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PMID: 12520065 Published · ppublish English Journal Article

GlycoSuiteDB: a curated relational database of glycoprotein glycan structures and their biological sources. 2003 update.

Nucleic acids research ·Vol. 31 ·No. 1 ·2003-01-01 ·Pages 511-3

Cooper CA, Joshi HJ, Harrison MJ, Wilkins MR, Packer NH

Abstract

GlycoSuiteDB is an annotated and curated relational database of glycan structures reported in the literature. It contains information on the glycan type, core type, linkages and anomeric configurations, mass, composition and the analytical methods used by the researchers to determine the glycan structure. Native and recombinant sources are detailed, including species, tissue and/or cell type, cell line, strain, life stage, disease, and if known the protein to which the glycan structures are attached. There are links to SWISS-PROT/TrEMBL and PubMed where applicable. Recent developments include the implementation of searching by 2D structure and substructure, disease and reference. The database is updated twice a year, and now contains over 7650 entries. Access to GlycoSuiteDB is available at http://www.glycosuite.com.

MeSH Terms
Animals Carbohydrate Sequence Databases, Protein Glycoproteins/chemistry Humans Polysaccharides/chemistry
Chemicals
Glycoproteins Polysaccharides
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Cooper Catherine A
Proteome Systems Limited, 1/35-41 Waterloo Road, North Ryde, Sydney, NSW 2113, Australia. [email protected]
Joshi Hiren J
Harrison Mathew J
Wilkins Marc R
Packer Nicolle H
References (7)
7 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2003-01-01
Pages
511-3
Language
English
Region
England
NLM ID
0411011
PMCID
PMC165546
Subset
IM
Analysis Services
Analysis Services

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