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PMID: 10419955 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

areABC genes determine the catabolism of aryl esters in Acinetobacter sp. Strain ADP1.

Journal of bacteriology ·Vol. 181 ·No. 15 ·1999-08-00 ·Pages 4568-75

Jones RM, Collier LS, Neidle EL, Williams PA

Abstract

Acinetobacter sp. strain ADP1 is able to grow on a range of esters of aromatic alcohols, converting them to the corresponding aromatic carboxylic acids by the sequential action of three inducible enzymes: an areA-encoded esterase, an areB-encoded benzyl alcohol dehydrogenase, and an areC-encoded benzaldehyde dehydrogenase. The are genes, adjacent to each other on the chromosome and transcribed in the order areCBA, were located 3.5 kbp upstream of benK. benK, encoding a permease implicated in benzoate uptake, is at one end of the ben-cat supraoperonic cluster for benzoate catabolism by the beta-ketoadipate pathway. Two open reading frames which may encode a transcriptional regulator, areR, and a porin, benP, separate benK from areC. Each are gene was individually expressed to high specific activity in Escherichia coli. The relative activities against different substrates of the cloned enzymes were, within experimental error, identical to that of wild-type Acinetobacter sp. strain ADP1 grown on either benzyl acetate, benzyl alcohol, or 4-hydroxybenzyl alcohol as the carbon source. The substrate preferences of all three enzymes were broad, encompassing a range of substituted aromatic compounds and in the case of the AreA esterase, different carboxylic acids. The areA, areB, and areC genes were individually disrupted on the chromosome by insertion of a kanamycin resistance cassette, and the rates at which the resultant strains utilized substrates of the aryl ester catabolic pathway were severely reduced as determined by growth competitions between the mutant and wild-type strains.

MeSH Terms
Acinetobacter/enzymology,genetics Alcohol Oxidoreductases/genetics,metabolism Aldehyde Oxidoreductases/genetics,metabolism Amino Acid Sequence Chromosomes, Bacterial Cloning, Molecular Conserved Sequence Escherichia coli Esterases/genetics,metabolism Esters Gene Expression Regulation, Bacterial Gene Expression Regulation, Enzymologic Kinetics Molecular Sequence Data Plasmids Restriction Mapping Transcription, Genetic
Chemicals
Esters Alcohol Oxidoreductases benzyl alcohol dehydrogenase Aldehyde Oxidoreductases benzaldehyde dehydrogenase (NAD+) Esterases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Jones R M
School of Biological Sciences, University of Wales Bangor, Bangor, Gwynedd LL57 2UW, Wales, United Kingdom.
Collier L S
Neidle E L
Williams P A
References (35)
35 references, click to expand
  1. Interspecies transformation of Acinetobacter: genetic evidence for a ubiquitous genus.
    J Bacteriol. 1972 Nov;112(2):917-31 PMID: 4563985
  2. Involvement of glutamate 268 in the active site of human liver mitochondrial (class 2) aldehyde dehydrogenase as probed by site-directed mutagenesis.
    Biochemistry. 1995 Jan 10;34(1):237-43 PMID: 7819202
  3. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  4. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  5. Cloning and genetic organization of the pca gene cluster from Acinetobacter calcoaceticus.
    J Bacteriol. 1987 Jul;169(7):3168-74 PMID: 3036773
  6. Cloning and expression in Escherichia coli of Acinetobacter calcoaceticus genes for benzoate degradation.
    J Bacteriol. 1987 Dec;169(12):5496-503 PMID: 2824437
  7. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  8. The alpha/beta hydrolase fold.
    Protein Eng. 1992 Apr;5(3):197-211 PMID: 1409539
  9. Kinetic studies on benzyl alcohol dehydrogenase encoded by TOL plasmid pWWO. A member of the zinc-containing long chain alcohol dehydrogenase family.
    J Biol Chem. 1993 May 25;268(15):10842-50 PMID: 8496150
  10. The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains.
    J Bacteriol. 1993 Oct;175(19):6067-74 PMID: 8407777
  11. A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.
    Protein Sci. 1997 Mar;6(3):543-55 PMID: 9070437
  12. Directed introduction of DNA cleavage sites to produce a high-resolution genetic and physical map of the Acinetobacter sp. strain ADP1 (BD413UE) chromosome.
    Microbiology. 1997 Apr;143 ( Pt 4):1345-57 PMID: 9141698
  13. benK encodes a hydrophobic permease-like protein involved in benzoate degradation by Acinetobacter sp. strain ADP1.
    J Bacteriol. 1997 Sep;179(18):5943-6 PMID: 9294456
  14. Lipases and alpha/beta hydrolase fold.
    Methods Enzymol. 1997;284:85-107 PMID: 9379946
  15. Overlapping substrate specificities of benzaldehyde dehydrogenase (the xylC gene product) and 2-hydroxymuconic semialdehyde dehydrogenase (the xylG gene product) encoded by TOL plasmid pWW0 of Pseudomonas putida.
    J Bacteriol. 1995 Mar;177(5):1196-201 PMID: 7868591
  16. Investigation of the active site cysteine residue of rat liver mitochondrial aldehyde dehydrogenase by site-directed mutagenesis.
    Biochemistry. 1995 Feb 28;34(8):2592-8 PMID: 7873540
  17. Detection of alpha/beta-hydrolase fold in the cell surface esterases of Acinetobacter species using an analysis of 3D profiles.
    FEBS Lett. 1995 Sep 11;371(3):231-5 PMID: 7556598
  18. The beta-ketoadipate pathway and the biology of self-identity.
    Annu Rev Microbiol. 1996;50:553-90 PMID: 8905091
  19. XylUW, two genes at the start of the upper pathway operon of TOL plasmid pWW0, appear to play no essential part in determining its catabolic phenotype.
    Microbiology. 1997 Jan;143 ( Pt 1):101-7 PMID: 9025283
  20. A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: gene cloning and enzyme purification and characterization.
    Appl Environ Microbiol. 1998 Feb;64(2):486-91 PMID: 9464382
  21. Molecular characterization of benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase II of Acinetobacter calcoaceticus.
    Biochem J. 1998 Mar 15;330 ( Pt 3):1375-81 PMID: 9494109
  22. Proton transfer in benzyl alcohol dehydrogenase during catalysis: alternate proton-relay routes.
    Biochemistry. 1998 Mar 10;37(10):3305-11 PMID: 9521650
  23. Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator.
    J Bacteriol. 1998 May;180(9):2493-501 PMID: 9573203
  24. Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon.
    Proc Natl Acad Sci U S A. 1998 May 26;95(11):6419-24 PMID: 9600981
  25. Similarities between the antABC-encoded anthranilate dioxygenase and the benABC-encoded benzoate dioxygenase of Acinetobacter sp. strain ADP1.
    J Bacteriol. 1998 Sep;180(17):4466-74 PMID: 9721284
  26. The growth of micro-organisms in relation to their energy supply.
    J Gen Microbiol. 1960 Dec;23:457-69 PMID: 13687855
  27. Structure of a triclinic ternary complex of horse liver alcohol dehydrogenase at 2.9 A resolution.
    J Mol Biol. 1981 Mar 15;146(4):561-87 PMID: 7024556
  28. Esterase from the oil-degrading Acinetobacter lwoffii RAG-1: sequence analysis and over-expression in Escherichia coli.
    FEMS Microbiol Lett. 1993 Sep 15;112(3):275-80 PMID: 8224790
  29. Growth-phase-dependent expression of the lipolytic system of Acinetobacter calcoaceticus BD413: cloning of a gene encoding one of the esterases.
    J Gen Microbiol. 1993 Oct;139(10):2329-42 PMID: 8254303
  30. prrA, a putative response regulator involved in oxygen regulation of photosynthesis gene expression in Rhodobacter sphaeroides.
    J Bacteriol. 1994 Jan;176(1):32-43 PMID: 8282708
  31. Biochemical and molecular characterization of the Clostridium magnum acetoin dehydrogenase enzyme system.
    J Bacteriol. 1994 Jun;176(12):3614-30 PMID: 8206840
  32. Cross-regulation by XylR and DmpR activators of Pseudomonas putida suggests that transcriptional control of biodegradative operons evolves independently of catabolic genes.
    J Bacteriol. 1994 Aug;176(16):5052-8 PMID: 8051017
  33. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
    Nucleic Acids Res. 1994 Nov 11;22(22):4673-80 PMID: 7984417
  34. The pca-pob supraoperonic cluster of Acinetobacter calcoaceticus contains quiA, the structural gene for quinate-shikimate dehydrogenase.
    J Bacteriol. 1994 Dec;176(24):7659-66 PMID: 8002591
  35. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
    Gene. 1982 Oct;19(3):259-68 PMID: 6295879
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1999-08-00
Pages
4568-75
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC103588
Subset
IM
Databases
GENBANK
AF150928
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