Home LiteratureArticle Details
PMID: 2308839 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Structure and transcription of a human gene for H1 RNA, the RNA component of human RNase P.

Nucleic acids research ·Vol. 18 ·No. 1 ·1990-01-11 ·Pages 97-103

Baer M, Nilsen TW, Costigan C, Altman S

Abstract

The gene coding for H1 RNA, the RNA component of human RNase P, has been isolated and characterized from a human genomic DNA library. The sequence corresponding to the mature H1 RNA is almost identical to that previously identified using H1 RNA and a cDNA clone corresponding to it. The nucleotide sequence of the genomic clone contains an array of potential transcriptional control elements, some characteristic of transcription by RNA polymerase III and some characteristic of RNA polymerase II, as is also the case for U6 and certain other small stable RNAs. The transcription in vitro of the genomic clone shows that the gene is functional and is transcribed by RNA polymerase III. Southern hybridization analysis indicates that there is very likely only one copy of the gene for H1 RNA in the human genome.

MeSH Terms
Base Sequence Chromosome Mapping Chromosomes, Human, Pair 14 Cloning, Molecular Endoribonucleases/genetics Gene Expression Regulation Genes Humans Molecular Sequence Data Promoter Regions, Genetic RNA Polymerase III/metabolism Regulatory Sequences, Nucleic Acid Ribonuclease P Transcription, Genetic
Chemicals
RNA Polymerase III Endoribonucleases RPP14 protein, human Ribonuclease P
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Baer M
Department of Biology, Yale University, New Haven, CT 06520.
Nilsen T W
Costigan C
Altman S
References (28)
28 references, click to expand
  1. A sequence upstream from the coding region is required for the transcription of the 7SK RNA genes.
    Nucleic Acids Res. 1986 Dec 9;14(23):9243-60 PMID: 2948154
  2. A 7 bp mutation converts a human RNA polymerase II snRNA promoter into an RNA polymerase III promoter.
    Cell. 1989 Jul 14;58(1):55-67 PMID: 2752422
  3. Electrophoretic patterns of deadenylylated chorion and globin mRNAs.
    Proc Natl Acad Sci U S A. 1975 Aug;72(8):2959-63 PMID: 1059086
  4. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  5. Faithful transcription of eukaryotic genes by RNA polymerase III in systems reconstituted with purified DNA templates.
    J Biol Chem. 1979 Jul 10;254(13):6163-73 PMID: 447704
  6. A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.
    Cell. 1980 Jan;19(1):27-35 PMID: 7357604
  7. Nucleotide sequences in Xenopus 5S DNA required for transcription termination.
    Cell. 1981 Apr;24(1):261-70 PMID: 6263489
  8. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.
    Nucleic Acids Res. 1983 Mar 11;11(5):1475-89 PMID: 6828386
  9. Common and interchangeable elements in the promoters of genes transcribed by RNA polymerase iii.
    Cell. 1983 Mar;32(3):725-33 PMID: 6299574
  10. Aspects of biochemical catalysis.
    Cell. 1984 Feb;36(2):237-9 PMID: 6198091
  11. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  12. Upstream sequences modulate the internal promoter of the human 7SL RNA gene.
    Nature. 1985 Nov 28-Dec 4;318(6044):371-4 PMID: 2415825
  13. Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information.
    Annu Rev Biochem. 1986;55:631-61 PMID: 2427017
  14. A rapid biochemical method for purifying lambda DNA from phage lysates.
    Nucleic Acids Res. 1986 Aug 26;14(16):6767 PMID: 2944078
  15. A common octamer motif binding protein is involved in the transcription of U6 snRNA by RNA polymerase III and U2 snRNA by RNA polymerase II.
    Cell. 1987 Oct 9;51(1):71-9 PMID: 3652209
  16. The in vitro transcription of the 7SK RNA gene by RNA polymerase III is dependent only on the presence of an upstream promoter.
    Cell. 1987 Oct 9;51(1):81-7 PMID: 3652210
  17. tRNA-like structures tag the 3' ends of genomic RNA molecules for replication: implications for the origin of protein synthesis.
    Proc Natl Acad Sci U S A. 1987 Nov;84(21):7383-7 PMID: 3478699
  18. Distinct factors with Sp1 and NF-A specificities bind to adjacent functional elements of the human U2 snRNA gene enhancer.
    Genes Dev. 1987 Oct;1(8):808-17 PMID: 3428599
  19. Upstream elements required for efficient transcription of a human U6 RNA gene resemble those of U1 and U2 genes even though a different polymerase is used.
    Genes Dev. 1988 Feb;2(2):196-204 PMID: 3360322
  20. Upstream regulatory elements are necessary and sufficient for transcription of a U6 RNA gene by RNA polymerase III.
    EMBO J. 1988 Feb;7(2):503-12 PMID: 3366121
  21. Trans-acting protein factors and the regulation of eukaryotic transcription: lessons from studies on DNA tumor viruses.
    Genes Dev. 1988 Mar;2(3):267-81 PMID: 3288540
  22. The Alu family developed through successive waves of fixation closely connected with primate lineage history.
    J Mol Evol. 1988;27(3):194-202 PMID: 3138422
  23. Changing the RNA polymerase specificity of U snRNA gene promoters.
    Cell. 1988 Nov 4;55(3):435-42 PMID: 3180217
  24. Mouse RNAase MRP RNA is encoded by a nuclear gene and contains a decamer sequence complementary to a conserved region of mitochondrial RNA substrate.
    Cell. 1989 Jan 13;56(1):131-9 PMID: 2910496
  25. A review of genomic physical mapping.
    Cancer Surv. 1988;7(2):267-94 PMID: 3066475
  26. Epstein-Barr virus small RNA (EBER) genes: unique transcription units that combine RNA polymerase II and III promoter elements.
    Cell. 1989 Jun 2;57(5):825-34 PMID: 2541926
  27. Identification and characterization of an RNA molecule that copurifies with RNase P activity from HeLa cells.
    Genes Dev. 1989 Apr;3(4):488-99 PMID: 2470644
  28. Xenopus tropicalis U6 snRNA genes transcribed by Pol III contain the upstream promoter elements used by Pol II dependent U snRNA genes.
    Nucleic Acids Res. 1987 Mar 25;15(6):2463-78 PMID: 3031599
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1990-01-11
Pages
97-103
Language
English
Region
England
NLM ID
0411011
PMCID
PMC330208
Subset
IM
Grants
NIGMS NIH HHS · GM-19422 · United States
NIGMS NIH HHS · GM-31528 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]