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PMID: 16284797 Published · ppublish English Comparative Study Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

HCOP: the HGNC comparison of orthology predictions search tool.

Mammalian genome : official journal of the International Mammalian Genome Society ·Vol. 16 ·No. 11 ·2005-11-00 ·Pages 827-8

Wright MW, Eyre TA, Lush MJ, Povey S, Bruford EA

Abstract

The HGNC Comparison of Orthology Predictions search tool, HCOP (http://www.gene.ucl.ac.uk/cgi-bin/nomenclature/hcop.pl ), enables users to compare predicted human and mouse orthologs for a specified gene, or set of genes, from either species according to the ortholog assertions from the Ensembl, HGNC, Homologene, Inparanoid, MGI and PhIGs databases. Users can assess the reliability of the prediction from the number of these different sources that identify a particular orthologous pair. HCOP provides a useful one-stop resource to summarise, compare and access various sources of human and mouse orthology data.

MeSH Terms
Animals Databases, Genetic/standards Evolution, Molecular Genes Genome Genomics/methods Humans Mice
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Wright Mathew W
HUGO Gene Nomenclature Committee, The Galton Laboratory, Department of Biology, University College London, Wolfson House, 4, Stephenson Way, London, UK. [email protected]
Eyre Tina A
Lush Michael J
Povey Sue
Bruford Elspeth A
References (8)
8 references, click to expand
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Article Info
Journal
Mammalian genome : official journal of the International Mammalian Genome Society
Abbr.
Mamm Genome
ISSN
0938-8990
DOI
10.1007/s00335-005-0103-2
Email
[email protected]
Published
2005-11-00
Epub
2005-00-11
Pages
827-8
Language
English
Region
United States
NLM ID
9100916
Subset
IM
Grants
NHGRI NIH HHS · P41 HG003345 · United States
Wellcome Trust · United Kingdom
External Links
PubMed source DOI: 10.1007/s00335-005-0103-2 View journal details
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