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PMID: 20541286 Published · ppublish English Comparative Study Journal Article Multicenter Study Randomized Controlled Trial Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Boosting power for clinical trials using classifiers based on multiple biomarkers.

Neurobiology of aging ·Vol. 31 ·No. 8 ·2010-08-00 ·Pages 1429-42

Kohannim O, Hua X, Hibar DP, Lee S, Chou YY, Toga AW, Jack CR, Weiner MW, Thompson PM, Alzheimer's Disease Neuroimaging Initiative

Abstract

Machine learning methods pool diverse information to perform computer-assisted diagnosis and predict future clinical decline. We introduce a machine learning method to boost power in clinical trials. We created a Support Vector Machine algorithm that combines brain imaging and other biomarkers to classify 737 Alzheimer's disease Neuroimaging initiative (ADNI) subjects as having Alzheimer's disease (AD), mild cognitive impairment (MCI), or normal controls. We trained our classifiers based on example data including: MRI measures of hippocampal, ventricular, and temporal lobe volumes, a PET-FDG numerical summary, CSF biomarkers (t-tau, p-tau, and Abeta(42)), ApoE genotype, age, sex, and body mass index. MRI measures contributed most to Alzheimer's disease (AD) classification; PET-FDG and CSF biomarkers, particularly Abeta(42), contributed more to MCI classification. Using all biomarkers jointly, we used our classifier to select the one-third of the subjects most likely to decline. In this subsample, fewer than 40 AD and MCI subjects would be needed to detect a 25% slowing in temporal lobe atrophy rates with 80% power--a substantial boosting of power relative to standard imaging measures.

MeSH Terms
Age Factors Aged Aged, 80 and over Alzheimer Disease/cerebrospinal fluid,classification,genetics Apolipoprotein E4/genetics Artificial Intelligence Biomarkers/cerebrospinal fluid Cognition Disorders/cerebrospinal fluid,classification,genetics Female Genotype Humans Male Randomized Controlled Trials as Topic/methods Sex Factors
Chemicals
Apolipoprotein E4 Biomarkers
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Kohannim Omid
Laboratory of Neuro Imaging, Department of Neurology, UCLA School of Medicine, Los Angeles, CA 90095-1769, USA.
Hua Xue
Hibar Derrek P
Lee Suh
Chou Yi-Yu
Toga Arthur W
Jack Clifford R
Weiner Michael W
Thompson Paul M
Alzheimer's Disease Neuroimaging Initiative
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Article Info
Journal
Neurobiology of aging
Abbr.
Neurobiol Aging
ISSN
1558-1497
Published
2010-08-00
Epub
2010-00-11
Pages
1429-42
Language
English
Region
United States
NLM ID
8100437
PMCID
PMC2903199
Subset
IM
Grants
NIA NIH HHS · K01 AG030514 · United States
NIA NIH HHS · U01 AG024904-04 · United States
NIA NIH HHS · P30 AG010129-19 · United States
NIA NIH HHS · P30 AG010129 · United States
NIA NIH HHS · K01 AG030514-02 · United States
NIA NIH HHS · U01 AG024904 · United States
NIA NIH HHS · U19 AG010483 · United States
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