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PMID: 16854228 Published · epublish English Comparative Study Journal Article

Identification by Real-time PCR of 13 mature microRNAs differentially expressed in colorectal cancer and non-tumoral tissues.

Molecular cancer ·Vol. 5 ·2006-07-19 ·Pages 29

Bandrés E, Cubedo E, Agirre X, Malumbres R, Zárate R, Ramirez N, Abajo A, Navarro A, Moreno I, Monzó M, García-Foncillas J

Abstract

MicroRNAs (miRNAs) are short non-coding RNA molecules playing regulatory roles by repressing translation or cleaving RNA transcripts. Although the number of verified human miRNA is still expanding, only few have been functionally described. However, emerging evidences suggest the potential involvement of altered regulation of miRNA in pathogenesis of cancers and these genes are thought to function as both tumours suppressor and oncogenes. In our study, we examined by Real-Time PCR the expression of 156 mature miRNA in colorectal cancer. The analysis by several bioinformatics algorithms of colorectal tumours and adjacent non-neoplastic tissues from patients and colorectal cancer cell lines allowed identifying a group of 13 miRNA whose expression is significantly altered in this tumor. The most significantly deregulated miRNA being miR-31, miR-96, miR-133b, miR-135b, miR-145, and miR-183. In addition, the expression level of miR-31 was correlated with the stage of CRC tumor. Our results suggest that miRNA expression profile could have relevance to the biological and clinical behavior of colorectal neoplasia.

MeSH Terms
Cluster Analysis Colon/cytology,metabolism Colorectal Neoplasms/metabolism Computer Systems Gene Expression Profiling Humans Matched-Pair Analysis MicroRNAs/metabolism Polymerase Chain Reaction/methods Tumor Cells, Cultured
Chemicals
MicroRNAs
Authors & Affiliations
11 authors, click to expand affiliations / ORCID
Bandrés E
Laboratory of Pharmacogenomics, Cancer Research Program (Center for Applied Medical Research), University of Navarra, Navarra, Spain. [email protected]
Cubedo E
Agirre X
Malumbres R
Zárate R
Ramirez N
Abajo A
Navarro A
Moreno I
Monzó M
García-Foncillas J
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Article Info
Journal
Molecular cancer
Abbr.
Mol Cancer
ISSN
1476-4598
Published
2006-07-19
Epub
2006-00-19
Pages
29
Language
English
Region
England
NLM ID
101147698
PMCID
PMC1550420
Subset
IM
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