Home LiteratureArticle Details
PMID: 1495476 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Regulatory sequences for expressing genes in oomycete fungi.

Molecular & general genetics : MGG ·Vol. 234 ·No. 1 ·1992-07-00 ·Pages 138-46

Judelson HS, Tyler BM, Michelmore RW

Abstract

Promoter and terminator sequences from a range of species were tested for activity in the oomycetes, a group of lower fungi that bear an uncertain taxonomic affinity to other organisms and in which little is known of the sequences required for transcription. Transient assays, using the reporter gene beta-glucuronidase (GUS), were used to examine the function of these promoters and terminators in the plant pathogens Phytophthora infestans and P. megasperma f. sp. glycinea, and in the saprophytic water mold, Achlya ambisexualis. Oomycete promoters, isolated from the ham34 and hsp70 genes of Bremia lactucae and the actin gene of P. megasperma f. sp. glycinea, resulted in high levels of GUS accumulation in each of the three oomycetes. In contrast, little or no activity was detected when promoters from higher fungi (four ascomycetes and one basidiomycete), plants, and animals were tested. The terminator from the ham34 gene resulted in much higher levels of GUS accumulation than did others, although an oomycete terminator was not absolutely required for expression. Transcript mapping of RNA from stable transformants confirmed accurate initiation from the B. lactucae hsp70 promoter and termination within 3' ham34 sequences in P. infestans. Our results indicate that the transcriptional machinery of the oomycetes differs significantly from that of the higher fungi, but that enough conservation exists within the class to allow vectors developed from one oomycete species to be used for others.

Related Genes
GUS
MeSH Terms
Base Sequence DNA, Fungal Gene Expression Regulation, Fungal Genes, Fungal Glucuronidase/genetics Molecular Sequence Data Oomycetes/enzymology,genetics Phytophthora/genetics Promoter Regions, Genetic RNA, Fungal/metabolism Regulatory Sequences, Nucleic Acid Species Specificity Terminator Regions, Genetic Transcription, Genetic Transformation, Genetic
Chemicals
DNA, Fungal RNA, Fungal Glucuronidase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Judelson H S
NSF Center for Engineering Plants for Resistance Against Pathogens, University of California, Davis 95616.
Tyler B M
Michelmore R W
References (37)
37 references, click to expand
  1. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.
    Cell. 1977 Nov;12(3):721-32 PMID: 922889
  2. Sequences important for gene expression in filamentous fungi.
    Yeast. 1986 Dec;2(4):229-36 PMID: 3333455
  3. Distant upstream regulatory sequences control the level of expression of the am (GDH) locus of Neurospora crassa.
    Curr Genet. 1990 Jul;18(1):53-8 PMID: 2147126
  4. Transcription and expression of zein sequences in yeast under natural plant or yeast promoters.
    EMBO J. 1986 Mar;5(3):459-65 PMID: 16453671
  5. The promoter of the glucoamylase-encoding gene of Aspergillus niger functions in Ustilago maydis.
    Gene. 1990 Apr 16;88(2):259-62 PMID: 2112106
  6. RNA metabolism: strategies for regulation in the heat shock response.
    Trends Genet. 1990 Jul;6(7):223-7 PMID: 1697106
  7. Heat shock factor and the heat shock response.
    Cell. 1991 May 3;65(3):363-6 PMID: 2018972
  8. Evolutionary conservation of transcriptional machinery between yeast and plants as shown by the efficient expression from the CaMV 35S promoter and 35S terminator.
    Curr Genet. 1990 Jun;17(6):473-9 PMID: 2202523
  9. Efficient cloning of genes of Neurospora crassa.
    Proc Natl Acad Sci U S A. 1986 Jul;83(13):4869-73 PMID: 16593723
  10. Eukaryotic transcriptional regulatory proteins.
    Annu Rev Biochem. 1989;58:799-839 PMID: 2673023
  11. Transcription from maize storage protein gene promoters in yeast.
    EMBO J. 1984 Nov;3(11):2467-71 PMID: 6096123
  12. Cell wall chemistry, morphogenesis, and taxonomy of fungi.
    Annu Rev Microbiol. 1968;22:87-108 PMID: 4879523
  13. Highly abundant and stage-specific mRNAs in the obligate pathogen Bremia lactucae.
    Mol Plant Microbe Interact. 1990 Jul-Aug;3(4):225-32 PMID: 2131094
  14. Cosmid vectors for rapid genomic walking, restriction mapping, and gene transfer.
    Proc Natl Acad Sci U S A. 1987 Apr;84(8):2160-4 PMID: 3031668
  15. Expression of the Escherichia coli beta-glucuronidase gene in industrial and phytopathogenic filamentous fungi.
    Curr Genet. 1989 Mar;15(3):177-80 PMID: 2504501
  16. Genetic transformation of the plant pathogens Phytophthora capsici and Phytophthora parasitica.
    Nucleic Acids Res. 1991 Aug 11;19(15):4273-8 PMID: 1651483
  17. Recombinant DNA in filamentous fungi: progress and prospects.
    Crit Rev Biotechnol. 1987;6(4):357-93 PMID: 3333340
  18. Expression of phaseolin cDNA genes in yeast under control of natural plant DNA sequences.
    Proc Natl Acad Sci U S A. 1985 Jan;82(2):334-8 PMID: 16593534
  19. New concepts of kingdoms or organisms. Evolutionary relations are better represented by new classifications than by the traditional two kingdoms.
    Science. 1969 Jan 10;163(3863):150-60 PMID: 5762760
  20. A wide variety of DNA sequences can functionally replace a yeast TATA element for transcriptional activation.
    Genes Dev. 1990 Apr;4(4):636-45 PMID: 2163345
  21. Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins.
    Science. 1989 Jul 28;245(4916):371-8 PMID: 2667136
  22. Gene transfer system for the phytopathogenic fungus Ustilago maydis.
    Proc Natl Acad Sci U S A. 1988 Feb;85(3):865-9 PMID: 2829206
  23. DNA-mediated transformation in the aquatic filamentous fungus Achlya ambisexualis.
    J Gen Microbiol. 1988 Jul;134(7):2019-28 PMID: 3246595
  24. RNA polymerase B (II) and general transcription factors.
    Annu Rev Biochem. 1990;59:711-54 PMID: 2197989
  25. Transformation of lettuce (Lactuca sativa) mediated by Agrobacterium tumefaciens.
    Plant Cell Rep. 1987 Dec;6(6):439-42 PMID: 24248927
  26. Yeast TATA-binding protein TFIID binds to TATA elements with both consensus and nonconsensus DNA sequences.
    Proc Natl Acad Sci U S A. 1989 Aug;86(15):5718-22 PMID: 2569738
  27. Expression of genes in yeast using the ADCI promoter.
    Methods Enzymol. 1983;101:192-201 PMID: 6310322
  28. Transformation of the oomycete pathogen, Phytophthora infestans.
    Mol Plant Microbe Interact. 1991 Nov-Dec;4(6):602-7 PMID: 1804404
  29. TATA-dependent and TATA-independent function of the basal and heat shock elements of a human hsp70 promoter.
    Mol Cell Biol. 1990 Apr;10(4):1319-28 PMID: 2320000
  30. The single-copy actin gene of Phytophthora megasperma encodes a protein considerably diverged from any other known actin.
    Plant Mol Biol. 1990 Mar;14(3):415-22 PMID: 2102822
  31. Ubiquitin extension proteins of Arabidopsis thaliana. Structure, localization, and expression of their promoters in transgenic tobacco.
    J Biol Chem. 1990 Jul 25;265(21):12486-93 PMID: 2165066
  32. Actin in the oomycetous fungus Phytophthora infestans is the product of several genes.
    Gene. 1991 Apr;100:105-12 PMID: 2055461
  33. Molecular mechanisms of transcriptional regulation in yeast.
    Annu Rev Biochem. 1989;58:1051-77 PMID: 2673007
  34. Transformation of yeast spheroplasts without cell fusion.
    Anal Biochem. 1987 Jun;163(2):391-7 PMID: 3310730
  35. Structure and expression of a gene encoding heat-shock protein Hsp70 from the Oomycete fungus Bremia lactucae.
    Gene. 1989 Jul 15;79(2):207-17 PMID: 2792764
  36. The complete nucleotide sequence of the Neurospora crassa am (NADP-specific glutamate dehydrogenase) gene.
    Gene. 1983 Dec;26(2-3):253-60 PMID: 6231215
  37. Sterile host yeasts (SHY): a eukaryotic system of biological containment for recombinant DNA experiments.
    Gene. 1979 Dec;8(1):17-24 PMID: 395030
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1992-07-00
Pages
138-46
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]