Home LiteratureArticle Details
PMID: 106368 Published · ppublish English Journal Article

The primary transcript of the ribosomal repeating unit in yeast.

Nucleic acids research ·Vol. 6 ·No. 1 ·1979-01-00 ·Pages 27-39

Klootwijk J, de Jonge P, Planta RJ

Abstract

Endgroup analysis of 37S ribosomal precursor RNA from Saccharomyces carlsbergensis has revealed that the major 5' endgroup is ppA-Up, with a molar yield of 0.8. This shows that most, if not all, 37S RNA molecules have preserved a transcriptional initiation sequence. Analysis of the 3' terminus of 37S RNA has shown the presence of a uridine rich oligonucleotide, tentatively identified as U6-8-A-NOH. This long stretch of uridines at the 3' end of 37S RNA may represent a transcriptional termination site. The two sets of data on the terminal sequences suggest that 37S ribosomal precursor RNA, if not already spliced, is a primary transcription product. Since the 3' terminus of 26S rRNA, U-U-U-G-UOH., appears to be clearly different from the 3' end of 37S RNA, we conclude that 37S ribosomal precursor RNA contains additional nucleotides 3'-distal to the 26S rRNA sequence.

MeSH Terms
Base Sequence Oligoribonucleotides/analysis RNA, Ribosomal/biosynthesis,isolation & purification Ribonuclease T1 Ribonucleases Ribosomes/metabolism Saccharomyces/metabolism Transcription, Genetic
Chemicals
Oligoribonucleotides RNA, Ribosomal Ribonucleases Ribonuclease T1
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Klootwijk J
de Jonge P
Planta R J
References (29)
29 references, click to expand
  1. Isolation and sequence determination of the 3'-terminal regions of isotopically labelled RNA molecules.
    Nucleic Acids Res. 1974 May;1(5):653-71 PMID: 10793747
  2. Ribosomal precursor particles from yeast.
    Exp Cell Res. 1975 Jan;90(1):95-104 PMID: 1122947
  3. Structure and transcription specificity of yeast RNA polymerase A.
    Biochim Biophys Acta. 1975 Jun 16;395(2):179-90 PMID: 1138940
  4. Detailed analysis of the ribosomal RNA synthesis in yeast.
    Biochim Biophys Acta. 1975 Dec 4;414(2):115-25 PMID: 1191704
  5. The molecular weights of yeast ribosomal precursor RNAs.
    Mol Biol Rep. 1975 Dec;2(4):321-5 PMID: 1214784
  6. Sequence determination of Gp-rich oligonucleotides by means of the Kethoxal modification.
    FEBS Lett. 1976 Jul 1;66(1):77-81 PMID: 1278442
  7. Terminal nucleotide sequences of 17-S ribosomal RNA and its immediate precursor 18-S RNA in yeast.
    Eur J Biochem. 1977 Jan;72(2):361-9 PMID: 190001
  8. Triphosphate residues at the 5' ends of rRNA precursor and 5S RNA from Dictyostelium discoideum.
    Proc Natl Acad Sci U S A. 1978 Feb;75(2):740-4 PMID: 204930
  9. Sites of transcription initiation in vivo on Xenopus laevis ribosomal DNA.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5402-6 PMID: 271962
  10. Nucleotide sequence of the yeast 5S ribosomal RNA gene and adjacent putative control regions.
    Nature. 1977 Jun 16;267(5612):641-3 PMID: 327335
  11. Promotor region for yeast 5S ribosomal RNA.
    Nature. 1977 Jun 16;267(5612):643-5 PMID: 327336
  12. Synthesis and processing of ribosomal ribonucleic acid in eukaryotes.
    Biochem Soc Trans. 1977;5(2):462-6 PMID: 332551
  13. Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5453-7 PMID: 341157
  14. Structure of yeast phenylalanine-tRNA genes: an intervening DNA segment within the region coding for the tRNA.
    Proc Natl Acad Sci U S A. 1978 Jan;75(1):190-4 PMID: 343104
  15. Unique arrangement of coding sequences for 5 S, 5.8 S, 18 S and 25 S ribosomal RNA in Saccharomyces cerevisiae as determined by R-loop and hybridization analysis.
    J Mol Biol. 1978 Aug 15;123(3):387-404 PMID: 357737
  16. Secondary methylation of yeast ribosomal precursor RNA.
    Eur J Biochem. 1977 May 2;75(1):311-8 PMID: 405217
  17. Sequence of the 3'-terminal 21 nucleotides of yeast 17S ribosomal RNA.
    Nucleic Acids Res. 1977 Oct;4(10):3655-63 PMID: 412171
  18. Studies on the 3'-terminal sequences of the large ribosomal ribonucleic acid of different eukaryotes and those associated with "hidden" breaks in heart-dissociable insects 26S ribonucleic acid.
    Biochem J. 1974 Sep;141(3):617-25 PMID: 4219141
  19. Sequence and conformation of 5 S RNA from Chlorella cytoplasmic ribosomes: comparison with other 5 S RNA molecules.
    J Mol Biol. 1974 Aug 5;87(2):205-25 PMID: 4427367
  20. Ribosomal RNA synthesis in Saccharomyces cerevisiae.
    J Mol Biol. 1972 Mar 28;65(2):227-42 PMID: 4557192
  21. The nucleotide sequence of Saccharomyces cerevisiae 5.8 S ribosomal ribonucleic acid.
    J Biol Chem. 1973 Jun 10;248(11):3860-75 PMID: 4575197
  22. Chromatography of 32P-labelled oligonucleotides on thin layers of DEAE-cellulose.
    Eur J Biochem. 1969 Dec;11(2):395-9 PMID: 4902612
  23. Structural comparison of 17 S ribosomal RNA of yeast and its immediate precursor, 18 S RNA.
    FEBS Lett. 1972 Jul 15;24(1):93-7 PMID: 5086624
  24. A two-dimensional fractionation procedure for radioactive nucleotides.
    J Mol Biol. 1965 Sep;13(2):373-98 PMID: 5325727
  25. On the mechanism of the biosynthesis of ribosomal RNA in yeast.
    Biochim Biophys Acta. 1970 Dec 14;224(2):458-69 PMID: 5498077
  26. Terminal sequences of bacteriophage RNAs.
    Nature. 1968 Nov 9;220(5167):548-52 PMID: 5686725
  27. Ribosomal precursor RNA in Saccharomyces carlsbergensis.
    Eur J Biochem. 1967 Dec;3(2):248-58 PMID: 6082612
  28. Genetic organization of the ribosomal transcription units of the yeast Saccharomyces carlsbergensis.
    Nucleic Acids Res. 1978 Aug;5(8):2801-8 PMID: 693320
  29. Transcription specificity of yeast RNA polymerase A. Highly specific transcription in vitro of the homologous ribosomal transcription units.
    Eur J Biochem. 1977 Oct 3;79(2):579-88 PMID: 923568
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1979-01-00
Pages
27-39
Language
English
Region
England
NLM ID
0411011
PMCID
PMC327671
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]