Home LiteratureArticle Details
PMID: 1940801 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Human autoantibody to RNA polymerase I transcription factor hUBF. Molecular identity of nucleolus organizer region autoantigen NOR-90 and ribosomal RNA transcription upstream binding factor.

The Journal of experimental medicine ·Vol. 174 ·No. 5 ·1991-11-01 ·Pages 1239-44

Chan EK, Imai H, Hamel JC, Tan EM

Abstract

In dividing eukaryotic cells, nucleoli disperse before mitosis and reform in daughter cells at sites of ribosomal RNA (rRNA) gene clusters that are at the secondary constrictions of chromosomes, called nucleolus organizer regions (NORs). In this study, cDNA clones for a NOR autoantigen (NOR-90) were selected using a specific human autoantibody probe and were subsequently identified to encode an alternative form of the reported human upstream binding factor (hUBF). Results from immunoprecipitation showed that anti-NOR-90 antibodies recognized both forms of hUBF/NOR-90. Our data therefore showed that UBF, a critical factor in the regulation of rRNA transcription, was tightly bound to NOR during mitosis even when rRNA synthesis was thought to be minimal. Furthermore, we identified a nucleolar transcription factor as a novel target for human autoimmune response.

MeSH Terms
Amino Acid Sequence Autoantibodies Autoantigens/analysis,genetics Base Sequence DNA-Binding Proteins/analysis,genetics,immunology Humans Molecular Sequence Data Nucleolus Organizer Region/immunology Pol1 Transcription Initiation Complex Proteins RNA Polymerase I/genetics RNA, Ribosomal/genetics Transcription Factors/analysis,genetics,immunology
Chemicals
Autoantibodies Autoantigens DNA-Binding Proteins Pol1 Transcription Initiation Complex Proteins RNA, Ribosomal Transcription Factors transcription factor UBF RNA Polymerase I
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Chan E K
W. M. Keck Autoimmune Disease Center, Department of Molecular and Experimental Medicine, Scripps Research Institute, La Jolla, California 92037.
Imai H
Hamel J C
Tan E M
References (35)
35 references, click to expand
  1. The structure and behavior of the nucleolus organizer in mammalian cells.
    Chromosoma. 1967;23(2):137-53 PMID: 4970485
  2. Transcription of cloned eukaryotic ribosomal RNA genes.
    Annu Rev Biochem. 1986;55:801-30 PMID: 3527052
  3. A general method applicable to the search for similarities in the amino acid sequence of two proteins.
    J Mol Biol. 1970 Mar;48(3):443-53 PMID: 5420325
  4. Suppression of human nucleolus organizer activity in mouse-human somatic hybrid cells.
    Exp Cell Res. 1976 Sep;101(2):235-43 PMID: 61125
  5. Determination of nucleotide sequences in DNA.
    Science. 1981 Dec 11;214(4526):1205-10 PMID: 7302589
  6. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
    Anal Biochem. 1983 Jul 1;132(1):6-13 PMID: 6312838
  7. Yeast RNA polymerase II genes: isolation with antibody probes.
    Science. 1983 Nov 18;222(4625):778-82 PMID: 6356359
  8. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  9. Scl 70 autoantibodies from scleroderma patients recognize a 95 kDa protein identified as DNA topoisomerase I.
    Chromosoma. 1986;94(2):132-8 PMID: 2428564
  10. Two distinct promoter elements in the human rRNA gene identified by linker scanning mutagenesis.
    Mol Cell Biol. 1986 Jan;6(1):227-35 PMID: 3785147
  11. Autoantibody to RNA polymerase I in scleroderma sera.
    J Clin Invest. 1987 Jan;79(1):65-72 PMID: 2432091
  12. Monoclonal autoantibody from a (New Zealand black x New Zealand white)F1 mouse and some human scleroderma sera target an Mr 34,000 nucleolar protein of the U3 RNP particle.
    Arthritis Rheum. 1987 Jul;30(7):793-800 PMID: 2441711
  13. Anti-NOR 90. A new autoantibody in scleroderma that recognizes a 90-kDa component of the nucleolus-organizing region of chromatin.
    J Immunol. 1987 Oct 15;139(8):2579-84 PMID: 3309055
  14. Human autoantibody-reactive epitopes of SS-B/La are highly conserved in comparison with epitopes recognized by murine monoclonal antibodies.
    J Exp Med. 1987 Dec 1;166(6):1627-40 PMID: 2445893
  15. Functional cooperativity between transcription factors UBF1 and SL1 mediates human ribosomal RNA synthesis.
    Science. 1988 Sep 2;241(4870):1192-7 PMID: 3413483
  16. Antinuclear antibodies: diagnostic markers for autoimmune diseases and probes for cell biology.
    Adv Immunol. 1989;44:93-151 PMID: 2646863
  17. CLUSTAL: a package for performing multiple sequence alignment on a microcomputer.
    Gene. 1988 Dec 15;73(1):237-44 PMID: 3243435
  18. Fast and sensitive multiple sequence alignments on a microcomputer.
    Comput Appl Biosci. 1989 Apr;5(2):151-3 PMID: 2720464
  19. Nucleologenesis: use of non-isotopic in situ hybridization and immunocytochemistry to compare the localization of rDNA and nucleolar proteins during mitosis.
    Biol Cell. 1989;65(3):239-46 PMID: 2752212
  20. The Xenopus ribosomal gene enhancers bind an essential polymerase I transcription factor, xUBF.
    Genes Dev. 1989 Nov;3(11):1779-88 PMID: 2606347
  21. The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing.
    Cell. 1990 Mar 23;60(6):897-908 PMID: 2156625
  22. Nucleolar transcription factor hUBF contains a DNA-binding motif with homology to HMG proteins.
    Nature. 1990 Apr 26;344(6269):830-6 PMID: 2330041
  23. rUBF, an RNA polymerase I transcription factor from rats, produces DNase I footprints identical to those produced by xUBF, its homolog from frogs.
    Mol Cell Biol. 1990 Jul;10(7):3810-2 PMID: 2355924
  24. The analysis of antinuclear and antinucleolar autoantibodies of scleroderma by radioimmunoprecipitation assays.
    Arthritis Rheum. 1990 Sep;33(9):1431-7 PMID: 2403405
  25. Identification and cloning of TCF-1, a T lymphocyte-specific transcription factor containing a sequence-specific HMG box.
    EMBO J. 1991 Jan;10(1):123-32 PMID: 1989880
  26. The small nucleolar RNP protein NOP1 (fibrillarin) is required for pre-rRNA processing in yeast.
    EMBO J. 1991 Mar;10(3):573-83 PMID: 1825809
  27. Identification of two forms of the RNA polymerase I transcription factor UBF.
    Proc Natl Acad Sci U S A. 1991 Apr 15;88(8):3180-4 PMID: 2014238
  28. The RNA polymerase I transcription factor xUBF contains 5 tandemly repeated HMG homology boxes.
    Nucleic Acids Res. 1991 May 11;19(9):2331-5 PMID: 2041774
  29. Transcription of herpes simplex virus tk sequences under the control of wild-type and mutant human RNA polymerase I promoters.
    Mol Cell Biol. 1985 Feb;5(2):352-62 PMID: 2983190
  30. Anti-kinetochore antibodies: use as probes for inactive centromeres.
    Am J Hum Genet. 1985 Mar;37(2):425-30 PMID: 3885726
  31. Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.
    DNA. 1985 Apr;4(2):165-70 PMID: 3996185
  32. Purification and characterization of a transcription factor that confers promoter specificity to human RNA polymerase I.
    Mol Cell Biol. 1985 Jun;5(6):1358-69 PMID: 3929071
  33. Nucleologenesis: composition and fate of prenucleolar bodies.
    Chromosoma. 1985;92(5):330-6 PMID: 3902398
  34. High titers of autoantibodies to topoisomerase I (Scl-70) in sera from scleroderma patients.
    Science. 1986 Feb 14;231(4739):737-40 PMID: 3003910
  35. Indian muntjac, Muntiacus muntjak: a deer with a low diploid chromosome number.
    Science. 1970 Jun 12;168(3937):1364-6 PMID: 5444269
Article Info
Journal
The Journal of experimental medicine
Abbr.
J Exp Med
ISSN
0022-1007
Published
1991-11-01
Pages
1239-44
Language
English
Region
United States
NLM ID
2985109R
PMCID
PMC2119007
Subset
IM
Grants
NIAMS NIH HHS · AR-32063 · United States
Databases
GENBANK
S64260, S64265, X54781, X54782, X54783, X54784, X56687, X56688, X58605, X58606
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]