Home LiteratureArticle Details
PMID: 24226741 Published · ppublish English Journal Article

Variation in the ribosomal DNA intergenic spacer of a maize population mass-selected for high grain yield.

Rocheford TR, Osterman JC, Gardner CO

Abstract

Variation in the intergenic spacer of ribosomal DNA (rDNA) was detected among individual plants of the open-pollinated maize variety 'Hays Golden' and populations derived from this variety. rDNA intergenic spacer-length variants were detected at approximately 200 bp intervals, consistent with the number of 200 bp subrepeats as the basis for this variation. Inheritance data revealed that more than one spacer-length class may be present on an individual chromosome. Fourteen different predominant rDNA intergenic spacer hybridization fragment patterns were detected. C-29, a population developed by 29 cycles of mass-selecting Hay Golden for high grain yield, exhibited a significant change in rDNA intergenic spacer hybridization fragment pattern composition in comparison to Hays Golden. This change included a reduction in frequency of the shortest predominant space-length variant (3.4 kb) and an increase in a 5.2 -kb hybridization fragment. I-31, a population developed through thermal neutron irradiation of Hays Golden and 31 generations of mass selection for high grain yield, did not exhibit a significant change in overall rDNA intergenic spacer composition. I-31 did exhibit an increase in frequency of the 5.2-kb hybridization fragment and a significant change in two specific hybridization fragment patterns that had also changed in C-29. These data, particularly for the C-29 population, suggest that rDNA intergenic spacer-length variants and/or associated loci were influenced by selection.

Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Rocheford T R
Department of Agronomy, University of Nebraska, 68583, Lincoln, NE, USA.
Osterman J C
Gardner C O
References (19)
19 references, click to expand
  1. Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics.
    Proc Natl Acad Sci U S A. 1984 Dec;81(24):8014-8 PMID: 6096873
  2. Ribosomal gene structure, variation and inheritance in maize and its ancestors.
    Genetics. 1988 Dec;120(4):1125-36 PMID: 2906307
  3. Inheritance of rDNA spacer length variants in man.
    Mol Gen Genet. 1984;196(1):141-5 PMID: 6090864
  4. Ribosomal RNA genes in plants: variability in copy number and in the intergenic spacer.
    Plant Mol Biol. 1987 Sep;9(5):509-20 PMID: 24277137
  5. Variation in the ribosomal RNA genes among individuals of Vicia faba.
    Plant Mol Biol. 1986 Sep;6(5):339-45 PMID: 24307384
  6. Occurrence of 9 homologous repeat units in the external spacer region of a nuclear maize rRNA gene unit.
    Nucleic Acids Res. 1986 Jun 25;14(12):4969-86 PMID: 3014440
  7. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  8. Spacer regulation of Xenopus ribosomal gene transcription: competition in oocytes.
    Cell. 1983 Dec;35(2 Pt 1):449-56 PMID: 6652676
  9. Rapid transfer of DNA from agarose gels to nylon membranes.
    Nucleic Acids Res. 1985 Oct 25;13(20):7207-21 PMID: 4059056
  10. Rate of turnover of structural variants in the rDNA gene family of Drosophila melanogaster.
    Nature. 1982 Feb 18;295(5850):564-8 PMID: 6799840
  11. Dynamics of concerted evolution of ribosomal DNA and histone gene families in the melanogaster species subgroup of Drosophila.
    J Mol Biol. 1982 Jun 15;158(1):17-35 PMID: 6811755
  12. Unequal crossing over in the ribosomal DNA of Saccharomyces cerevisiae.
    Nature. 1980 Apr 3;284(5755):426-30 PMID: 6987539
  13. Pol I transcription: which comes first, the end or the beginning?
    Cell. 1986 Dec 26;47(6):839-40 PMID: 3536127
  14. A transcriptional function for the repetitive ribosomal spacer in Xenopus laevis.
    Nature. 1983 Mar 17-23;302(5905):223-8 PMID: 6835360
  15. Evolution of repeated DNA sequences by unequal crossover.
    Science. 1976 Feb 13;191(4227):528-35 PMID: 1251186
  16. Correlations between development rates, enzyme activities, ribosomal DNA spacer-length phenotypes, and adaptation in Drosophila melanogaster.
    Proc Natl Acad Sci U S A. 1987 Jan;84(2):610-4 PMID: 3099299
  17. Patterns of ribosomal DNA spacer lengths are inherited.
    J Mol Biol. 1976 Aug 25;105(4):507-16 PMID: 972393
  18. The wheat ribosomal DNA spacer region: Its structure and variation in populations and among species.
    Theor Appl Genet. 1982 Dec;63(4):337-48 PMID: 24270871
  19. The structure of the maize ribosomal DNA spacer region.
    Nucleic Acids Res. 1986 Jun 25;14(12):4953-68 PMID: 3725589
Article Info
Journal
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Abbr.
Theor Appl Genet
ISSN
0040-5752
Published
1990-06-00
Pages
793-800
Language
English
Region
Germany
NLM ID
0145600
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]