Home LiteratureArticle Details
PMID: 2429304 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

A temperature-dependent pBR322 copy number mutant resulting from a Tn5 position effect.

Lupski JR, Projan SJ, Ozaki LS, Godson GN

Abstract

In the process of randomly mutagenizing a recombinant pBR322 clone with transposon Tn5, a high copy number plasmid mutant, pLO88, has been isolated. The copy number phenotype of pLO88 is observed only at elevated temperatures, greater than or equal to 37 degrees C, and is due to the precise position of a Tn5 insertion. Nucleotide sequence of the Tn5-pBR322 junction reveals that Tn5-88 has inserted into an open reading frame that codes for a 63 amino acid protein previously shown to negatively regulate pBR322 plasmid copy number. By deleting portions of the Tn5 it is shown that the copy number phenotype is due not only to the insertion of Tn5 in pBR322 but also to the requirement that some Tn5 sequences remain intact. It appears that an outwardly directed Tn5 promoter initiates the synthesis of a transcript (RNA X) that interferes with the normal repressor RNA (RNA I)-primer RNA (RNA II) interaction at elevated temperatures.

MeSH Terms
DNA Replication DNA Transposable Elements Mutation Plasmids RNA, Bacterial/genetics Temperature
Chemicals
DNA Transposable Elements RNA, Bacterial
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Lupski J R
Projan S J
Ozaki L S
Godson G N
References (53)
53 references, click to expand
  1. A complementation analysis of the restriction and modification of DNA in Escherichia coli.
    J Mol Biol. 1969 May 14;41(3):459-72 PMID: 4896022
  2. Specificity of Tn5 insertions into a 36-bp DNA sequence repeated in tandem seven times.
    Gene. 1984 Oct;30(1-3):99-106 PMID: 6096228
  3. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  4. RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination.
    Biochemistry. 1977 Oct 18;16(21):4743-51 PMID: 911786
  5. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  6. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.
    Gene. 1977;2(2):95-113 PMID: 344137
  7. In vitro mutagenesis of a circular DNA molecule by using synthetic restriction sites.
    Proc Natl Acad Sci U S A. 1978 Dec;75(12):6012-6 PMID: 366607
  8. The genetics and regulation of heat-shock proteins.
    Annu Rev Genet. 1984;18:295-329 PMID: 6442118
  9. Characterization of the ColE1 primer-RNA1 complex: analysis of a domain of ColE1 RNA1 necessary for its interaction with primer RNA.
    Proc Natl Acad Sci U S A. 1985 Apr;82(8):2257-61 PMID: 2581244
  10. Completion of the nucleotide sequence of the central region of Tn5 confirms the presence of three resistance genes.
    Nucleic Acids Res. 1985 Jan 11;13(1):195-205 PMID: 3889831
  11. Alternative conformations of the ColE1 replication primer modulate its interaction with RNA I.
    Cell. 1985 Oct;42(3):959-66 PMID: 2414014
  12. Control of primer formation for ColE1 plasmid replication: conformational change of the primer transcript.
    Cell. 1986 Jan 17;44(1):125-36 PMID: 2416472
  13. RNase H and replication of ColE1 DNA in Escherichia coli.
    J Bacteriol. 1986 Apr;166(1):143-7 PMID: 2870052
  14. Penicillinase plasmids of Staphylococcus aureus: restriction-deletion maps.
    Plasmid. 1979 Jan;2(1):109-29 PMID: 314115
  15. Complete nucleotide sequence of the Escherichia coli plasmid pBR322.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 1:77-90 PMID: 383387
  16. Role of plasmid-coded RNA and ribonuclease III in plasmid DNA replication.
    Cell. 1979 Sep;18(1):61-71 PMID: 389434
  17. Trans-complementable copy-number mutants of plasmid ColE1.
    Nature. 1980 Jan 10;283(5743):216-8 PMID: 7350544
  18. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.
    Biochemistry. 1979 Nov 27;18(24):5294-9 PMID: 518835
  19. A restriction enzyme cleavage map of Tn5 and location of a region encoding neomycin resistance.
    Mol Gen Genet. 1979;177(1):65-72 PMID: 231729
  20. Polarity of Tn5 insertion mutations in Escherichia coli.
    J Bacteriol. 1980 May;142(2):439-46 PMID: 6247321
  21. Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H.
    Proc Natl Acad Sci U S A. 1980 May;77(5):2450-4 PMID: 6156450
  22. Inhibition of ColE1 RNA primer formation by a plasmid-specified small RNA.
    Proc Natl Acad Sci U S A. 1981 Mar;78(3):1421-5 PMID: 6165011
  23. Analysis of mini-F plasmid replication by transposition mutagenesis.
    J Bacteriol. 1981 Sep;147(3):888-99 PMID: 6268613
  24. Base pairing of RNA I with its complementary sequence in the primer precursor inhibits ColE1 replication.
    Nature. 1981 Dec 17;294(5842):623-6 PMID: 6171736
  25. Plasmid ColE1 incompatibility determined by interaction of RNA I with primer transcript.
    Proc Natl Acad Sci U S A. 1981 Oct;78(10):6096-100 PMID: 6171811
  26. Cloning and characterization of the Escherichia coli chromosomal region surrounding the dnaG Gene, with a correlated physical and genetic map of dnaG generated via transposon Tn5 mutagenesis.
    Mol Gen Genet. 1982;185(1):120-8 PMID: 6283308
  27. ColE1 vectors for direct selection of cells carrying a hybrid plasmid.
    J Biochem. 1982 Apr;91(4):1155-62 PMID: 6212580
  28. Temperature-sensitive copy number mutants of CoIE1 are located in an untranslated region of the plasmid genome.
    Proc Natl Acad Sci U S A. 1982 Jun;79(11):3570-4 PMID: 6179081
  29. Control of ColE1 DNA replication: the rop gene product negatively affects transcription from the replication primer promoter.
    Proc Natl Acad Sci U S A. 1982 Oct;79(20):6313-7 PMID: 6183660
  30. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
    Gene. 1982 Oct;19(3):269-76 PMID: 6295880
  31. Nucleotide sequence and exact localization of the neomycin phosphotransferase gene from transposon Tn5.
    Gene. 1982 Oct;19(3):327-36 PMID: 6295884
  32. Specific cleavage of the p15A primer precursor by ribonuclease H at the origin of DNA replication.
    Proc Natl Acad Sci U S A. 1982 Dec;79(23):7082-6 PMID: 6185945
  33. Structural requirement for IS50-mediated gene transposition.
    Proc Natl Acad Sci U S A. 1983 Feb;80(3):792-6 PMID: 6298776
  34. Cloning and expression in E. coli of the malarial sporozoite surface antigen gene from Plasmodium knowlesi.
    Nature. 1983 Apr 7;302(5908):536-8 PMID: 6339949
  35. Regulation of the rpsU-dnaG-rpoD macromolecular synthesis operon and the initiation of DNA replication in Escherichia coli K-12.
    Mol Gen Genet. 1983;189(1):48-57 PMID: 6222240
  36. Compilation and analysis of Escherichia coli promoter DNA sequences.
    Nucleic Acids Res. 1983 Apr 25;11(8):2237-55 PMID: 6344016
  37. Regulatory regions of ColE1 that are involved in determination of plasmid copy number.
    Proc Natl Acad Sci U S A. 1983 Jun;80(11):3232-6 PMID: 6304700
  38. Determination of plasmid copy number by fluorescence densitometry.
    Plasmid. 1983 Mar;9(2):182-90 PMID: 6344110
  39. Localization of a Plasmodium surface antigen epitope by Tn5 mutagenesis mapping of a recombinant cDNA clone.
    Science. 1983 Jun 17;220(4603):1285-8 PMID: 6190227
  40. Revised sequence of the tetracycline-resistance gene of pBR322.
    Gene. 1983 May-Jun;22(2-3):277-80 PMID: 6307828
  41. Identification and chemical synthesis of a tandemly repeated immunogenic region of Plasmodium knowlesi circumsporozoite protein.
    Nature. 1983 Sep 1-7;305(5929):29-33 PMID: 6193427
  42. Suppressors of a temperature-sensitive copy-number mutation in plasmid NTP1.
    Mol Gen Genet. 1983;192(1-2):95-100 PMID: 6196607
  43. Effects of point mutations on formation and structure of the RNA primer for ColE1 DNA replication.
    Cell. 1984 Feb;36(2):513-22 PMID: 6198094
  44. DNA replication regulated by the priming promoter.
    Nucleic Acids Res. 1984 Mar 26;12(6):2641-8 PMID: 6369250
  45. Transcription from efficient promoters can interfere with plasmid replication and diminish expression of plasmid specified genes.
    EMBO J. 1982;1(11):1399-404 PMID: 6327267
  46. The use of transposon Tn5 mutagenesis in the rapid generation of correlated physical and genetic maps of DNA segments cloned into multicopy plasmids--a review.
    Gene. 1984 Feb;27(2):131-49 PMID: 6327463
  47. Control of initiation of pMB1 replication: purified Rop protein and RNA I affect primer formation in vitro.
    Cell. 1984 Jul;37(3):1009-14 PMID: 6204765
  48. Control of pMB1 replication: inhibition of primer formation by Rop requires RNA1.
    EMBO J. 1984 Jun;3(6):1365-9 PMID: 6204861
  49. The htpR gene product of E. coli is a sigma factor for heat-shock promoters.
    Cell. 1984 Sep;38(2):383-90 PMID: 6380765
  50. Promotion, termination, and anti-termination in the rpsU-dnaG-rpoD macromolecular synthesis operon of E. coli K-12.
    Mol Gen Genet. 1984;195(3):391-401 PMID: 6206376
  51. Control of ColE1 plasmid replication: the process of binding of RNA I to the primer transcript.
    Cell. 1984 Oct;38(3):861-70 PMID: 6207934
  52. Control of ColE1 plasmid replication: enhancement of binding of RNA I to the primer transcript by the Rom protein.
    Cell. 1984 Oct;38(3):871-8 PMID: 6207935
  53. Ribonucleic acid isolated by cesium chloride centrifugation.
    Biochemistry. 1974 Jun 4;13(12):2633-7 PMID: 4831907
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1986-10-00
Pages
7381-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC386721
Subset
IM
Grants
PHS HHS · 7-1142-996 · United States
NIGMS NIH HHS · GM33278 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]