Home LiteratureArticle Details
PMID: 22822206 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The Arabidopsis mediator subunit MED25 differentially regulates jasmonate and abscisic acid signaling through interacting with the MYC2 and ABI5 transcription factors.

The Plant cell ·Vol. 24 ·No. 7 ·2012-07-00 ·Pages 2898-916

Chen R, Jiang H, Li L, Zhai Q, Qi L, Zhou W, Liu X, Li H, Zheng W, Sun J, Li C

Abstract

Transcriptional regulation plays a central role in plant hormone signaling. At the core of transcriptional regulation is the Mediator, an evolutionarily conserved, multisubunit complex that serves as a bridge between gene-specific transcription factors and the RNA polymerase machinery to regulate transcription. Here, we report the action mechanisms of the MEDIATOR25 (MED25) subunit of the Arabidopsis thaliana Mediator in regulating jasmonate- and abscisic acid (ABA)-triggered gene transcription. We show that during jasmonate signaling, MED25 physically associates with the basic helix-loop-helix transcription factor MYC2 in promoter regions of MYC2 target genes and exerts a positive effect on MYC2-regulated gene transcription. We also show that MED25 physically associates with the basic Leu zipper transcription factor ABA-INSENSITIVE5 (ABI5) in promoter regions of ABI5 target genes and shows a negative effect on ABI5-regulated gene transcription. Our results reveal that underlying the distinct effects of MED25 on jasmonate and ABA signaling, the interaction mechanisms of MED25 with MYC2 and ABI5 are different. These results highlight that the MED25 subunit of the Arabidopsis Mediator regulates a wide range of signaling pathways through selectively interacting with specific transcription factors.

MeSH Terms
Abscisic Acid/metabolism Arabidopsis/cytology,genetics,physiology Arabidopsis Proteins/genetics,metabolism Basic Helix-Loop-Helix Leucine Zipper Transcription Factors/genetics,metabolism Basic-Leucine Zipper Transcription Factors/genetics,metabolism Cyclopentanes/metabolism DNA-Binding Proteins Flowers/cytology,genetics,physiology Gene Expression Regulation, Plant/physiology Germination Mutation Nuclear Proteins/genetics,metabolism Oxylipins/metabolism Plant Growth Regulators/metabolism Plant Leaves/cytology,genetics,physiology Plant Roots/cytology,genetics,physiology Plants, Genetically Modified Promoter Regions, Genetic Protein Interaction Mapping Protein Structure, Tertiary Seedlings/cytology,genetics,physiology Seeds/cytology,genetics,physiology Signal Transduction/physiology Time Factors
Chemicals
ABI5 protein, Arabidopsis Arabidopsis Proteins Basic Helix-Loop-Helix Leucine Zipper Transcription Factors Basic-Leucine Zipper Transcription Factors Cyclopentanes DNA-Binding Proteins MYC2 protein, Arabidopsis Nuclear Proteins Oxylipins PFT1 protein, Arabidopsis Plant Growth Regulators jasmonic acid Abscisic Acid
Authors & Affiliations
11 authors, click to expand affiliations / ORCID
Chen Rong
State Key Laboratory of Plant Genomics, National Centre for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Jiang Hongling
Li Lin
Zhai Qingzhe
Qi Linlin
Zhou Wenkun
Liu Xiaoqiang
Li Hongmei
Zheng Wenguang
Sun Jiaqiang
Li Chuanyou
References (101)
101 references, click to expand
  1. Regulation of flowering time by light quality.
    Nature. 2003 Jun 19;423(6942):881-5 PMID: 12815435
  2. The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor.
    Plant Cell. 2009 Aug;21(8):2220-36 PMID: 19717617
  3. Diverse roles of the Mediator complex in plants.
    Semin Cell Dev Biol. 2011 Sep;22(7):741-8 PMID: 21803167
  4. HUA ENHANCER3 reveals a role for a cyclin-dependent protein kinase in the specification of floral organ identity in Arabidopsis.
    Development. 2004 Jul;131(13):3147-56 PMID: 15175247
  5. The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis.
    Plant Cell. 2002 Aug;14(8):1919-35 PMID: 12172031
  6. The Arabidopsis RING finger E3 ligase RHA2b acts additively with RHA2a in regulating abscisic acid signaling and drought response.
    Plant Physiol. 2011 Jun;156(2):550-63 PMID: 21478367
  7. MED25 is distinct from TRAP220/MED1 in cooperating with CBP for retinoid receptor activation.
    EMBO J. 2007 Aug 8;26(15):3545-57 PMID: 17641689
  8. The Jasmonate-ZIM domain proteins interact with the R2R3-MYB transcription factors MYB21 and MYB24 to affect Jasmonate-regulated stamen development in Arabidopsis.
    Plant Cell. 2011 Mar;23(3):1000-13 PMID: 21447791
  9. DELLAs modulate jasmonate signaling via competitive binding to JAZs.
    Dev Cell. 2010 Dec 14;19(6):884-94 PMID: 21145503
  10. Bestatin, an inhibitor of aminopeptidases, provides a chemical genetics approach to dissect jasmonate signaling in Arabidopsis.
    Plant Physiol. 2006 Aug;141(4):1400-13 PMID: 16798948
  11. Jasmonate and phytochrome A signaling in Arabidopsis wound and shade responses are integrated through JAZ1 stability.
    Plant Cell. 2010 Apr;22(4):1143-60 PMID: 20435902
  12. MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis.
    Plant Cell. 2007 Jul;19(7):2225-45 PMID: 17616737
  13. Profiling histone modification patterns in plants using genomic tiling microarrays.
    Nat Methods. 2005 Mar;2(3):213-8 PMID: 16163802
  14. Resistance to Pseudomonas syringae conferred by an Arabidopsis thaliana coronatine-insensitive (coi1) mutation occurs through two distinct mechanisms.
    Plant J. 2001 Jun;26(5):509-22 PMID: 11439137
  15. Ordered recruitment of histone acetyltransferases and the TRAP/Mediator complex to thyroid hormone-responsive promoters in vivo.
    Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7934-9 PMID: 12034878
  16. The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis.
    Plant Cell. 2004 Aug;16(8):2117-27 PMID: 15258265
  17. Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
    Nature. 2010 Nov 18;468(7322):400-5 PMID: 20927106
  18. Isolation and characterization of HsfA3, a new heat stress transcription factor of Lycopersicon peruvianum.
    Plant J. 2000 May;22(4):355-65 PMID: 10849352
  19. The mediator complex subunit PFT1 is a key regulator of jasmonate-dependent defense in Arabidopsis.
    Plant Cell. 2009 Aug;21(8):2237-52 PMID: 19671879
  20. Regulation of Arabidopsis thaliana Em genes: role of ABI5.
    Plant J. 2002 May;30(3):373-83 PMID: 12000684
  21. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses.
    Plant Cell. 2011 Feb;23(2):701-15 PMID: 21335373
  22. Arabidopsis ASA1 is important for jasmonate-mediated regulation of auxin biosynthesis and transport during lateral root formation.
    Plant Cell. 2009 May;21(5):1495-511 PMID: 19435934
  23. A mediator required for activation of RNA polymerase II transcription in vitro.
    Nature. 1991 Apr 4;350(6317):436-8 PMID: 2011193
  24. Plant mediator: mediating the jasmonate response.
    Plant Signal Behav. 2010 Jun;5(6):718-20 PMID: 20383062
  25. COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility.
    Science. 1998 May 15;280(5366):1091-4 PMID: 9582125
  26. A screen for genes that function in abscisic acid signaling in Arabidopsis thaliana.
    Genetics. 2002 Jul;161(3):1247-55 PMID: 12136027
  27. NINJA connects the co-repressor TOPLESS to jasmonate signalling.
    Nature. 2010 Apr 1;464(7289):788-91 PMID: 20360743
  28. Oligosaccharins, brassinolides, and jasmonates: nontraditional regulators of plant growth, development, and gene expression.
    Plant Cell. 1997 Jul;9(7):1211-23 PMID: 9254935
  29. The activator-recruited cofactor/Mediator coactivator subunit ARC92 is a functionally important target of the VP16 transcriptional activator.
    Proc Natl Acad Sci U S A. 2004 Feb 24;101(8):2339-44 PMID: 14983011
  30. Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit.
    Mol Cell. 2007 Jun 8;26(5):717-29 PMID: 17560376
  31. Jasmonate signaling: a conserved mechanism of hormone sensing.
    Curr Opin Plant Biol. 2008 Aug;11(4):428-35 PMID: 18583180
  32. Isolation and characterization of novel mutant loci suppressing the ABA hypersensitivity of the Arabidopsis coronatine insensitive 1-16 (coi1-16) mutant during germination and seedling growth.
    Plant Cell Physiol. 2012 Jan;53(1):53-63 PMID: 22156383
  33. Two Methyl Jasmonate-Insensitive Mutants Show Altered Expression of AtVsp in Response to Methyl Jasmonate and Wounding.
    Plant Physiol. 1996 Jun;111(2):525-531 PMID: 12226307
  34. A downstream mediator in the growth repression limb of the jasmonate pathway.
    Plant Cell. 2007 Aug;19(8):2470-83 PMID: 17675405
  35. ABA-mediated transcriptional regulation in response to osmotic stress in plants.
    J Plant Res. 2011 Jul;124(4):509-25 PMID: 21416314
  36. Two GCC boxes and AP2/ERF-domain transcription factor ORA59 in jasmonate/ethylene-mediated activation of the PDF1.2 promoter in Arabidopsis.
    Plant Mol Biol. 2011 Mar;75(4-5):321-31 PMID: 21246258
  37. Imaging protein-protein interactions in plant cells by bimolecular fluorescence complementation assay.
    Trends Plant Sci. 2009 Feb;14(2):59-63 PMID: 19150604
  38. The Arabidopsis RING finger E3 ligase RHA2a is a novel positive regulator of abscisic acid signaling during seed germination and early seedling development.
    Plant Physiol. 2009 May;150(1):463-81 PMID: 19286935
  39. A structural perspective on Mediator function.
    Curr Opin Cell Biol. 2012 Jun;24(3):305-13 PMID: 22341791
  40. A conditionally fertile coi1 allele indicates cross-talk between plant hormone signalling pathways in Arabidopsis thaliana seeds and young seedlings.
    Planta. 2002 Aug;215(4):549-56 PMID: 12172836
  41. Top hits in contemporary JAZ: an update on jasmonate signaling.
    Phytochemistry. 2009 Sep;70(13-14):1547-59 PMID: 19800644
  42. JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling.
    Nature. 2007 Aug 9;448(7154):661-5 PMID: 17637677
  43. Med25 is required for RNA polymerase II recruitment to specific promoters, thus regulating xenobiotic and lipid metabolism in human liver.
    Mol Cell Biol. 2011 Feb;31(3):466-81 PMID: 21135126
  44. Systemin/Jasmonate-mediated systemic defense signaling in tomato.
    Mol Plant. 2011 Jul;4(4):607-15 PMID: 21357647
  45. A postgermination developmental arrest checkpoint is mediated by abscisic acid and requires the ABI5 transcription factor in Arabidopsis.
    Proc Natl Acad Sci U S A. 2001 Apr 10;98(8):4782-7 PMID: 11287670
  46. ABI5 acts downstream of ABI3 to execute an ABA-dependent growth arrest during germination.
    Plant J. 2002 Nov;32(3):317-28 PMID: 12410810
  47. The basic helix-loop-helix transcription factor MYC2 directly represses PLETHORA expression during jasmonate-mediated modulation of the root stem cell niche in Arabidopsis.
    Plant Cell. 2011 Sep;23(9):3335-52 PMID: 21954460
  48. Jasmonate: an oxylipin signal with many roles in plants.
    Vitam Horm. 2005;72:431-56 PMID: 16492478
  49. A novel mediator between activator proteins and the RNA polymerase II transcription apparatus.
    Cell. 1990 Jun 29;61(7):1209-15 PMID: 2163759
  50. Arabidopsis thaliana Atvsp is homologous to soybean VspA and VspB, genes encoding vegetative storage protein acid phosphatases, and is regulated similarly by methyl jasmonate, wounding, sugars, light and phosphate.
    Plant Mol Biol. 1995 Mar;27(5):933-42 PMID: 7766883
  51. Pathogen-induced systemic activation of a plant defensin gene in Arabidopsis follows a salicylic acid-independent pathway.
    Plant Cell. 1996 Dec;8(12):2309-23 PMID: 8989885
  52. JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis.
    Plant Cell. 2004 Jul;16(7):1938-50 PMID: 15208388
  53. Wwp2 is essential for palatogenesis mediated by the interaction between Sox9 and mediator subunit 25.
    Nat Commun. 2011;2:251 PMID: 21427722
  54. Sex-biased lethality or transmission of defective transcription machinery in Arabidopsis.
    Genetics. 2008 Sep;180(1):207-18 PMID: 18723889
  55. Jasmonate-inducible gene: What does it mean?
    Trends Plant Sci. 2009 Feb;14(2):87-91 PMID: 19162528
  56. Mediator-dependent nuclear receptor function.
    Semin Cell Dev Biol. 2011 Sep;22(7):749-58 PMID: 21854863
  57. The metazoan Mediator co-activator complex as an integrative hub for transcriptional regulation.
    Nat Rev Genet. 2010 Nov;11(11):761-72 PMID: 20940737
  58. Methyl jasmonate inhibition of root growth and induction of a leaf protein are decreased in an Arabidopsis thaliana mutant.
    Proc Natl Acad Sci U S A. 1992 Aug 1;89(15):6837-40 PMID: 11607311
  59. Jasmonates: structural requirements for lipid-derived signals active in plant stress responses and development.
    ACS Chem Biol. 2010 Jan 15;5(1):63-77 PMID: 20025249
  60. KEEP ON GOING, a RING E3 ligase essential for Arabidopsis growth and development, is involved in abscisic acid signaling.
    Plant Cell. 2006 Dec;18(12):3415-28 PMID: 17194765
  61. The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana.
    EMBO J. 2011 Mar 2;30(5):814-22 PMID: 21252857
  62. The Arabidopsis thaliana Med25 mediator subunit integrates environmental cues to control plant development.
    Proc Natl Acad Sci U S A. 2011 May 17;108(20):8245-50 PMID: 21536906
  63. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis.
    Plant Cell. 2002 Jun;14(6):1391-403 PMID: 12084834
  64. Function and regulation of the Mediator complex.
    Curr Opin Genet Dev. 2011 Apr;21(2):225-30 PMID: 21330129
  65. Derepression of ethylene-stabilized transcription factors (EIN3/EIL1) mediates jasmonate and ethylene signaling synergy in Arabidopsis.
    Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12539-44 PMID: 21737749
  66. Isolation and characterization of high temperature-resistant germination mutants of Arabidopsis thaliana.
    Plant Cell Physiol. 2006 Aug;47(8):1081-94 PMID: 16816409
  67. The Jasmonate-ZIM-domain proteins interact with the WD-Repeat/bHLH/MYB complexes to regulate Jasmonate-mediated anthocyanin accumulation and trichome initiation in Arabidopsis thaliana.
    Plant Cell. 2011 May;23(5):1795-814 PMID: 21551388
  68. Jasmonate signaling: toward an integrated view.
    Plant Physiol. 2008 Apr;146(4):1459-68 PMID: 18390489
  69. A tomato enzyme synthesizes (+)-7-iso-jasmonoyl-L-isoleucine in wounded leaves.
    Planta. 2010 Feb;231(3):717-28 PMID: 20012084
  70. The MED12-MED13 module of Mediator regulates the timing of embryo patterning in Arabidopsis.
    Development. 2010 Jan;137(1):113-22 PMID: 20023166
  71. Antagonistic interaction between abscisic acid and jasmonate-ethylene signaling pathways modulates defense gene expression and disease resistance in Arabidopsis.
    Plant Cell. 2004 Dec;16(12):3460-79 PMID: 15548743
  72. Interactions between subunits of the Mediator complex with gene-specific transcription factors.
    Semin Cell Dev Biol. 2011 Sep;22(7):759-68 PMID: 21839847
  73. Mediator complex proteins are required for diverse developmental processes.
    Semin Cell Dev Biol. 2011 Sep;22(7):769-75 PMID: 21854862
  74. The JAZ family of repressors is the missing link in jasmonate signalling.
    Nature. 2007 Aug 9;448(7154):666-71 PMID: 17637675
  75. Control of final organ size by Mediator complex subunit 25 in Arabidopsis thaliana.
    Development. 2011 Oct;138(20):4545-54 PMID: 21903673
  76. The jasmonate signal pathway.
    Plant Cell. 2002;14 Suppl:S153-64 PMID: 12045275
  77. Plant immunity to insect herbivores.
    Annu Rev Plant Biol. 2008;59:41-66 PMID: 18031220
  78. AFP is a novel negative regulator of ABA signaling that promotes ABI5 protein degradation.
    Genes Dev. 2003 Feb 1;17(3):410-8 PMID: 12569131
  79. Jasmonates: an update on biosynthesis, signal transduction and action in plant stress response, growth and development.
    Ann Bot. 2007 Oct;100(4):681-97 PMID: 17513307
  80. ABA is an essential signal for plant resistance to pathogens affecting JA biosynthesis and the activation of defenses in Arabidopsis.
    Plant Cell. 2007 May;19(5):1665-81 PMID: 17513501
  81. TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis.
    Science. 2008 Mar 7;319(5868):1384-6 PMID: 18258861
  82. Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis.
    Genes Dev. 2009 Dec 15;23(24):2850-60 PMID: 19948763
  83. MACCHI-BOU 2 is required for early embryo patterning and cotyledon organogenesis in Arabidopsis.
    Plant Cell Physiol. 2011 Mar;52(3):539-52 PMID: 21257604
  84. The plant Mediator and its role in noncoding RNA production.
    Front Biol (Beijing). 2011 Apr 1;6(2):125-132 PMID: 21822419
  85. Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling.
    Plant Cell. 2003 Jan;15(1):63-78 PMID: 12509522
  86. (+)-7-iso-Jasmonoyl-L-isoleucine is the endogenous bioactive jasmonate.
    Nat Chem Biol. 2009 May;5(5):344-50 PMID: 19349968
  87. Jasmonate passes muster: a receptor and targets for the defense hormone.
    Annu Rev Plant Biol. 2009;60:183-205 PMID: 19025383
  88. Cell numbers and leaf development in Arabidopsis: a functional analysis of the STRUWWELPETER gene.
    EMBO J. 2002 Nov 15;21(22):6036-49 PMID: 12426376
  89. The Arabidopsis thaliana JASMONATE INSENSITIVE 1 gene is required for suppression of salicylic acid-dependent defenses during infection by Pseudomonas syringae.
    Mol Plant Microbe Interact. 2006 Jul;19(7):789-800 PMID: 16838791
  90. Structure of eukaryotic Mediator complexes.
    Trends Biochem Sci. 2005 May;30(5):264-71 PMID: 15896745
  91. Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis.
    Genes Dev. 2004 Jul 1;18(13):1577-91 PMID: 15231736
  92. The expression of a rab-related gene, rab18, is induced by abscisic acid during the cold acclimation process of Arabidopsis thaliana (L.) Heynh.
    Plant Mol Biol. 1992 Dec;20(5):951-62 PMID: 1463831
  93. Proteasome-mediated turnover of the transcription coactivator NPR1 plays dual roles in regulating plant immunity.
    Cell. 2009 May 29;137(5):860-72 PMID: 19490895
  94. Control of gene transcription by Mediator in chromatin.
    Semin Cell Dev Biol. 2011 Sep;22(7):735-40 PMID: 21864698
  95. Physical interactions between ABA response loci of Arabidopsis.
    Plant J. 2001 Jun;26(6):627-35 PMID: 11489176
  96. Dynamic regulation of pol II transcription by the mammalian Mediator complex.
    Trends Biochem Sci. 2005 May;30(5):256-63 PMID: 15896744
  97. A novel docking site on Mediator is critical for activation by VP16 in mammalian cells.
    EMBO J. 2003 Dec 15;22(24):6494-504 PMID: 14657022
  98. A high-throughput screening system for Arabidopsis transcription factors and its application to Med25-dependent transcriptional regulation.
    Mol Plant. 2011 May;4(3):546-55 PMID: 21343311
  99. Auxin receptors and plant development: a new signaling paradigm.
    Annu Rev Cell Dev Biol. 2008;24:55-80 PMID: 18631113
  100. Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation.
    Cell. 2005 Mar 11;120(5):613-22 PMID: 15766525
  101. The Arabidopsis homologs of CCR4-associated factor 1 show mRNA deadenylation activity and play a role in plant defence responses.
    Cell Res. 2009 Mar;19(3):307-16 PMID: 19065152
Article Info
Journal
The Plant cell
Abbr.
Plant Cell
ISSN
1532-298X
Published
2012-07-00
Epub
2012-00-20
Pages
2898-916
Language
English
Region
England
NLM ID
9208688
PMCID
PMC3426122
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]