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PMID: 18772897 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Review

Eating the enemy within: autophagy in infectious diseases.

Cell death and differentiation ·Vol. 16 ·No. 1 ·2009-01-00 ·Pages 57-69

Orvedahl A, Levine B

Abstract

Autophagy is emerging as a central component of antimicrobial host defense against diverse viral, bacterial, and parasitic infections. In addition to pathogen degradation, autophagy has other functions during infection such as innate and adaptive immune activation. As an important host defense pathway, microbes have also evolved mechanisms to evade, subvert, or exploit autophagy. Additionally, some fungal pathogens harness autophagy within their own cells to promote pathogenesis. This review will highlight our current understanding of autophagy in infection, focusing on the most recent advances in the field, and will discuss the potential implications of these studies in the design of anti-infective therapeutics.

MeSH Terms
Animals Autophagy/immunology Bacterial Infections/immunology,therapy Biological Evolution Host-Pathogen Interactions/immunology Humans Mycoses/immunology,therapy Parasitic Diseases/immunology,therapy Virus Diseases/immunology,therapy
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Orvedahl A
Howard Hughes Medical Institute and Department of Internal Medicine, University of Texas Southwestern Medical Center at Dallas, Dallas, TX 75390, USA.
Levine B
References (100)
100 references, click to expand
  1. Coronavirus replication does not require the autophagy gene ATG5.
    Autophagy. 2007 Nov-Dec;3(6):581-5 PMID: 17700057
  2. Hepatitis C virus genotype 1a growth and induction of autophagy.
    J Virol. 2008 Mar;82(5):2241-9 PMID: 18077704
  3. Autophagy induction favours the generation and maturation of the Coxiella-replicative vacuoles.
    Cell Microbiol. 2005 Jul;7(7):981-93 PMID: 15953030
  4. A Salmonella protein causes macrophage cell death by inducing autophagy.
    J Cell Biol. 2003 Dec 8;163(5):1123-31 PMID: 14662750
  5. Subversion of cellular autophagosomal machinery by RNA viruses.
    PLoS Biol. 2005 May;3(5):e156 PMID: 15884975
  6. Lysosomal killing of Mycobacterium mediated by ubiquitin-derived peptides is enhanced by autophagy.
    Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):6031-6 PMID: 17389386
  7. Autophagic fungal cell death is necessary for infection by the rice blast fungus.
    Science. 2006 Apr 28;312(5773):580-3 PMID: 16645096
  8. Cytoplasmic bacteria can be targets for autophagy.
    Cell Microbiol. 2003 Jul;5(7):455-68 PMID: 12814436
  9. Autophagy is induced in CD4+ T cells and important for the growth factor-withdrawal cell death.
    J Immunol. 2006 Oct 15;177(8):5163-8 PMID: 17015701
  10. Protection against fatal Sindbis virus encephalitis by beclin, a novel Bcl-2-interacting protein.
    J Virol. 1998 Nov;72(11):8586-96 PMID: 9765397
  11. Small molecule enhancers of rapamycin-induced TOR inhibition promote autophagy, reduce toxicity in Huntington's disease models and enhance killing of mycobacteria by macrophages.
    Autophagy. 2007 Nov-Dec;3(6):620-2 PMID: 17786022
  12. Arabidopsis ATG6 is required to limit the pathogen-associated cell death response.
    Autophagy. 2008 Jan;4(1):20-7 PMID: 17932459
  13. CD40-TRAF6 and autophagy-dependent anti-microbial activity in macrophages.
    Autophagy. 2007 May-Jun;3(3):245-8 PMID: 17224624
  14. Hsp90 inhibition results in autophagy-mediated proteasome-independent degradation of IkappaB kinase (IKK).
    Cell Res. 2006 Nov;16(11):895-901 PMID: 17088896
  15. JNK1-mediated phosphorylation of Bcl-2 regulates starvation-induced autophagy.
    Mol Cell. 2008 Jun 20;30(6):678-88 PMID: 18570871
  16. Autophagy-mediated reentry of Francisella tularensis into the endocytic compartment after cytoplasmic replication.
    Proc Natl Acad Sci U S A. 2006 Sep 26;103(39):14578-83 PMID: 16983090
  17. CD40 induces macrophage anti-Toxoplasma gondii activity by triggering autophagy-dependent fusion of pathogen-containing vacuoles and lysosomes.
    J Clin Invest. 2006 Sep;116(9):2366-77 PMID: 16955139
  18. Autophagy in the pathogenesis of disease.
    Cell. 2008 Jan 11;132(1):27-42 PMID: 18191218
  19. A critical role for the autophagy gene Atg5 in T cell survival and proliferation.
    J Exp Med. 2007 Jan 22;204(1):25-31 PMID: 17190837
  20. Cellular autophagy machinery is not required for vaccinia virus replication and maturation.
    Autophagy. 2006 Apr-Jun;2(2):91-5 PMID: 16874104
  21. Autophagy-dependent viral recognition by plasmacytoid dendritic cells.
    Science. 2007 Mar 9;315(5817):1398-401 PMID: 17272685
  22. Subversion of cellular autophagy by Anaplasma phagocytophilum.
    Cell Microbiol. 2008 Mar;10(3):593-605 PMID: 17979984
  23. Structural and biochemical bases for the inhibition of autophagy and apoptosis by viral BCL-2 of murine gamma-herpesvirus 68.
    PLoS Pathog. 2008 Feb 8;4(2):e25 PMID: 18248095
  24. Endosome sorting and autophagy are essential for differentiation and virulence of Leishmania major.
    J Biol Chem. 2006 Apr 21;281(16):11384-96 PMID: 16497676
  25. A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1.
    Nat Genet. 2007 Feb;39(2):207-11 PMID: 17200669
  26. Human IRGM induces autophagy to eliminate intracellular mycobacteria.
    Science. 2006 Sep 8;313(5792):1438-41 PMID: 16888103
  27. Unexpected link between metal ion deficiency and autophagy in Aspergillus fumigatus.
    Eukaryot Cell. 2007 Dec;6(12):2437-47 PMID: 17921348
  28. The B cell receptor governs the subcellular location of Toll-like receptor 9 leading to hyperresponses to DNA-containing antigens.
    Immunity. 2008 Jun;28(6):799-809 PMID: 18513998
  29. Human cytomegalovirus controls a new autophagy-dependent cellular antiviral defense mechanism.
    Autophagy. 2008 Jan;4(1):46-53 PMID: 18340111
  30. Autophagy in the pathogen Candida albicans.
    Microbiology (Reading). 2007 Jan;153(Pt 1):51-8 PMID: 17185534
  31. Differential regulation of caspase-1 activation, pyroptosis, and autophagy via Ipaf and ASC in Shigella-infected macrophages.
    PLoS Pathog. 2007 Aug 10;3(8):e111 PMID: 17696608
  32. Cellular autophagy: surrender, avoidance and subversion by microorganisms.
    Nat Rev Microbiol. 2004 Apr;2(4):301-14 PMID: 15031729
  33. Identification of host proteins required for HIV infection through a functional genomic screen.
    Science. 2008 Feb 15;319(5865):921-6 PMID: 18187620
  34. Autophagy controls Salmonella infection in response to damage to the Salmonella-containing vacuole.
    J Biol Chem. 2006 Apr 21;281(16):11374-83 PMID: 16495224
  35. Listeria monocytogenes evades killing by autophagy during colonization of host cells.
    Autophagy. 2007 Sep-Oct;3(5):442-51 PMID: 17568179
  36. Autophagy limits Listeria monocytogenes intracellular growth in the early phase of primary infection.
    Autophagy. 2007 Mar-Apr;3(2):117-25 PMID: 17204850
  37. Toll-like receptor signalling in macrophages links the autophagy pathway to phagocytosis.
    Nature. 2007 Dec 20;450(7173):1253-7 PMID: 18097414
  38. Listeriolysin O allows Listeria monocytogenes replication in macrophage vacuoles.
    Nature. 2008 Jan 17;451(7176):350-4 PMID: 18202661
  39. Escape of intracellular Shigella from autophagy.
    Science. 2005 Feb 4;307(5710):727-31 PMID: 15576571
  40. Autophagy during conidiation, conidial germination and turgor generation in Magnaporthe grisea.
    Autophagy. 2007 Sep-Oct;3(5):472-3 PMID: 17495517
  41. Viral evasion of autophagy.
    Autophagy. 2008 Apr;4(3):280-5 PMID: 18059171
  42. Vibrio parahaemolyticus orchestrates a multifaceted host cell infection by induction of autophagy, cell rounding, and then cell lysis.
    Proc Natl Acad Sci U S A. 2008 Aug 26;105(34):12497-502 PMID: 18713860
  43. Autophagic control of listeria through intracellular innate immune recognition in drosophila.
    Nat Immunol. 2008 Aug;9(8):908-16 PMID: 18604211
  44. Autophagy is a defense mechanism inhibiting BCG and Mycobacterium tuberculosis survival in infected macrophages.
    Cell. 2004 Dec 17;119(6):753-66 PMID: 15607973
  45. Antigen-loading compartments for major histocompatibility complex class II molecules continuously receive input from autophagosomes.
    Immunity. 2007 Jan;26(1):79-92 PMID: 17182262
  46. PKR-dependent autophagic degradation of herpes simplex virus type 1.
    Autophagy. 2006 Jan-Mar;2(1):24-9 PMID: 16874088
  47. Protective role of autophagy against Vibrio cholerae cytolysin, a pore-forming toxin from V. cholerae.
    Proc Natl Acad Sci U S A. 2007 Feb 6;104(6):1829-34 PMID: 17267617
  48. Autophagy is induced during cell death by incompatibility and is essential for differentiation in the filamentous fungus Podospora anserina.
    Mol Microbiol. 2003 Jan;47(2):321-33 PMID: 12519185
  49. Stimulation of autophagy suppresses the intracellular survival of Burkholderia pseudomallei in mammalian cell lines.
    Autophagy. 2008 Aug;4(6):744-53 PMID: 18483470
  50. Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis.
    Nat Genet. 2007 May;39(5):596-604 PMID: 17435756
  51. Eating oneself and uninvited guests: autophagy-related pathways in cellular defense.
    Cell. 2005 Jan 28;120(2):159-62 PMID: 15680321
  52. Autophagy is involved in T cell death after binding of HIV-1 envelope proteins to CXCR4.
    J Clin Invest. 2006 Aug;116(8):2161-72 PMID: 16886061
  53. Bcl-2 antiapoptotic proteins inhibit Beclin 1-dependent autophagy.
    Cell. 2005 Sep 23;122(6):927-39 PMID: 16179260
  54. Major histocompatibility complex class II-restricted presentation of a cytosolic antigen by autophagy.
    Eur J Immunol. 2003 May;33(5):1250-9 PMID: 12731050
  55. ird1 is a Vps15 homologue important for antibacterial immune responses in Drosophila.
    Cell Microbiol. 2007 Apr;9(4):1073-85 PMID: 17166233
  56. Induction of autophagy does not affect human rhinovirus type 2 production.
    J Virol. 2007 Oct;81(19):10815-7 PMID: 17670838
  57. Involvement of a Magnaporthe grisea serine/threonine kinase gene, MgATG1, in appressorium turgor and pathogenesis.
    Eukaryot Cell. 2007 Jun;6(6):997-1005 PMID: 17416896
  58. Pathogen recognition and innate immunity.
    Cell. 2006 Feb 24;124(4):783-801 PMID: 16497588
  59. T helper 2 cytokines inhibit autophagic control of intracellular Mycobacterium tuberculosis.
    Immunity. 2007 Sep;27(3):505-17 PMID: 17892853
  60. Autophagic machinery activated by dengue virus enhances virus replication.
    Virology. 2008 May 10;374(2):240-8 PMID: 18353420
  61. HSV-1 ICP34.5 confers neurovirulence by targeting the Beclin 1 autophagy protein.
    Cell Host Microbe. 2007 Mar 15;1(1):23-35 PMID: 18005679
  62. The cell biology of autophagy in metazoans: a developing story.
    Development. 2008 Aug;135(14):2347-60 PMID: 18567846
  63. Autophagic and tumour suppressor activity of a novel Beclin1-binding protein UVRAG.
    Nat Cell Biol. 2006 Jul;8(7):688-99 PMID: 16799551
  64. Human immunodeficiency virus type-1 infection inhibits autophagy.
    AIDS. 2008 Mar 30;22(6):695-9 PMID: 18356598
  65. Toll-like receptors control autophagy.
    EMBO J. 2008 Apr 9;27(7):1110-21 PMID: 18337753
  66. Endogenous MHC class II processing of a viral nuclear antigen after autophagy.
    Science. 2005 Jan 28;307(5709):593-6 PMID: 15591165
  67. Regulation of starvation- and virus-induced autophagy by the eIF2alpha kinase signaling pathway.
    Proc Natl Acad Sci U S A. 2002 Jan 8;99(1):190-5 PMID: 11756670
  68. Francisella tularensis strain LVS resides in MHC II-positive autophagic vacuoles in macrophages.
    Folia Microbiol (Praha). 2007;52(6):631-6 PMID: 18450226
  69. Survival of parvovirus B19-infected cells by cellular autophagy.
    Virology. 2006 Jun 5;349(2):254-63 PMID: 16643977
  70. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
    Nature. 2007 Jun 7;447(7145):661-78 PMID: 17554300
  71. Cysteine peptidases CPA and CPB are vital for autophagy and differentiation in Leishmania mexicana.
    Mol Microbiol. 2006 Aug;61(3):655-74 PMID: 16803590
  72. Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility.
    Nat Genet. 2007 Jul;39(7):830-2 PMID: 17554261
  73. Toll-like receptor 4 is a sensor for autophagy associated with innate immunity.
    Immunity. 2007 Jul;27(1):135-44 PMID: 17658277
  74. Innate and adaptive immunity through autophagy.
    Immunity. 2007 Jul;27(1):11-21 PMID: 17663981
  75. COPI activity coupled with fatty acid biosynthesis is required for viral replication.
    PLoS Pathog. 2006 Oct;2(10):e102 PMID: 17040126
  76. Autophagy and human disease.
    Cell Cycle. 2007 Aug 1;6(15):1837-49 PMID: 17671424
  77. Autophagosome formation: core machinery and adaptations.
    Nat Cell Biol. 2007 Oct;9(10):1102-9 PMID: 17909521
  78. Accelerated cell death in Podospora autophagy mutants.
    Eukaryot Cell. 2005 Nov;4(11):1765-74 PMID: 16278443
  79. Potential therapeutic applications of autophagy.
    Nat Rev Drug Discov. 2007 Apr;6(4):304-12 PMID: 17396135
  80. Vacuolar and plasma membrane stripping and autophagic elimination of Toxoplasma gondii in primed effector macrophages.
    J Exp Med. 2006 Sep 4;203(9):2063-71 PMID: 16940170
  81. ER stress (PERK/eIF2alpha phosphorylation) mediates the polyglutamine-induced LC3 conversion, an essential step for autophagy formation.
    Cell Death Differ. 2007 Feb;14(2):230-9 PMID: 16794605
  82. Autophagy is involved in nutritional stress response and differentiation in Trypanosoma cruzi.
    J Biol Chem. 2008 Feb 8;283(6):3454-3464 PMID: 18039653
  83. Autophagosome supports coxsackievirus B3 replication in host cells.
    J Virol. 2008 Sep;82(18):9143-53 PMID: 18596087
  84. Autophagy defends cells against invading group A Streptococcus.
    Science. 2004 Nov 5;306(5698):1037-40 PMID: 15528445
  85. Hsp90 regulates processing of NF-kappa B2 p100 involving protection of NF-kappa B-inducing kinase (NIK) from autophagy-mediated degradation.
    Cell Res. 2007 Jun;17(6):520-30 PMID: 17563756
  86. Unveiling the roles of autophagy in innate and adaptive immunity.
    Nat Rev Immunol. 2007 Oct;7(10):767-77 PMID: 17767194
  87. Involvement of autophagy in viral infections: antiviral function and subversion by viruses.
    J Mol Med (Berl). 2007 Aug;85(8):811-23 PMID: 17340132
  88. Autophagy promotes MHC class II presentation of peptides from intracellular source proteins.
    Proc Natl Acad Sci U S A. 2005 May 31;102(22):7922-7 PMID: 15894616
  89. The autophagy gene ATG5 plays an essential role in B lymphocyte development.
    Autophagy. 2008 Apr;4(3):309-14 PMID: 18188005
  90. Autophagy during proliferation and encystation in the protozoan parasite Entamoeba invadens.
    Infect Immun. 2008 Jan;76(1):278-88 PMID: 17923513
  91. Modification of cellular autophagy protein LC3 by poliovirus.
    J Virol. 2007 Nov;81(22):12543-53 PMID: 17804493
  92. Autophagy regulates programmed cell death during the plant innate immune response.
    Cell. 2005 May 20;121(4):567-577 PMID: 15907470
  93. Cell biology: autophagy and cancer.
    Nature. 2007 Apr 12;446(7137):745-7 PMID: 17429391
  94. Blocking autophagy to prevent parasite differentiation: a possible new strategy for fighting parasitic infections?
    Autophagy. 2008 Apr;4(3):361-3 PMID: 18212533
  95. Autophagy in innate immunity against intracellular bacteria.
    J Biochem. 2006 Aug;140(2):161-6 PMID: 16954534
  96. Staphylococcus aureus subvert autophagy for induction of caspase-independent host cell death.
    J Biol Chem. 2007 Jan 26;282(4):2695-706 PMID: 17135247
  97. Autophagy gene-dependent clearance of apoptotic cells during embryonic development.
    Cell. 2007 Mar 9;128(5):931-46 PMID: 17350577
  98. 2007 Keystone Symposium on Autophagy in Health and Disease.
    Autophagy. 2007 Sep-Oct;3(5):527-36 PMID: 17617735
  99. PI3K signaling of autophagy is required for starvation tolerance and virulenceof Cryptococcus neoformans.
    J Clin Invest. 2008 Mar;118(3):1186-97 PMID: 18259613
  100. NF-kappaB activation represses tumor necrosis factor-alpha-induced autophagy.
    J Biol Chem. 2006 Oct 13;281(41):30373-82 PMID: 16857678
Article Info
Journal
Cell death and differentiation
Abbr.
Cell Death Differ
ISSN
1476-5403
Published
2009-01-00
Epub
2008-00-05
Pages
57-69
Language
English
Region
England
NLM ID
9437445
PMCID
PMC2736877
Subset
IM
Grants
PHS HHS · R01 A10151367 · United States
PHS HHS · T32 A1007520 · United States
NIAID NIH HHS · R01 AI051367 · United States
Howard Hughes Medical Institute · United States
NIAID NIH HHS · R01 AI051367-06 · United States
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