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PMID: 1313573 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Structure-function relationship among T-cell receptors specific for lysozyme peptides bound to Ab or Abm-12 molecules.

Kobori JA, Hood L, Shastri N

Abstract

The alpha beta T-cell receptor (TCR) recognizes antigenic peptides bound to major histocompatibility complex (MHC) molecules. In contrast to the antibody combining site, for which the antigen contact or complementarity-determining residues (CDRs) have been precisely defined, the location and function of the corresponding CDR regions of the alpha and beta TCR chains are not known. To develop a model system for systematic analysis of the CDRs of the alpha beta TCR, we isolated a panel of murine T-cell clones that recognize a lysozyme peptide containing residues 74-88 bound to either Ab or Abm-12 MHC class II molecules. Although these two MHC molecules differ by only three amino acid residues within the A beta chain, each of the T-cell clones was specific for peptide bound to the self-MHC molecule and did not recognize the same peptide bound to the other MHC molecule. The structural basis for this exquisite ligand specificity of the TCRs was analyzed by isolation and characterization of alpha and beta chain genes from five closely related T-cell clones. Comparison of predicted amino acid sequences mapped the ligand specificity differences to residues present within the alpha chain variable region segment and the alpha and beta chain variable-joining region junction regions. Thus with current models of TCR-ligand interactions, the results suggest that residues 26-30 of the alpha chain variable region may constitute one of the CDR regions of the TCR.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Clone Cells Gene Rearrangement, T-Lymphocyte Histocompatibility Antigens Class II/immunology Mice Molecular Sequence Data Muramidase/chemistry,immunology Peptides/chemistry Receptors, Antigen, T-Cell, alpha-beta/chemistry,genetics Sequence Alignment Structure-Activity Relationship T-Lymphocytes/immunology
Chemicals
Histocompatibility Antigens Class II Peptides Receptors, Antigen, T-Cell, alpha-beta Muramidase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Kobori J A
Division of Biology, California Institute of Technology, Pasadena 91125.
Hood L
Shastri N
References (43)
43 references, click to expand
  1. Specific-primer-directed DNA sequencing.
    Anal Biochem. 1986 Apr;154(1):353-60 PMID: 3010776
  2. Structure and specificity of T cell receptor gamma/delta on major histocompatibility complex antigen-specific CD3+, CD4-, CD8- T lymphocytes.
    J Exp Med. 1988 Nov 1;168(5):1899-916 PMID: 2846743
  3. T-cell antigen receptor genes and T-cell recognition.
    Nature. 1988 Aug 4;334(6181):395-402 PMID: 3043226
  4. Structure-function analysis of the Abm12 beta mutation using site-directed mutagenesis and DNA-mediated gene transfer.
    J Immunol. 1987 Jul 15;139(2):629-38 PMID: 3110276
  5. T-cell receptor V beta use predicts reactivity and tolerance to Mlsa-encoded antigens.
    Nature. 1988 Mar 3;332(6159):40-5 PMID: 3126397
  6. The outline structure of the T-cell alpha beta receptor.
    EMBO J. 1988 Dec 1;7(12):3745-55 PMID: 3208747
  7. Immunology. Global or directed exocytosis?
    Nature. 1988 Mar 24;332(6162):306-7 PMID: 3258410
  8. A T cell clone expresses two T cell receptor alpha genes but uses one alpha beta heterodimer for allorecognition and self MHC-restricted antigen recognition.
    Cell. 1988 Oct 7;55(1):49-59 PMID: 3262424
  9. Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor.
    Nature. 1985 Aug 29-Sep 4;316(6031):783-7 PMID: 3839904
  10. A simple and very efficient method for generating cDNA libraries.
    Gene. 1983 Nov;25(2-3):263-9 PMID: 6198242
  11. Nucleotide sequence of mutant I-A beta bm12 gene is evidence for genetic exchange between mouse immune response genes.
    Nature. 1984 Apr 5-11;308(5959):551-3 PMID: 6324001
  12. Mouse T cell antigen receptor: structure and organization of constant and joining gene segments encoding the beta polypeptide.
    Cell. 1984 Jul;37(3):1101-10 PMID: 6611207
  13. Patterns of amino acids near signal-sequence cleavage sites.
    Eur J Biochem. 1983 Jun 1;133(1):17-21 PMID: 6852022
  14. Sequence analysis of peptides bound to MHC class II molecules.
    Nature. 1991 Oct 17;353(6345):622-7 PMID: 1656276
  15. The structure of HLA-B27 reveals nonamer self-peptides bound in an extended conformation.
    Nature. 1991 Sep 26;353(6342):321-5 PMID: 1922337
  16. Self-nonself discrimination by T cells.
    Science. 1990 Jun 15;248(4961):1369-73 PMID: 1972594
  17. T-lymphocyte recognition of antigen in association with gene products of the major histocompatibility complex.
    Annu Rev Immunol. 1985;3:237-61 PMID: 2415139
  18. Ia molecule-associated selectivity in T cell recognition of a 23-amino-acid peptide of lysozyme.
    J Exp Med. 1986 Sep 1;164(3):882-96 PMID: 2427637
  19. Restricted use of T cell receptor V genes in murine autoimmune encephalomyelitis raises possibilities for antibody therapy.
    Cell. 1988 Aug 12;54(4):577-92 PMID: 2456857
  20. Rearranged beta T cell receptor genes in a helper T cell clone specific for lysozyme: no correlation between V beta and MHC restriction.
    Cell. 1985 Apr;40(4):859-67 PMID: 2580639
  21. Identification and sequence of a fourth human T cell antigen receptor chain.
    Nature. 1987 Dec 10-16;330(6148):569-72 PMID: 2825032
  22. Genomic organization of the genes encoding mouse T-cell receptor alpha-chain.
    Nature. 1985 Aug 29-Sep 4;316(6031):832-6 PMID: 2993908
  23. Correlations between T-cell specificity and the structure of the antigen receptor.
    Nature. 1986 May 15-21;321(6067):219-26 PMID: 3012351
  24. Predominant use of a V alpha gene segment in mouse T-cell receptors for cytochrome c.
    Nature. 1986 Dec 18-31;324(6098):679-82 PMID: 3025740
  25. Self-tolerance eliminates T cells specific for Mls-modified products of the major histocompatibility complex.
    Nature. 1988 Mar 3;332(6159):35-40 PMID: 3126396
  26. Rearrangement and transcription of the beta-chain genes of the T-cell antigen receptor in different types of murine lymphocytes.
    Nature. 1985 Feb 21-27;313(6004):647-53 PMID: 3156277
  27. A hypothetical model of the foreign antigen binding site of class II histocompatibility molecules.
    Nature. 1988 Apr 28;332(6167):845-50 PMID: 3258651
  28. The molecular genetics of the T-cell antigen receptor and T-cell antigen recognition.
    Annu Rev Immunol. 1986;4:529-91 PMID: 3518750
  29. The structure, rearrangement and expression of D beta gene segments of the murine T-cell antigen receptor.
    Nature. 1984 Sep 27-Oct 3;311(5984):344-50 PMID: 6090932
  30. Genomic organization and sequence of T-cell receptor beta-chain constant- and joining-region genes.
    Nature. 1984 Aug 2-8;310(5976):387-91 PMID: 6336329
  31. Localization of a T-cell receptor diversity-region element.
    Nature. 1984 Aug 2-8;310(5976):421-3 PMID: 6611508
  32. The molecular basis of T-cell specificity.
    Annu Rev Immunol. 1990;8:65-82 PMID: 1693083
  33. A novel strategy for the generation of T cell lines lacking expression of endogenous alpha- and/or beta-chain T cell receptor genes.
    J Immunol. 1991 Apr 1;146(7):2095-101 PMID: 1826016
  34. The role of the T cell receptor in positive and negative selection of developing T cells.
    Science. 1990 Jun 15;248(4961):1335-41 PMID: 1972592
  35. Distinct recognition phenotypes exist for T cell clones specific for small peptide regions of proteins. Implications for the mechanisms underlying major histocompatibility complex-restricted antigen recognition and clonal deletion models of immune response gene defects.
    J Exp Med. 1985 Jul 1;162(1):332-45 PMID: 2409209
  36. The murine T-cell receptor uses a limited repertoire of expressed V beta gene segments.
    Nature. 1985 Aug 8-14;316(6028):517-23 PMID: 2412120
  37. The choice between two distinct T cell determinants within a 23-amino acid region of lysozyme depends on their structural context.
    J Immunol. 1986 Aug 1;137(3):911-5 PMID: 2424989
  38. Site-directed mutations in the VDJ junctional region of a T cell receptor beta chain cause changes in antigenic peptide recognition.
    Cell. 1988 Aug 12;54(4):473-84 PMID: 2456856
  39. The V beta-specific superantigen staphylococcal enterotoxin B: stimulation of mature T cells and clonal deletion in neonatal mice.
    Cell. 1989 Jan 13;56(1):27-35 PMID: 2521300
  40. Restriction fragment length polymorphisms of the mouse T-cell receptor gene families.
    Immunogenetics. 1989;29(3):191-201 PMID: 2564371
  41. Molecular genetic analysis of 178 I-Abm12-reactive T cells.
    J Exp Med. 1989 Jan 1;169(1):115-33 PMID: 2783331
  42. Selection of amino acid sequences in the beta chain of the T cell antigen receptor.
    Science. 1988 Mar 25;239(4847):1541-4 PMID: 2832942
  43. Molecular analysis of the hotspot of recombination in the murine major histocompatibility complex.
    Science. 1986 Oct 10;234(4773):173-9 PMID: 3018929
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1992-04-01
Pages
2940-4
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC48779
Subset
IM
Grants
NIAID NIH HHS · AI22274 · United States
NIAID NIH HHS · AI26604 · United States
Databases
GENBANK
M87844, M87845, M87846, M87847, M87848, M87849, M87850, M87851, M87852, M87853
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