Home LiteratureArticle Details
PMID: 16269746 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Stable coexistence of five bacterial strains as a cellulose-degrading community.

Applied and environmental microbiology ·Vol. 71 ·No. 11 ·2005-11-00 ·Pages 7099-106

Kato S, Haruta S, Cui ZJ, Ishii M, Igarashi Y

Abstract

A cellulose-degrading defined mixed culture (designated SF356) consisting of five bacterial strains (Clostridium straminisolvens CSK1, Clostridium sp. strain FG4, Pseudoxanthomonas sp. strain M1-3, Brevibacillus sp. strain M1-5, and Bordetella sp. strain M1-6) exhibited both functional and structural stability; namely, no change in cellulose-degrading efficiency was observed, and all members stably coexisted through 20 subcultures. In order to investigate the mechanisms responsible for the observed stability, "knockout communities" in which one of the members was eliminated from SF356 were constructed. The dynamics of the community structure and the cellulose degradation profiles of these mixed cultures were determined in order to evaluate the roles played by each eliminated member in situ and its impact on the other members of the community. Integration of each result gave the following estimates of the bacterial relationships. Synergistic relationships between an anaerobic cellulolytic bacterium (C. straminisolvens CSK1) and two strains of aerobic bacteria (Pseudoxanthomonas sp. strain M1-3 and Brevibacillus sp. strain M1-5) were observed; the aerobes introduced anaerobic conditions, and C. straminisolvens CSK1 supplied metabolites (acetate and glucose). In addition, there were negative relationships, such as the inhibition of cellulose degradation by producing excess amounts of acetic acid by Clostridium sp. strain FG4, and growth suppression of Bordetella sp. strain M1-6 by Brevibacillus sp. strain M1-5. The balance of the various types of relationships (both positive and negative) is thus considered to be essential for the stable coexistence of the members of this mixed culture.

MeSH Terms
Aerobiosis Anaerobiosis Bacteria/growth & development,metabolism Biodegradation, Environmental Bordetella/growth & development,metabolism Cellulose/metabolism Clostridium/growth & development,metabolism Culture Media DNA, Bacterial/analysis DNA, Ribosomal/analysis Ecosystem Molecular Sequence Data RNA, Ribosomal, 16S/genetics Sequence Analysis, DNA Serial Passage
Chemicals
Culture Media DNA, Bacterial DNA, Ribosomal RNA, Ribosomal, 16S Cellulose
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Kato Souichiro
Department of Biotechnology, Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.
Haruta Shin
Cui Zong Jun
Ishii Masaharu
Igarashi Yasuo
References (25)
25 references, click to expand
  1. Competitive and interactions affecting a fermentative spirochete in anaerobic chemostats.
    Microb Ecol. 2003 Jul;46(1):1-11 PMID: 14582492
  2. Construction of a stable microbial community with high cellulose-degradation ability.
    Appl Microbiol Biotechnol. 2002 Aug;59(4-5):529-34 PMID: 12172621
  3. Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors.
    Nature. 2002 Jul 11;418(6894):171-4 PMID: 12110887
  4. Coexistence of a sulphate-reducing Desulfovibrio species and the dehalorespiring Desulfitobacterium frappieri TCE1 in defined chemostat cultures grown with various combinations of sulfate and tetrachloroethene.
    Environ Microbiol. 2001 Feb;3(2):92-9 PMID: 11321548
  5. Parallel processing of substrate correlates with greater functional stability in methanogenic bioreactor communities perturbed by glucose.
    Appl Environ Microbiol. 2000 Sep;66(9):4050-7 PMID: 10966428
  6. How stable is stable? Function versus community composition.
    Appl Environ Microbiol. 1999 Aug;65(8):3697-704 PMID: 10427068
  7. Isolation of genomic DNAs from plants, fungi and bacteria using benzyl chloride.
    Nucleic Acids Res. 1993 Nov 11;21(22):5279-80 PMID: 8255788
  8. A novel pathway for mineralization of the thiocarbamate herbicide molinate by a defined bacterial mixed culture.
    Environ Microbiol. 2003 Oct;5(10):944-53 PMID: 14510848
  9. Clostridium straminisolvens sp. nov., a moderately thermophilic, aerotolerant and cellulolytic bacterium isolated from a cellulose-degrading bacterial community.
    Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2043-7 PMID: 15545431
  10. Effective cellulose degradation by a mixed-culture system composed of a cellulolytic Clostridium and aerobic non-cellulolytic bacteria.
    FEMS Microbiol Ecol. 2004 Dec 27;51(1):133-42 PMID: 16329862
  11. Sulfate-reducing bacterial community structure and their contribution to carbon mineralization in a wastewater biofilm growing under microaerophilic conditions.
    Appl Microbiol Biotechnol. 2003 Dec;63(3):322-34 PMID: 12879306
  12. Mutualism versus independence: strategies of mixed-species oral biofilms in vitro using saliva as the sole nutrient source.
    Infect Immun. 2001 Sep;69(9):5794-804 PMID: 11500457
  13. Flexible community structure correlates with stable community function in methanogenic bioreactor communities perturbed by glucose.
    Appl Environ Microbiol. 2000 Sep;66(9):4058-67 PMID: 10966429
  14. Enhanced Cellulose Fermentation by an Asporogenous and Ethanol-Tolerant Mutant of Clostridium thermocellum.
    Appl Environ Microbiol. 1989 Jan;55(1):207-11 PMID: 16347825
  15. PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database.
    Nucleic Acids Res. 2002 Aug 1;30(15):3481-9 PMID: 12140334
  16. Long-Term Stability of Mercury-Reducing Microbial Biofilm Communities Analyzed by 16S-23S rDNA Interspacer Region Polymorphism.
    Microb Ecol. 2001 Dec;42(4):624-634 PMID: 12024245
  17. Synergistic degradation of linuron by a bacterial consortium and isolation of a single linuron-degrading variovorax strain.
    Appl Environ Microbiol. 2003 Mar;69(3):1532-41 PMID: 12620840
  18. Development of a multispecies oral bacterial community in a saliva-conditioned flow cell.
    Appl Environ Microbiol. 2004 Jul;70(7):4340-8 PMID: 15240317
  19. Fermentation of Inulin by Clostridium thermosuccinogenes sp. nov., a Thermophilic Anaerobic Bacterium Isolated from Various Habitats.
    Appl Environ Microbiol. 1991 Feb;57(2):455-62 PMID: 16348411
  20. Stability of the bacterial community in a pulp mill effluent treatment system during normal operation and a system shutdown.
    Water Res. 2003 Dec;37(20):4873-84 PMID: 14604633
  21. Semimicro determination of cellulose in biological materials.
    Anal Biochem. 1969 Dec;32(3):420-4 PMID: 5361396
  22. Regulation of cellulase synthesis in batch and continuous cultures of Clostridium thermocellum.
    J Bacteriol. 2005 Jan;187(1):99-106 PMID: 15601693
  23. Isolation and initial characterization of a bacterial consortium able to mineralize fluorobenzene.
    Appl Environ Microbiol. 2002 Jan;68(1):102-5 PMID: 11772615
  24. Fermentation pattern of methanogenic degradation of rice straw in anoxic paddy soil.
    FEMS Microbiol Ecol. 2000 Feb 1;31(2):117-126 PMID: 10640665
  25. Diversity and dynamics of microbial communities in engineered environments and their implications for process stability.
    Curr Opin Biotechnol. 2003 Jun;14(3):270-6 PMID: 12849779
Article Info
Journal
Applied and environmental microbiology
Abbr.
Appl Environ Microbiol
ISSN
0099-2240
Published
2005-11-00
Pages
7099-106
Language
English
Region
United States
NLM ID
7605801
PMCID
PMC1287685
Subset
IM
Databases
GENBANK
AB207248
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]