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PMID: 16193328 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

Roles of SGS1, MUS81, and RAD51 in the repair of lagging-strand replication defects in Saccharomyces cerevisiae.

Current genetics ·Vol. 48 ·No. 4 ·2005-10-00 ·Pages 213-25

Ii M, Brill SJ

Abstract

Yeast cells lacking the SGS1 DNA helicase and the MUS81 structure-specific endonuclease display a synthetic lethality that is suppressed by loss of the RAD51 recombinase. This epistatic interaction suggests that the primary function of SGS1 or MUS81, or both genes, is downstream of RAD51. To identify RAD51-independent functions of SGS1 and MUS81, a synthetic-lethal screen was performed on the sgs1 mus81 rad51triple mutant. We found that mutation of RNH202, which encodes a subunit of the hetero-trimeric RNase H2, generates a profound synthetic-sickness in this background. RNase H2 is thought to play a non-essential role in Okazaki fragment maturation. Cells lacking RNH202 showed synthetic growth defects when combined with either mus81 or sgs1 alone. But, whereas the loss of RAD51 had little effect on rnh202 sgs1 double mutants, it strongly inhibited the growth of rnh202 mus81 cells. These data indicate that the primary function of SGS1, but not MUS81, is downstream of RAD51. SGS1 must have some RAD51-independent function, however, since the growth of rnh202 mus81 rad51cells was further compromised by the loss of SGS1. Consistent with these results, we show that rnh202 cells display a sensitivity to DNA-damaging agents that is exacerbated in the absence of RAD51 or MUS81. These data support a model in which defects in lagging-strand replication are repaired by the Mus81 endonuclease or through a pathway dependent on Rad51 and Sgs1.

MeSH Terms
DNA Helicases/genetics DNA Repair/genetics DNA Replication/genetics DNA-Binding Proteins/genetics Endonucleases/genetics Genomic Instability/genetics Models, Genetic Mutagens/pharmacology Mutant Proteins/metabolism Rad51 Recombinase/genetics RecQ Helicases Ribonuclease H/genetics,metabolism Saccharomyces cerevisiae/genetics Saccharomyces cerevisiae Proteins/genetics Telomere/physiology
Chemicals
DNA-Binding Proteins Mutagens Mutant Proteins Saccharomyces cerevisiae Proteins RAD51 protein, S cerevisiae Rad51 Recombinase Endonucleases MUS81 protein, S cerevisiae ribonuclease HII Ribonuclease H SGS1 protein, S cerevisiae DNA Helicases RecQ Helicases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Ii Miki
Department of Molecular Biology and Biochemistry, Rutgers University, 679 Hoes Lane, Piscataway, NJ 08854, USA.
Brill Steven J
References (70)
70 references, click to expand
  1. The protein components and mechanism of eukaryotic Okazaki fragment maturation.
    Crit Rev Biochem Mol Biol. 2003;38(5):433-52 PMID: 14693726
  2. RPA regulates telomerase action by providing Est1p access to chromosome ends.
    Nat Genet. 2004 Jan;36(1):46-54 PMID: 14702040
  3. RNase H2 of Saccharomyces cerevisiae is a complex of three proteins.
    Nucleic Acids Res. 2004;32(2):407-14 PMID: 14734815
  4. The involvement of Srs2 in post-replication repair and homologous recombination in fission yeast.
    Nucleic Acids Res. 2004;32(4):1480-91 PMID: 14993467
  5. Regulation of telomerase by telomeric proteins.
    Annu Rev Biochem. 2004;73:177-208 PMID: 15189140
  6. Role of DNA replication proteins in double-strand break-induced recombination in Saccharomyces cerevisiae.
    Mol Cell Biol. 2004 Aug;24(16):6891-9 PMID: 15282291
  7. DNA repair by a Rad22-Mus81-dependent pathway that is independent of Rhp51.
    Nucleic Acids Res. 2004;32(18):5570-81 PMID: 15486206
  8. 5-Fluoroorotic acid as a selective agent in yeast molecular genetics.
    Methods Enzymol. 1987;154:164-75 PMID: 3323810
  9. DNA topoisomerase-targeting antitumor drugs can be studied in yeast.
    Proc Natl Acad Sci U S A. 1988 Oct;85(20):7501-5 PMID: 2845409
  10. Elevated recombination rates in transcriptionally active DNA.
    Cell. 1989 Feb 24;56(4):619-30 PMID: 2645056
  11. A hyper-recombination mutation in S. cerevisiae identifies a novel eukaryotic topoisomerase.
    Cell. 1989 Jul 28;58(2):409-19 PMID: 2546682
  12. Isolation and characterization of a second RNase H (RNase HII) of Escherichia coli K-12 encoded by the rnhB gene.
    Proc Natl Acad Sci U S A. 1990 Nov;87(21):8587-91 PMID: 2172991
  13. The hyper-gene conversion hpr5-1 mutation of Saccharomyces cerevisiae is an allele of the SRS2/RADH gene.
    Genetics. 1991 Jan;127(1):75-85 PMID: 1849857
  14. The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase.
    Mol Cell Biol. 1994 Dec;14(12):8391-8 PMID: 7969174
  15. Use of a chromosomal inverted repeat to demonstrate that the RAD51 and RAD52 genes of Saccharomyces cerevisiae have different roles in mitotic recombination.
    Genetics. 1994 Nov;138(3):587-95 PMID: 7851757
  16. Sgs1: a eukaryotic homolog of E. coli RecQ that interacts with topoisomerase II in vivo and is required for faithful chromosome segregation.
    Cell. 1995 Apr 21;81(2):253-60 PMID: 7736577
  17. Disruption of the Crithidia fasciculata RNH1 gene results in the loss of two active forms of ribonuclease H.
    Nucleic Acids Res. 1995 Jul 11;23(13):2526-30 PMID: 7630731
  18. The Bloom's syndrome gene product is homologous to RecQ helicases.
    Cell. 1995 Nov 17;83(4):655-66 PMID: 7585968
  19. Positional cloning of the Werner's syndrome gene.
    Science. 1996 Apr 12;272(5259):258-62 PMID: 8602509
  20. Mutations in the RNA polymerase II transcription machinery suppress the hyperrecombination mutant hpr1 delta of Saccharomyces cerevisiae.
    Genetics. 1996 Mar;142(3):749-59 PMID: 8849885
  21. SGS1, a homologue of the Bloom's and Werner's syndrome genes, is required for maintenance of genome stability in Saccharomyces cerevisiae.
    Genetics. 1996 Nov;144(3):935-45 PMID: 8913739
  22. A novel Rap1p-interacting factor, Rif2p, cooperates with Rif1p to regulate telomere length in Saccharomyces cerevisiae.
    Genes Dev. 1997 Mar 15;11(6):748-60 PMID: 9087429
  23. Accelerated aging and nucleolar fragmentation in yeast sgs1 mutants.
    Science. 1997 Aug 29;277(5330):1313-6 PMID: 9271578
  24. Role of Schizosaccharomyces pombe RecQ homolog, recombination, and checkpoint genes in UV damage tolerance.
    Mol Cell Biol. 1997 Dec;17(12):6868-75 PMID: 9372918
  25. Mcm1 regulates donor preference controlled by the recombination enhancer in Saccharomyces mating-type switching.
    Genes Dev. 1998 Jun 1;12(11):1726-37 PMID: 9620858
  26. Bloom's and Werner's syndrome genes suppress hyperrecombination in yeast sgs1 mutant: implication for genomic instability in human diseases.
    Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8733-8 PMID: 9671747
  27. Homologous recombination is required for the viability of rad27 mutants.
    Nucleic Acids Res. 1998 Dec 15;26(24):5589-95 PMID: 9837987
  28. Identification of the genes encoding Mn2+-dependent RNase HII and Mg2+-dependent RNase HIII from Bacillus subtilis: classification of RNases H into three families.
    Biochemistry. 1999 Jan 12;38(2):605-18 PMID: 9888800
  29. The essential role of yeast topoisomerase III in meiosis depends on recombination.
    EMBO J. 1999 Mar 15;18(6):1701-11 PMID: 10075939
  30. Dna2 mutants reveal interactions with Dna polymerase alpha and Ctf4, a Pol alpha accessory factor, and show that full Dna2 helicase activity is not essential for growth.
    Genetics. 1999 Apr;151(4):1459-70 PMID: 10101169
  31. Mutations in RECQL4 cause a subset of cases of Rothmund-Thomson syndrome.
    Nat Genet. 1999 May;22(1):82-4 PMID: 10319867
  32. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae.
    Microbiol Mol Biol Rev. 1999 Jun;63(2):349-404 PMID: 10357855
  33. Defending genome integrity during DNA replication: a proposed role for RecQ family helicases.
    Bioessays. 1999 Apr;21(4):286-94 PMID: 10377891
  34. The ability of Sgs1 to interact with DNA topoisomerase III is essential for damage-induced recombination.
    DNA Repair (Amst). 2005 Feb 3;4(2):191-201 PMID: 15590327
  35. A postsynaptic role for Rhp55/57 that is responsible for cell death in Deltarqh1 mutants following replication arrest in Schizosaccharomyces pombe.
    Genetics. 2005 Jun;170(2):519-31 PMID: 15802523
  36. Saccharomyces cerevisiae RNase H(35) functions in RNA primer removal during lagging-strand DNA synthesis, most efficiently in cooperation with Rad27 nuclease.
    Mol Cell Biol. 1999 Dec;19(12):8361-71 PMID: 10567561
  37. The Bloom's syndrome gene product interacts with topoisomerase III.
    J Biol Chem. 2000 Mar 31;275(13):9636-44 PMID: 10734115
  38. Bipartite structure of the SGS1 DNA helicase in Saccharomyces cerevisiae.
    Genetics. 2000 Mar;154(3):1101-14 PMID: 10757756
  39. Homologous recombination is responsible for cell death in the absence of the Sgs1 and Srs2 helicases.
    Nat Genet. 2000 Jun;25(2):192-4 PMID: 10835635
  40. MUS81 encodes a novel helix-hairpin-helix protein involved in the response to UV- and methylation-induced DNA damage in Saccharomyces cerevisiae.
    Mol Gen Genet. 2000 Jun;263(5):812-27 PMID: 10905349
  41. Mutational spectrum analysis of RNase H(35) deficient Saccharomyces cerevisiae using fluorescence-based directed termination PCR.
    Nucleic Acids Res. 2000 Sep 15;28(18):3649-56 PMID: 10982888
  42. The absence of ribonuclease H1 or H2 alters the sensitivity of Saccharomyces cerevisiae to hydroxyurea, caffeine and ethyl methanesulphonate: implications for roles of RNases H in DNA replication and repair.
    Genes Cells. 2000 Oct;5(10):789-802 PMID: 11029655
  43. SGS1, the Saccharomyces cerevisiae homologue of BLM and WRN, suppresses genome instability and homeologous recombination.
    Nat Genet. 2001 Jan;27(1):113-6 PMID: 11138010
  44. Requirement for three novel protein complexes in the absence of the Sgs1 DNA helicase in Saccharomyces cerevisiae.
    Genetics. 2001 Jan;157(1):103-18 PMID: 11139495
  45. Involvement of SGS1 in DNA damage-induced heteroallelic recombination that requires RAD52 in Saccharomyces cerevisiae.
    Mol Gen Genet. 2001 Jan;264(5):702-8 PMID: 11212925
  46. Structural biochemistry of a type 2 RNase H: RNA primer recognition and removal during DNA replication.
    J Mol Biol. 2001 Mar 23;307(2):541-56 PMID: 11254381
  47. Potential role for the BLM helicase in recombinational repair via a conserved interaction with RAD51.
    J Biol Chem. 2001 Jun 1;276(22):19375-81 PMID: 11278509
  48. RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes.
    Nature. 2001 Jul 26;412(6845):456-61 PMID: 11473323
  49. Drosophila RNase H1 is essential for development but not for proliferation.
    Mol Genet Genomics. 2001 Jul;265(5):771-7 PMID: 11523794
  50. Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease.
    Genes Dev. 2001 Oct 15;15(20):2730-40 PMID: 11641278
  51. Mus81-Eme1 are essential components of a Holliday junction resolvase.
    Cell. 2001 Nov 16;107(4):537-48 PMID: 11719193
  52. Systematic genetic analysis with ordered arrays of yeast deletion mutants.
    Science. 2001 Dec 14;294(5550):2364-8 PMID: 11743205
  53. Yeast Tdp1 and Rad1-Rad10 function as redundant pathways for repairing Top1 replicative damage.
    Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13669-74 PMID: 12368472
  54. Mutations in homologous recombination genes rescue top3 slow growth in Saccharomyces cerevisiae.
    Genetics. 2002 Oct;162(2):647-62 PMID: 12399378
  55. The severe slow growth of Deltasrs2 Deltarqh1 in Schizosaccharomyces pombe is suppressed by loss of recombination and checkpoint genes.
    Nucleic Acids Res. 2002 Nov 1;30(21):4781-92 PMID: 12409469
  56. Alternate pathways involving Sgs1/Top3, Mus81/ Mms4, and Srs2 prevent formation of toxic recombination intermediates from single-stranded gaps created by DNA replication.
    Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16887-92 PMID: 12475932
  57. Excision of misincorporated ribonucleotides in DNA by RNase H (type 2) and FEN-1 in cell-free extracts.
    Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16654-9 PMID: 12475934
  58. A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage.
    Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16934-9 PMID: 12482937
  59. Inactivation of homologous recombination suppresses defects in topoisomerase III-deficient mutants.
    DNA Repair (Amst). 2002 Jun 21;1(6):463-82 PMID: 12509234
  60. Budding yeast mms4 is epistatic with rad52 and the function of Mms4 can be replaced by a bacterial Holliday junction resolvase.
    DNA Repair (Amst). 2003 Mar 1;2(3):347-58 PMID: 12547397
  61. Cleavage of model replication forks by fission yeast Mus81-Eme1 and budding yeast Mus81-Mms4.
    J Biol Chem. 2003 Feb 28;278(9):6928-35 PMID: 12473680
  62. RecQ helicases: caretakers of the genome.
    Nat Rev Cancer. 2003 Mar;3(3):169-78 PMID: 12612652
  63. Failure to produce mitochondrial DNA results in embryonic lethality in Rnaseh1 null mice.
    Mol Cell. 2003 Mar;11(3):807-15 PMID: 12667461
  64. The mechanism of Mus81-Mms4 cleavage site selection distinguishes it from the homologous endonuclease Rad1-Rad10.
    Mol Cell Biol. 2003 May;23(10):3487-96 PMID: 12724407
  65. Role for the fission yeast RecQ helicase in DNA repair in G2.
    Mol Cell Biol. 2003 May;23(10):3692-705 PMID: 12724426
  66. Identification and characterization of human MUS81-MMS4 structure-specific endonuclease.
    J Biol Chem. 2003 Jun 13;278(24):21715-20 PMID: 12686547
  67. Identification and characterization of the human mus81-eme1 endonuclease.
    J Biol Chem. 2003 Jul 4;278(27):25172-8 PMID: 12721304
  68. DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray.
    Nat Genet. 2003 Nov;35(3):277-86 PMID: 14566339
  69. Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast.
    Cell. 2003 Nov 14;115(4):401-11 PMID: 14622595
  70. Functional domains required for the Saccharomyces cerevisiae Mus81-Mms4 endonuclease complex formation and nuclear localization.
    DNA Repair (Amst). 2003 Dec 9;2(12):1435-47 PMID: 14642571
Article Info
Journal
Current genetics
Abbr.
Curr Genet
ISSN
0172-8083
Published
2005-10-00
Epub
2005-00-04
Pages
213-25
Language
English
Region
United States
NLM ID
8004904
PMCID
PMC1828632
Subset
IM
Grants
NIGMS NIH HHS · R01 GM067956 · United States
NIGMS NIH HHS · GM067956 · United States
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