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PMID: 12861021 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Acetylation-dependent chromatin reorganization by BRDT, a testis-specific bromodomain-containing protein.

Molecular and cellular biology ·Vol. 23 ·No. 15 ·2003-08-00 ·Pages 5354-65

Pivot-Pajot C, Caron C, Govin J, Vion A, Rousseaux S, Khochbin S

Abstract

The association between histone acetylation and replacement observed during spermatogenesis prompted us to consider the testis as a source for potential factors capable of remodelling acetylated chromatin. A systematic search of data banks for open reading frames encoding testis-specific bromodomain-containing proteins focused our attention on BRDT, a testis-specific protein of unknown function containing two bromodomains. BRDT specifically binds hyperacetylated histone H4 tail depending on the integrity of both bromodomains. Moreover, in somatic cells, the ectopic expression of BRDT triggered a dramatic reorganization of the chromatin only after induction of histone hyperacetylation by trichostatin A (TSA). We then defined critical domains of BRDT involved in its activity. Both bromodomains of BRDT, as well as flanking regions, were found indispensable for its histone acetylation-dependent remodelling activity. Interestingly, we also observed that recombinant BRDT was capable of inducing reorganization of the chromatin of isolated nuclei in vitro only when the nuclei were from TSA-treated cells. This assay also allowed us to show that the action of BRDT was ATP independent, suggesting a structural role for the protein in the remodelling of acetylated chromatin. This is the first demonstration of a large-scale reorganization of acetylated chromatin induced by a specific factor.

MeSH Terms
3T3 Cells Acetylation Adenosine Triphosphate/metabolism Amino Acid Sequence Animals Blotting, Northern Blotting, Western COS Cells Cell Nucleus/metabolism Chromatin/chemistry,metabolism Cloning, Molecular DNA, Complementary/metabolism Expressed Sequence Tags Genetic Vectors Histones/metabolism Humans Hydroxamic Acids/chemistry,pharmacology Male Mice Mice, Inbred BALB C Microscopy, Fluorescence Molecular Sequence Data Nuclear Proteins/chemistry,genetics Open Reading Frames Peptides/chemistry Plasmids/metabolism Protein Structure, Tertiary Spermatogenesis Subcellular Fractions/metabolism Testis/metabolism Tissue Distribution Transfection
Chemicals
BRDT protein, human Chromatin DNA, Complementary Histones Hydroxamic Acids Nuclear Proteins Peptides trichostatin A Adenosine Triphosphate
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Pivot-Pajot Christophe
Laboratoire de Biologie Moléculaire et Cellulaire de la Différenciation, INSERM U309, Equipe Chromatine et Expression des Gènes, Institut Albert Bonniot, Faculté de Médecine, Domaine de la Merci, 38706 La Tronche Cedex, France.
Caron Cécile
Govin Jérôme
Vion Alexandre
Rousseaux Sophie
Khochbin Saadi
References (43)
43 references, click to expand
  1. Growth and early postimplantation defects in mice deficient for the bromodomain-containing protein Brd4.
    Mol Cell Biol. 2002 Jun;22(11):3794-802 PMID: 11997514
  2. Bdf1, a yeast chromosomal protein required for sporulation.
    Mol Cell Biol. 1995 Jul;15(7):3685-96 PMID: 7791775
  3. Modeling apoptotic chromatin condensation in normal cell nuclei. Requirement for intranuclear mobility and actin involvement.
    J Biol Chem. 2002 Jun 14;277(24):21683-90 PMID: 11927586
  4. Reproductive cycle regulation of nuclear import, euchromatic localization, and association with components of Pol II mediator of a mammalian double-bromodomain protein.
    Mol Endocrinol. 2002 Aug;16(8):1727-37 PMID: 12145330
  5. A Mammalian bromodomain protein, brd4, interacts with replication factor C and inhibits progression to S phase.
    Mol Cell Biol. 2002 Sep;22(18):6509-20 PMID: 12192049
  6. Methylation of histone h3 at lysine 9 targets programmed DNA elimination in tetrahymena.
    Cell. 2002 Sep 20;110(6):701-11 PMID: 12297044
  7. Cellular memory and the histone code.
    Cell. 2002 Nov 1;111(3):285-91 PMID: 12419240
  8. Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.
    Cell. 2002 Nov 1;111(3):369-79 PMID: 12419247
  9. Deciphering the transcriptional histone acetylation code for a human gene.
    Cell. 2002 Nov 1;111(3):381-92 PMID: 12419248
  10. BRD4-NUT fusion oncogene: a novel mechanism in aggressive carcinoma.
    Cancer Res. 2003 Jan 15;63(2):304-7 PMID: 12543779
  11. Different sensitivities of bromodomain factors 1 and 2 to histone H4 acetylation.
    Mol Cell. 2003 Feb;11(2):353-63 PMID: 12620224
  12. Bromodomains mediate an acetyl-histone encoded antisilencing function at heterochromatin boundaries.
    Mol Cell. 2003 Feb;11(2):365-76 PMID: 12620225
  13. Hyperacetylation of histone H4 correlates with the terminal, transcriptionally inactive stages of spermatogenesis in rainbow trout.
    Dev Biol. 1982 Oct;93(2):404-15 PMID: 7141104
  14. Histone H4 hyperacetylation and rapid turnover of its acetyl groups in transcriptionally inactive rooster testis spermatids.
    Nucleic Acids Res. 1982 Dec 20;10(24):8049-59 PMID: 7162988
  15. Identification and characterization of BRDT: A testis-specific gene related to the bromodomain genes RING3 and Drosophila fsh.
    Genomics. 1997 Nov 1;45(3):529-34 PMID: 9367677
  16. Chromatin structure in granulocytes. A link between tight compaction and accumulation of a heterochromatin-associated protein (MENT).
    J Biol Chem. 1998 Jan 30;273(5):3082-9 PMID: 9446625
  17. The 40-kDa subunit of DNA fragmentation factor induces DNA fragmentation and chromatin condensation during apoptosis.
    Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8461-6 PMID: 9671700
  18. Structure and ligand of a histone acetyltransferase bromodomain.
    Nature. 1999 Jun 3;399(6735):491-6 PMID: 10365964
  19. The language of covalent histone modifications.
    Nature. 2000 Jan 6;403(6765):41-5 PMID: 10638745
  20. Expression of cancer-testis antigens in lung cancer: definition of bromodomain testis-specific gene (BRDT) as a new CT gene, CT9.
    Cancer Lett. 2000 Mar 31;150(2):155-64 PMID: 10704737
  21. Bromodomain factor 1 corresponds to a missing piece of yeast TFIID.
    Genes Dev. 2000 Apr 15;14(8):951-62 PMID: 10783167
  22. Structure and function of a human TAFII250 double bromodomain module.
    Science. 2000 May 26;288(5470):1422-5 PMID: 10827952
  23. A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition.
    Mol Cell Biol. 2000 Sep;20(17):6537-49 PMID: 10938129
  24. The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p.
    EMBO J. 2000 Nov 15;19(22):6141-9 PMID: 11080160
  25. Regulated hyperacetylation of core histones during mouse spermatogenesis: involvement of histone deacetylases.
    Eur J Cell Biol. 2000 Dec;79(12):950-60 PMID: 11152286
  26. Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins.
    Nature. 2001 Mar 1;410(6824):116-20 PMID: 11242053
  27. Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain.
    Nature. 2001 Mar 1;410(6824):120-4 PMID: 11242054
  28. Histone H1 diversity: bridging regulatory signals to linker histone function.
    Gene. 2001 Jun 13;271(1):1-12 PMID: 11410360
  29. Interaction between acetylated MyoD and the bromodomain of CBP and/or p300.
    Mol Cell Biol. 2001 Aug;21(16):5312-20 PMID: 11463815
  30. Acetyllysine-binding and function of bromodomain-containing proteins in chromatin.
    Front Biosci. 2001 Aug 1;6:D853-65 PMID: 11487465
  31. You bet-cha: a novel family of transcriptional regulators.
    Front Biosci. 2001 Aug 1;6:D1008-18 PMID: 11487468
  32. Translating the histone code.
    Science. 2001 Aug 10;293(5532):1074-80 PMID: 11498575
  33. Specificity of the HP1 chromo domain for the methylated N-terminus of histone H3.
    EMBO J. 2001 Sep 17;20(18):5232-41 PMID: 11566886
  34. Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.
    Science. 2002 Mar 15;295(5562):2080-3 PMID: 11859155
  35. Bromodomain: an acetyl-lysine binding domain.
    FEBS Lett. 2002 Feb 20;513(1):124-8 PMID: 11911891
  36. Structural basis of lysine-acetylated HIV-1 Tat recognition by PCAF bromodomain.
    Mol Cell. 2002 Mar;9(3):575-86 PMID: 11931765
  37. Hyperacetylation of histone H4 in rat testis spermatids.
    Exp Cell Res. 1984 May;152(1):91-7 PMID: 6714327
  38. Hyperacetylation of histone H4 promotes chromatin decondensation prior to histone replacement by protamines during spermatogenesis in rainbow trout.
    Nucleic Acids Res. 1984 Jun 11;12(11):4575-92 PMID: 6739291
  39. Highly acetylated H4 is associated with histone displacement in rat spermatids.
    Mol Reprod Dev. 1992 Mar;31(3):170-81 PMID: 1372808
  40. Method for 3D volumetric analysis of intranuclear fluorescence distribution in confocal microscopy.
    Comput Med Imaging Graph. 1993 May-Jun;17(3):189-200 PMID: 8402526
  41. Purification, culture, and fractionation of spermatogenic cells.
    Methods Enzymol. 1993;225:84-113 PMID: 8231890
  42. The yeast BDF1 gene encodes a transcription factor involved in the expression of a broad class of genes including snRNAs.
    Nucleic Acids Res. 1994 Dec 11;22(24):5332-40 PMID: 7816623
  43. Transcriptional synergy between Tat and PCAF is dependent on the binding of acetylated Tat to the PCAF bromodomain.
    EMBO J. 2002 Jun 3;21(11):2715-23 PMID: 12032084
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
2003-08-00
Pages
5354-65
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC165724
Subset
IM
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