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PMID: 24872878 Published · epublish English Journal Article

The 3,000 rice genomes project: new opportunities and challenges for future rice research.

GigaScience ·Vol. 3 ·2014-00-00 ·Pages 8

Li JY, Wang J, Zeigler RS

Abstract

Rice is the world's most important staple grown by millions of small-holder farmers. Sustaining rice production relies on the intelligent use of rice diversity. The 3,000 Rice Genomes Project is a giga-dataset of publically available genome sequences (averaging 14× depth of coverage) derived from 3,000 accessions of rice with global representation of genetic and functional diversity. The seed of these accessions is available from the International Rice Genebank Collection. Together, they are an unprecedented resource for advancing rice science and breeding technology. Our immediate challenge now is to comprehensively and systematically mine this dataset to link genotypic variation to functional variation with the ultimate goal of creating new and sustainable rice varieties that can support a future world population that will approach 9.6 billion by 2050.

Keywords
Genetic resources Genome diversity Oryza sativa Phenomics Sequencing
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Li Jia-Yang
Chinese Academy of Agricultural Sciences, 12 S. Zhong-Guan-Cun St, Beijing 100081, China.
Wang Jun
BGI, Bei Shan Industrial Zone, Yantian District, Shenzhen 518083, China.
Zeigler Robert S
International Rice Research Institute, DAPO 7777, Metro Manila 1301, Philippines.
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Article Info
Journal
GigaScience
Abbr.
Gigascience
ISSN
2047-217X
Published
2014-00-00
Epub
2014-00-28
Pages
8
Language
English
Region
United States
NLM ID
101596872
PMCID
PMC4035671
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