
Genes Dev
ISSN
0890-9369
Published
1999-07-01
Pages
1678-91
Language
English
Region
United States
NLM ID
8711660
PMCID
PMC316846
Subset
IM
Grants
NIGMS NIH HHS · F32 GM018680 · United States
NIGMS NIH HHS · R01 GM043644 · United States
NIGMS NIH HHS · GM 18680 · United States
NIGMS NIH HHS · GM43644 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]