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PMID: 1917841 Published · ppublish English Journal Article

Genetic analysis, nucleotide sequence, and products of two Pseudomonas denitrificans cob genes encoding nicotinate-nucleotide: dimethylbenzimidazole phosphoribosyltransferase and cobalamin (5'-phosphate) synthase.

Journal of bacteriology ·Vol. 173 ·No. 19 ·1991-10-00 ·Pages 6066-73

Cameron B, Blanche F, Rouyez MC, Bisch D, Famechon A, Couder M, Cauchois L, Thibaut D, Debussche L, Crouzet J

Abstract

Tn5 Sp(r) transposons have been inserted into the 8-kb Pseudomonas denitrificans DNA fragment from complementation group D, which carries cob genes. Genetic analysis and the nucleotide sequence revealed that only two cob genes (cobU and cobV) were found on this cob genomic locus. Nicotinate-nucleotide: dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) was assayed and purified to homogeneity from a P. denitrificans strain in which cobU and cobV were amplified. The purified enzyme was identified as the cobU gene product on the basis of identical molecular weights and N-terminal sequences. Cobalamin (5'-phosphate) synthase activity was increased when cobV was amplified in P. denitrificans. The partially purified enzyme catalyzed not only the synthesis of cobalamin 5'-phosphate from GDP-cobinamide and alpha-ribazole 5'-phosphate but also the one-step synthesis of cobalamin from GDP-cobinamide and alpha-ribazole. Biochemical data provided evidence that cobV encodes cobalamin (5'-phosphate) synthase.

Related Genes
MeSH Terms
Amino Acid Sequence Bacterial Proteins Base Composition Base Sequence Cobamides/biosynthesis,genetics DNA, Bacterial/chemistry,isolation & purification Deoxyribonuclease EcoRI Deoxyribonuclease HindIII Gene Amplification Genes, Bacterial Genetic Complementation Test Kinetics Molecular Sequence Data Molecular Weight Multienzyme Complexes Nitrogenous Group Transferases Nucleotidyltransferases Pentosyltransferases/genetics Pseudomonas/enzymology,genetics Transferases/genetics
Chemicals
Bacterial Proteins Cobamides DNA, Bacterial Multienzyme Complexes Transferases Pentosyltransferases nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase Nitrogenous Group Transferases CobV protein, Pseudomonas denitrificans Nucleotidyltransferases Deoxyribonuclease EcoRI Deoxyribonuclease HindIII
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Cameron B
Unité de Biologie Moléculaire, Institut des Biotechnologies, Vitry-sur-Seine, France.
Blanche F
Rouyez M C
Bisch D
Famechon A
Couder M
Cauchois L
Thibaut D
Debussche L
Crouzet J
References (29)
29 references, click to expand
  1. Benzimidazole riboside, a possible precursor of vitamin B12 in Propionibacterium shermanii.
    Biochem Biophys Res Commun. 1962 Jul 3;8:164-8 PMID: 13895300
  2. Vitamin B 12 biosynthesis. Enzyme studies on the formation of the alpha-glycosidic nucleotide precursor.
    J Biol Chem. 1969 Apr 10;244(7):1659-66 PMID: 4238408
  3. Nucleotide sequence of a Pseudomonas denitrificans 5.4-kilobase DNA fragment containing five cob genes and identification of structural genes encoding S-adenosyl-L-methionine: uroporphyrinogen III methyltransferase and cobyrinic acid a,c-diamide synthase.
    J Bacteriol. 1990 Oct;172(10):5968-79 PMID: 2211520
  4. Purification and characterization of cobyrinic acid a,c-diamide synthase from Pseudomonas denitrificans.
    J Bacteriol. 1990 Nov;172(11):6239-44 PMID: 2172209
  5. Genetic and sequence analyses of a Pseudomonas denitrificans DNA fragment containing two cob genes.
    J Bacteriol. 1991 Oct;173(19):6058-65 PMID: 1917840
  6. A bifunctional protein from Pseudomonas denitrificans carries cobinamide kinase and cobinamide phosphate guanylyltransferase activities.
    J Bacteriol. 1991 Oct;173(19):6052-7 PMID: 1655696
  7. Identification and quantitation of corrinoid precursors of cobalamin from Pseudomonas denitrificans by high-performance liquid chromatography.
    Anal Biochem. 1990 Aug 15;189(1):24-9 PMID: 2278386
  8. Genetic and sequence analysis of an 8.7-kilobase Pseudomonas denitrificans fragment carrying eight genes involved in transformation of precorrin-2 to cobyrinic acid.
    J Bacteriol. 1990 Oct;172(10):5980-90 PMID: 2211521
  9. Cloning and analysis of genes involved in coenzyme B12 biosynthesis in Pseudomonas denitrificans.
    J Bacteriol. 1989 Jan;171(1):547-57 PMID: 2536665
  10. Vectors for selective expression of cloned DNAs by T7 RNA polymerase.
    Gene. 1987;56(1):125-35 PMID: 3315856
  11. Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes.
    J Mol Biol. 1986 May 5;189(1):113-30 PMID: 3537305
  12. Divergent promoters, a common form of gene organization.
    Microbiol Rev. 1988 Sep;52(3):318-26 PMID: 3054465
  13. Purification and characterization of S-adenosyl-L-methionine: uroporphyrinogen III methyltransferase from Pseudomonas denitrificans.
    J Bacteriol. 1989 Aug;171(8):4222-31 PMID: 2546914
  14. The biosynthesis of porphyrins, chlorophylls, and vitamin B12.
    Nat Prod Rep. 1989 Apr;6(2):171-203 PMID: 2664584
  15. Nucleotide sequence of the btuCED genes involved in vitamin B12 transport in Escherichia coli and homology with components of periplasmic-binding-protein-dependent transport systems.
    J Bacteriol. 1986 Sep;167(3):928-34 PMID: 3528129
  16. Identification of the btuCED polypeptides and evidence for their role in vitamin B12 transport in Escherichia coli.
    J Bacteriol. 1986 Sep;167(3):920-7 PMID: 3528128
  17. The DNA sequences encoding plsB and dgk loci of Escherichia coli.
    J Biol Chem. 1983 Sep 25;258(18):10856-61 PMID: 6309817
  18. Prediction of protein antigenic determinants from amino acid sequences.
    Proc Natl Acad Sci U S A. 1981 Jun;78(6):3824-8 PMID: 6167991
  19. Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas.
    Gene. 1981 Dec;16(1-3):237-47 PMID: 6282695
  20. Structure of the adenylcobamide coenzyme: degradation by cyanide, acid, and light.
    J Biol Chem. 1960 May;235:1462-73 PMID: 13843764
  21. PARTIAL PURIFICATION AND PROPERTIES OF A SINGLE DISPLACEMENT TRANS-N-GLYCOSIDASE.
    J Biol Chem. 1965 Jan;240:413-8 PMID: 14253445
  22. THE FORMATION OF ALPHA-GLYCOSIDIC 5'-NUCLEOTIDES BY A SINGLE DISPLACEMENT TRANS-N-GLYCOSIDASE.
    J Biol Chem. 1965 Jan;240:406-12 PMID: 14253444
  23. Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):551-67 PMID: 6364041
  24. Use of statistical criteria for screening potential homologies in nucleic acid sequences.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):203-13 PMID: 6694901
  25. Biosynthesis of vitamin B-12. Part I. Role of the ribosomal proteins in vitamin B-12 biosynthesis.
    Biochim Biophys Acta. 1981 Dec 18;678(3):300-15 PMID: 7032603
  26. Broad host range DNA cloning system for gram-negative bacteria: construction of a gene bank of Rhizobium meliloti.
    Proc Natl Acad Sci U S A. 1980 Dec;77(12):7347-51 PMID: 7012838
  27. Codon preference and its use in identifying protein coding regions in long DNA sequences.
    Nucleic Acids Res. 1982 Jan 11;10(1):141-56 PMID: 7063399
  28. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.
    J Bacteriol. 1978 Jun;134(3):1141-56 PMID: 149110
  29. Further observations on the biosynthesis of vitamin B12 in Nocardia rugosa.
    Biochim Biophys Acta. 1962 Mar 12;57:599-600 PMID: 13864884
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1991-10-00
Pages
6066-73
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC208353
Subset
IM
Databases
GENBANK
M62868, M64126, M64127, M64128, M64129, S52988, S52991, S53821, S57155, X61007
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