Home LiteratureArticle Details
PMID: 10924144 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Attractant regulation of the aspartate receptor-kinase complex: limited cooperative interactions between receptors and effects of the receptor modification state.

Biochemistry ·Vol. 39 ·No. 31 ·2000-08-08 ·Pages 9486-93

Bornhorst JA, Falke JJ

Abstract

The manner by which the bacterial chemotaxis system responds to a wide range of attractant concentrations remains incompletely understood. In principle, positive cooperativity between chemotaxis receptors could explain the ability of bacteria to respond to extremely low attractant concentrations. By utilizing an in vitro receptor-coupled kinase assay, the attractant-dependent response curve has been measured for the Salmonella typhimurium aspartate chemoreceptor. The attractant chosen, alpha-methyl aspartate, was originally used to quantitate high receptor sensitivity at low attractant concentrations by Segall, Block, and Berg [(1986) Proc. Natl. Acad. Sci. U.S.A. 83, 8987-8991]. The attractant response curve exhibits limited positive cooperativity, yielding a Hill coefficient of 1.7-2.4, and this Hill coefficient is relatively independent of both the receptor modification state and the mole ratio of CheA to receptor. These results disfavor models in which there are strong cooperative interactions between large numbers of receptor dimers in an extensive receptor array. Instead, the results are consistent with cooperative interactions between a small number of coupled receptor dimers. Because the in vitro receptor-coupled kinase assay utilizes higher than native receptor densities arising from overexpression, the observed positive cooperativity may overestimate that present in native receptor populations. Such positive cooperativity between dimers is fully compatible with the negative cooperativity previously observed between the two symmetric ligand binding sites within a single dimer. The attractant affinity of the aspartate receptor is found to depend on the modification state of its covalent adaptation sites. Increasing the the level of modification decreases the apparent attractant affinity at least 10-fold in the in vitro receptor-coupled kinase assay. This observation helps explain the ability of the chemotaxis pathway to respond to a broad range of attractant concentrations in vivo.

MeSH Terms
Adaptation, Physiological Aspartate Kinase/metabolism,physiology Bacterial Proteins/genetics,metabolism Chemotaxis/physiology Escherichia coli/genetics,metabolism Escherichia coli Proteins Histidine Kinase Membrane Proteins/genetics,metabolism Methyl-Accepting Chemotaxis Proteins Models, Biological Models, Chemical Mutagenesis, Site-Directed Protein Kinases/metabolism,physiology Receptors, Amino Acid/metabolism,physiology Salmonella typhimurium/enzymology,genetics,metabolism,physiology Signal Transduction
Chemicals
Bacterial Proteins CheW protein, E coli Escherichia coli Proteins Membrane Proteins Methyl-Accepting Chemotaxis Proteins Receptors, Amino Acid aspartic acid receptor CheW protein, Bacteria Protein Kinases Histidine Kinase cheA protein, E coli Aspartate Kinase
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Bornhorst J A
Department of Chemistry and Biochemistry, University of Colorado at Boulder, 80309-0215, USA.
Falke J J
References (87)
87 references, click to expand
  1. Bacterial tactic responses.
    Adv Microb Physiol. 1999;41:229-89 PMID: 10500847
  2. Covalent modification regulates ligand binding to receptor complexes in the chemosensory system of Escherichia coli.
    Cell. 2000 Feb 4;100(3):357-65 PMID: 10676817
  3. An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells.
    Science. 2000 Mar 3;287(5458):1652-5 PMID: 10698740
  4. Chemotaxis in bacteria.
    Science. 1966 Aug 12;153(3737):708-16 PMID: 4957395
  5. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  6. Chemotaxis toward amino acids in Escherichia coli.
    J Bacteriol. 1972 Oct;112(1):315-26 PMID: 4562400
  7. The range of attractant concentrations for bacterial chemotaxis and the threshold and size of response over this range. Weber law and related phenomena.
    J Gen Physiol. 1973 Aug;62(2):203-23 PMID: 4578974
  8. Methylation of a membrane protein involved in bacterial chemotaxis.
    Proc Natl Acad Sci U S A. 1975 Oct;72(10):3939-43 PMID: 1105570
  9. Enzymatic deamidation of methyl-accepting chemotaxis proteins in Escherichia coli catalyzed by the cheB gene product.
    Proc Natl Acad Sci U S A. 1983 Jun;80(12):3599-603 PMID: 6304723
  10. Sensory adaptation in bacterial chemotaxis: regulation of demethylation.
    J Bacteriol. 1985 Sep;163(3):983-90 PMID: 3897203
  11. Purification and characterization of the aspartate chemoreceptor.
    J Biol Chem. 1985 Sep 25;260(21):11706-10 PMID: 2995346
  12. Kinetics of receptor modification. The multiply methylated aspartate receptors involved in bacterial chemotaxis.
    J Biol Chem. 1986 Aug 15;261(23):10814-20 PMID: 3015942
  13. Temporal comparisons in bacterial chemotaxis.
    Proc Natl Acad Sci U S A. 1986 Dec;83(23):8987-91 PMID: 3024160
  14. Phosphorylation of three proteins in the signaling pathway of bacterial chemotaxis.
    Cell. 1988 Apr 8;53(1):79-87 PMID: 3280143
  15. Assembly of an MCP receptor, CheW, and kinase CheA complex in the bacterial chemotaxis signal transduction pathway.
    Cell. 1992 Sep 18;70(6):975-82 PMID: 1326408
  16. Oligomerization of the cytoplasmic fragment from the aspartate receptor of Escherichia coli.
    Biochemistry. 1992 Oct 20;31(41):9904-11 PMID: 1390772
  17. Polar location of the chemoreceptor complex in the Escherichia coli cell.
    Science. 1993 Mar 19;259(5102):1717-23 PMID: 8456299
  18. Signal transduction schemes of bacteria.
    Cell. 1993 Jun 4;73(5):857-71 PMID: 8098993
  19. Assembly and function of a quaternary signal transduction complex monitored by surface plasmon resonance.
    Nature. 1993 Sep 23;365(6444):343-7 PMID: 8377825
  20. Structure of the Mg(2+)-bound form of CheY and mechanism of phosphoryl transfer in bacterial chemotaxis.
    Biochemistry. 1993 Dec 14;32(49):13375-80 PMID: 8257674
  21. Aspartate receptors of Escherichia coli and Salmonella typhimurium bind ligand with negative and half-of-the-sites cooperativity.
    Biochemistry. 1994 Jan 25;33(3):629-34 PMID: 8292590
  22. Attractant- and disulfide-induced conformational changes in the ligand binding domain of the chemotaxis aspartate receptor: a 19F NMR study.
    Biochemistry. 1994 May 24;33(20):6100-9 PMID: 7910759
  23. Signal transduction. Bringing the eukaryotes up to speed.
    Curr Biol. 1994 Mar 1;4(3):234-7 PMID: 7922328
  24. Purification and characterization of the wild-type and mutant carboxy-terminal domains of the Escherichia coli Tar chemoreceptor.
    J Bacteriol. 1988 Nov;170(11):5134-40 PMID: 3053644
  25. Transmembrane signal transduction in bacterial chemotaxis involves ligand-dependent activation of phosphate group transfer.
    Proc Natl Acad Sci U S A. 1989 Feb;86(4):1208-12 PMID: 2645576
  26. Adaptational "crosstalk" and the crucial role of methylation in chemotactic migration by Escherichia coli.
    Proc Natl Acad Sci U S A. 1989 Mar;86(5):1448-52 PMID: 2646634
  27. Control of transducer methylation levels in Escherichia coli: investigation of components essential for modulation of methylation and demethylation reactions.
    J Bacteriol. 1989 Jul;171(7):3609-18 PMID: 2661528
  28. Role of CheW protein in coupling membrane receptors to the intracellular signaling system of bacterial chemotaxis.
    Proc Natl Acad Sci U S A. 1989 Nov;86(22):8703-7 PMID: 2682657
  29. Quantitation of protein.
    Methods Enzymol. 1990;182:50-68 PMID: 2314256
  30. Effects of glutamines and glutamates at sites of covalent modification of a methyl-accepting transducer.
    J Bacteriol. 1990 Dec;172(12):7179-87 PMID: 2254280
  31. Tuning the responsiveness of a sensory receptor via covalent modification.
    J Biol Chem. 1991 Jan 25;266(3):1491-6 PMID: 1846357
  32. Reconstitution of the bacterial chemotaxis signal transduction system from purified components.
    J Biol Chem. 1991 May 25;266(15):9764-70 PMID: 1851755
  33. Efficient site-directed mutagenesis using uracil-containing DNA.
    Methods Enzymol. 1991;204:125-39 PMID: 1943776
  34. Three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand.
    Science. 1991 Nov 29;254(5036):1342-7 PMID: 1660187
  35. Correlation between phosphorylation of the chemotaxis protein CheY and its activity at the flagellar motor.
    Biochemistry. 1992 Feb 18;31(6):1821-6 PMID: 1737035
  36. Determination of transmembrane protein structure by disulfide cross-linking: the Escherichia coli Tar receptor.
    Proc Natl Acad Sci U S A. 1992 May 1;89(9):4144-8 PMID: 1315053
  37. Attenuation of sensory receptor signaling by covalent modification.
    Proc Natl Acad Sci U S A. 1992 Aug 1;89(15):6756-60 PMID: 1495964
  38. Deducing the organization of a transmembrane domain by disulfide cross-linking. The bacterial chemoreceptor Trg.
    J Biol Chem. 1994 Nov 25;269(47):29920-7 PMID: 7961989
  39. Transmembrane signaling by the aspartate receptor: engineered disulfides reveal static regions of the subunit interface.
    Biochemistry. 1995 Aug 1;34(30):9722-33 PMID: 7626643
  40. Lock on/off disulfides identify the transmembrane signaling helix of the aspartate receptor.
    J Biol Chem. 1995 Oct 13;270(41):24043-53 PMID: 7592603
  41. The response regulators CheB and CheY exhibit competitive binding to the kinase CheA.
    Biochemistry. 1995 Nov 14;34(45):14626-36 PMID: 7578071
  42. How bacteria sense and swim.
    Annu Rev Microbiol. 1995;49:489-522 PMID: 8561469
  43. Phosphotransfer and CheY-binding domains of the histidine autokinase CheA are joined by a flexible linker.
    Biochemistry. 1996 Jan 16;35(2):433-43 PMID: 8555213
  44. The cytoplasmic fragment of the aspartate receptor displays globally dynamic behavior.
    Biochemistry. 1996 Apr 23;35(16):5199-206 PMID: 8611504
  45. Molecular mechanism of transmembrane signaling by the aspartate receptor: a model.
    Proc Natl Acad Sci U S A. 1996 Mar 19;93(6):2545-50 PMID: 8637911
  46. Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy.
    Biochemistry. 1996 May 7;35(18):5633-40 PMID: 8639521
  47. Mutational analysis of a transmembrane segment in a bacterial chemoreceptor.
    J Bacteriol. 1996 Aug;178(15):4651-60 PMID: 8755897
  48. Molecular evolution of the C-terminal cytoplasmic domain of a superfamily of bacterial receptors involved in taxis.
    J Mol Biol. 1996 Aug 30;261(4):568-85 PMID: 8794877
  49. Methylation segments are not required for chemotactic signalling by cytoplasmic fragments of Tsr, the methyl-accepting serine chemoreceptor of Escherichia coli.
    Mol Microbiol. 1996 Feb;19(4):737-46 PMID: 8820644
  50. Signaling by the Escherichia coli aspartate chemoreceptor Tar with a single cytoplasmic domain per dimer.
    Science. 1996 Oct 18;274(5286):423-5 PMID: 8832891
  51. Detecting the conformational change of transmembrane signaling in a bacterial chemoreceptor by measuring effects on disulfide cross-linking in vivo.
    Proc Natl Acad Sci U S A. 1996 Oct 15;93(21):11546-51 PMID: 8876172
  52. Producing positive, negative, and no cooperativity by mutations at a single residue located at the subunit interface in the aspartate receptor of Salmonella typhimurium.
    Biochemistry. 1996 Nov 26;35(47):14782-92 PMID: 8942640
  53. Two-component signal transducers and MAPK cascades.
    Trends Biochem Sci. 1997 May;22(5):172-6 PMID: 9175476
  54. A signal transducer for aerotaxis in Escherichia coli.
    J Bacteriol. 1997 Jun;179(12):4075-9 PMID: 9190831
  55. A model of excitation and adaptation in bacterial chemotaxis.
    Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7263-8 PMID: 9207079
  56. Molecular mechanism of photosignaling by archaeal sensory rhodopsins.
    Annu Rev Biophys Biomol Struct. 1997;26:223-58 PMID: 9241419
  57. The serine chemoreceptor from Escherichia coli is methylated through an inter-dimer process.
    Biochemistry. 1997 Sep 30;36(39):11851-7 PMID: 9305977
  58. Methylation of the Escherichia coli chemotaxis receptors: intra- and interdimer mechanisms.
    Biochemistry. 1997 Oct 28;36(43):13441-8 PMID: 9341238
  59. High- and low-abundance chemoreceptors in Escherichia coli: differential activities associated with closely related cytoplasmic domains.
    J Bacteriol. 1997 Nov;179(21):6714-20 PMID: 9352921
  60. T-cell signaling: the importance of receptor clustering.
    Curr Biol. 1997 Oct 1;7(10):R640-4 PMID: 9368747
  61. Cysteine and disulfide scanning reveals a regulatory alpha-helix in the cytoplasmic domain of the aspartate receptor.
    J Biol Chem. 1997 Dec 26;272(52):32878-88 PMID: 9407066
  62. The two-component signaling pathway of bacterial chemotaxis: a molecular view of signal transduction by receptors, kinases, and adaptation enzymes.
    Annu Rev Cell Dev Biol. 1997;13:457-512 PMID: 9442881
  63. Chimeric chemoreceptors in Escherichia coli: signaling properties of Tar-Tap and Tap-Tar hybrids.
    J Bacteriol. 1998 Feb;180(4):914-20 PMID: 9473047
  64. Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain.
    Proc Natl Acad Sci U S A. 1998 Feb 17;95(4):1381-6 PMID: 9465023
  65. Bacterial chemotaxis: the five sensors of a bacterium.
    Curr Biol. 1998 Feb 26;8(5):R154-7 PMID: 9501057
  66. Self-association, cooperativity and supercooperativity of oxygen binding by hemoglobins.
    J Exp Biol. 1998 Apr;201(Pt 8):1073-84 PMID: 9510521
  67. Receptor clustering as a cellular mechanism to control sensitivity.
    Nature. 1998 May 7;393(6680):85-8 PMID: 9590695
  68. Chemotaxis receptor recognition by protein methyltransferase CheR.
    Nat Struct Biol. 1998 Jun;5(6):446-50 PMID: 9628482
  69. Variations on a molecular switch: transport and sensory signalling by archaeal rhodopsins.
    Mol Microbiol. 1998 Jun;28(6):1051-8 PMID: 9680197
  70. Mind your B's and R's: bacterial chemotaxis, signal transduction and protein recognition.
    Structure. 1998 Jul 15;6(7):809-13 PMID: 9687374
  71. Detection of a conserved alpha-helix in the kinase-docking region of the aspartate receptor by cysteine and disulfide scanning.
    J Biol Chem. 1998 Sep 25;273(39):25006-14 PMID: 9737956
  72. Stimulus response coupling in bacterial chemotaxis: receptor dimers in signalling arrays.
    Mol Microbiol. 1998 Nov;30(3):459-66 PMID: 9822812
  73. Identification of a site critical for kinase regulation on the central processing unit (CPU) helix of the aspartate receptor.
    Biochemistry. 1999 Jan 5;38(1):329-36 PMID: 9890914
  74. Structure of CheA, a signal-transducing histidine kinase.
    Cell. 1999 Jan 8;96(1):131-41 PMID: 9989504
  75. Structural analysis of bacterial chemotaxis proteins: components of a dynamic signaling system.
    J Struct Biol. 1998 Dec 15;124(2-3):189-200 PMID: 10049806
  76. Chemotaxis receptors: a progress report on structure and function.
    J Struct Biol. 1998 Dec 15;124(2-3):257-75 PMID: 10049811
  77. Inversion of thermosensing property of the bacterial receptor Tar by mutations in the second transmembrane region.
    J Mol Biol. 1999 Mar 12;286(5):1275-84 PMID: 10064695
  78. Conversion of a bacterial warm sensor to a cold sensor by methylation of a single residue in the presence of an attractant.
    Mol Microbiol. 1999 Apr;32(2):357-65 PMID: 10231491
  79. Enhanced function conferred on low-abundance chemoreceptor Trg by a methyltransferase-docking site.
    J Bacteriol. 1999 May;181(10):3164-71 PMID: 10322018
  80. Bacterial chemoreceptors: recent progress in structure and function.
    Mol Cells. 1999 Apr 30;9(2):115-8 PMID: 10340463
  81. Signaling domain of the aspartate receptor is a helical hairpin with a localized kinase docking surface: cysteine and disulfide scanning studies.
    Biochemistry. 1999 Jul 20;38(29):9317-27 PMID: 10413506
  82. The aspartate receptor cytoplasmic domain: in situ chemical analysis of structure, mechanism and dynamics.
    Structure. 1999 Jul 15;7(7):829-40 PMID: 10425684
  83. Four-helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor.
    Nature. 1999 Aug 19;400(6746):787-92 PMID: 10466731
  84. Heightened sensitivity of a lattice of membrane receptors.
    Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):10104-8 PMID: 10468569
  85. Identification of methylation sites and effects of phototaxis stimuli on transducer methylation in Halobacterium salinarum.
    J Bacteriol. 1999 Sep;181(18):5676-83 PMID: 10482508
  86. A piston model for transmembrane signaling of the aspartate receptor.
    Science. 1999 Sep 10;285(5434):1751-4 PMID: 10481014
  87. Efficient adaptational demethylation of chemoreceptors requires the same enzyme-docking site as efficient methylation.
    Proc Natl Acad Sci U S A. 1999 Sep 14;96(19):10667-72 PMID: 10485883
Article Info
Journal
Biochemistry
Abbr.
Biochemistry
ISSN
0006-2960
Published
2000-08-08
Pages
9486-93
Language
English
Region
United States
NLM ID
0370623
PMCID
PMC2890267
Subset
IM
Grants
NIGMS NIH HHS · R01 GM040731 · United States
NIGMS NIH HHS · R01 GM040731-13 · United States
NIGMS NIH HHS · GM R01-40731 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]