Home LiteratureArticle Details
PMID: 1461730 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Analysis of the autonomous replication behavior in human cells of the dihydrofolate reductase putative chromosomal origin of replication.

Nucleic acids research ·Vol. 20 ·No. 22 ·1992-11-25 ·Pages 5971-8

Caddle MS, Calos MP

Abstract

Chinese hamster genomic DNA sequences from the region downstream of the dihydrofolate reductase (DHFR) gene reported to contain a chromosomal origin of bidirectional DNA replication (OBR-1) were tested for their ability to support autonomous DNA replication in human cells. A 13.3 kilobase fragment containing OBR-1 and surrounding sequences supported replication in short-term and long-term replication assays, while a 4.5 kb fragment containing OBR-1 did not support substantial replication in either assay. These results are consistent with our previous observations that large fragments of human DNA support replication, while smaller fragments are less efficient. The replication activities of plasmids containing OBR-1 were no greater than those of randomly chosen human fragments of similar size. Furthermore, two-dimensional gel analysis of plasmids containing OBR-1 indicated that initiation does not preferentially occur within the OBR-1 region. These results suggest that in the context of autonomous replication, the DHFR sequences tested do not contain genetic information specifying site-specific replication initiation. Possible implications of these results for chromosomal replication are discussed.

Related Genes
MeSH Terms
Animals Cell Line Chromosomes/metabolism Cloning, Molecular Cricetinae DNA Replication Electrophoresis, Gel, Two-Dimensional Humans Plasmids Replicon Restriction Mapping Tetrahydrofolate Dehydrogenase/genetics,metabolism
Chemicals
Tetrahydrofolate Dehydrogenase
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Caddle M S
Department of Genetics, Stanford University School of Medicine, CA 94305.
Calos M P
References (39)
39 references, click to expand
  1. Intramolecular DNA triplexes, bent DNA and DNA unwinding elements in the initiation region of an amplified dihydrofolate reductase replicon.
    J Mol Biol. 1990 Jan 5;211(1):19-33 PMID: 2299670
  2. Organization of replication of ribosomal DNA in Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 Nov;8(11):4927-35 PMID: 3062373
  3. Mapping replication units in animal cells.
    Cell. 1989 Jun 16;57(6):909-20 PMID: 2544294
  4. High-resolution mapping of replication fork movement through the amplified dihydrofolate reductase domain in CHO cells by in-gel renaturation analysis.
    Mol Cell Biol. 1989 Feb;9(2):523-31 PMID: 2710115
  5. The localization of replication origins on ARS plasmids in S. cerevisiae.
    Cell. 1987 Nov 6;51(3):463-71 PMID: 2822257
  6. Replication and supercoiling of simian virus 40 DNA in cell extracts from human cells.
    Mol Cell Biol. 1985 Aug;5(8):2051-60 PMID: 3018548
  7. Close association of a DNA replication origin and an ARS element on chromosome III of the yeast, Saccharomyces cerevisiae.
    Nucleic Acids Res. 1988 Jul 25;16(14A):6373-84 PMID: 3041374
  8. Yeast chromosome replication and segregation.
    Microbiol Rev. 1988 Dec;52(4):568-601 PMID: 3070325
  9. Autonomous replication of plasmids bearing monkey DNA origin-enriched sequences.
    Proc Natl Acad Sci U S A. 1987 Oct;84(19):6668-72 PMID: 3477798
  10. Regulated replication of DNA microinjected into eggs of Xenopus laevis.
    Cell. 1980 Oct;21(3):761-71 PMID: 6254667
  11. Evolution of chromosomal regions containing transfected and amplified dihydrofolate reductase sequences.
    Mol Cell Biol. 1983 Apr;3(4):699-711 PMID: 6855772
  12. Transformation of mammalian cells with genes from procaryotes and eucaryotes.
    Cell. 1979 Apr;16(4):777-85 PMID: 222468
  13. The ARS consensus sequence is required for chromosomal origin function in Saccharomyces cerevisiae.
    Mol Cell Biol. 1992 Oct;12(10):4305-13 PMID: 1406623
  14. Localization of a DNA replication origin and termination zone on chromosome III of Saccharomyces cerevisiae.
    Mol Cell Biol. 1992 Oct;12(10):4733-41 PMID: 1406657
  15. Initiation of DNA replication in the dihydrofolate reductase locus is confined to the early S period in CHO cells synchronized with the plant amino acid mimosine.
    Mol Cell Biol. 1992 Sep;12(9):3715-22 PMID: 1508178
  16. The HeLa Pur factor binds single-stranded DNA at a specific element conserved in gene flanking regions and origins of DNA replication.
    Mol Cell Biol. 1992 Mar;12(3):1257-65 PMID: 1545807
  17. Replication control of autonomously replicating human sequences.
    Nucleic Acids Res. 1991 Sep 25;19(18):5053-8 PMID: 1656387
  18. Emetine allows identification of origins of mammalian DNA replication by imbalanced DNA synthesis, not through conservative nucleosome segregation.
    EMBO J. 1991 Dec;10(13):4351-60 PMID: 1721870
  19. A position effect on the time of replication origin activation in yeast.
    Cell. 1992 Jan 24;68(2):333-9 PMID: 1733502
  20. Autonomous DNA replication in human cells is affected by the size and the source of the DNA.
    Mol Cell Biol. 1991 Apr;11(4):2263-72 PMID: 1900922
  21. Evidence suggesting that the ARS elements associated with silencers of the yeast mating-type locus HML do not function as chromosomal DNA replication origins.
    Mol Cell Biol. 1991 Oct;11(10):5346-55 PMID: 1922050
  22. Replication initiates at multiple locations on an autonomously replicating plasmid in human cells.
    Mol Cell Biol. 1991 Mar;11(3):1464-72 PMID: 1996103
  23. Autonomous replication of a DNA fragment containing the chromosomal replication origin of the human c-myc gene.
    Nucleic Acids Res. 1990 Mar 11;18(5):1233-42 PMID: 2157194
  24. Purification of RIP60 and RIP100, mammalian proteins with origin-specific DNA-binding and ATP-dependent DNA helicase activities.
    Mol Cell Biol. 1990 Dec;10(12):6225-35 PMID: 2174103
  25. The two faces of higher eukaryotic DNA replication origins.
    Cell. 1990 Sep 7;62(5):845-7 PMID: 2203534
  26. Isolation of the origin of replication associated with the amplified Chinese hamster dihydrofolate reductase domain.
    Proc Natl Acad Sci U S A. 1986 Oct;83(20):7790-4 PMID: 3094015
  27. Selective extraction of polyoma DNA from infected mouse cell cultures.
    J Mol Biol. 1967 Jun 14;26(2):365-9 PMID: 4291934
  28. Promoter-regulatory region of the major immediate early gene of human cytomegalovirus.
    Proc Natl Acad Sci U S A. 1984 Feb;81(3):659-63 PMID: 6322160
  29. Eukaryotic DNA segments capable of autonomous replication in yeast.
    Proc Natl Acad Sci U S A. 1980 Aug;77(8):4559-63 PMID: 6449009
  30. Replication initiates in a broad zone in the amplified CHO dihydrofolate reductase domain.
    Cell. 1990 Jun 15;61(6):1075-87 PMID: 2350784
  31. Ambiguities in results obtained with 2D gel replicon mapping techniques.
    Nucleic Acids Res. 1990 Feb 11;18(3):647-52 PMID: 2408018
  32. Isolation of human sequences that replicate autonomously in human cells.
    Mol Cell Biol. 1989 Mar;9(3):1026-33 PMID: 2542763
  33. The Epstein-Barr virus origin of plasmid replication, oriP, contains both the initiation and termination sites of DNA replication.
    Cell. 1989 Aug 11;58(3):527-35 PMID: 2547525
  34. Replication in the amplified dihydrofolate reductase domain in CHO cells may initiate at two distinct sites, one of which is a repetitive sequence element.
    Mol Cell Biol. 1989 Feb;9(2):532-40 PMID: 2710116
  35. A model for initiation at origins of DNA replication.
    Cell. 1988 Sep 23;54(7):915-8 PMID: 2843291
  36. Eukaryotic DNA replication.
    Annu Rev Biochem. 1986;55:733-71 PMID: 3017196
  37. Autonomous replicating sequences from mouse cells which can replicate in mouse cells in vivo and in vitro.
    Mol Cell Biol. 1987 Jan;7(1):1-6 PMID: 3031448
  38. An initiation site of DNA replication with transcriptional enhancer activity present upstream of the c-myc gene.
    EMBO J. 1988 Oct;7(10):3135-42 PMID: 3053161
  39. Identification of an origin of bidirectional DNA replication in mammalian chromosomes.
    Cell. 1990 Sep 7;62(5):955-65 PMID: 2393905
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1992-11-25
Pages
5971-8
Language
English
Region
England
NLM ID
0411011
PMCID
PMC334462
Subset
IM
Grants
NCI NIH HHS · CA 09302 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]