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PMID: 2554308 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Cell proteins bind to multiple sites within the 5' untranslated region of poliovirus RNA.

del Angel RM, Papavassiliou AG, Fernández-Tomás C, Silverstein SJ, Racaniello VR

Abstract

The 5' noncoding region of poliovirus RNA contains sequences necessary for translation and replication. These functions are probably carried out by recognition of poliovirus RNA by cellular and/or viral proteins. Using a mobility-shift electrophoresis assay and 1,10-phenanthroline/Cu+ footprinting, we demonstrate specific binding of cytoplasmic factors with a sequence from nucleotides 510-629 within the 5' untranslated region (UTR). Complex formation was also observed with a second sequence (nucleotides 97-182) within the 5' UTR. These two regions of the 5' UTR appear to be recognized by distinct cell factors as determined by competition analysis and the effects of ionic strength on complex formation. However, both complexes contain eukaryotic initiation factor 2 alpha, as revealed by their reaction with specific antibody.

MeSH Terms
HeLa Cells/metabolism Humans Neoplasm Proteins/metabolism Nucleotide Mapping Poliovirus/genetics Protein Binding RNA, Viral/biosynthesis,metabolism Templates, Genetic
Chemicals
Neoplasm Proteins RNA, Viral
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
del Angel R M
Departmento de Genética y Biologia Molecular, Centro de Investigación y de Estudios Avanzados, Mexico City, Distrito Federal.
Papavassiliou A G
Fernández-Tomás C
Silverstein S J
Racaniello V R
References (22)
22 references, click to expand
  1. Mapping of sequences required for mouse neurovirulence of poliovirus type 2 Lansing.
    J Virol. 1986 Feb;57(2):515-25 PMID: 3003384
  2. New model for the secondary structure of the 5' non-coding RNA of poliovirus is supported by biochemical and genetic data that also show that RNA secondary structure is important in neurovirulence.
    J Mol Biol. 1989 May 20;207(2):379-92 PMID: 2547075
  3. Construction of viable deletion and insertion mutants of the Sabin strain of type 1 poliovirus: function of the 5' noncoding sequence in viral replication.
    J Virol. 1987 May;61(5):1478-87 PMID: 3033275
  4. Phosphorylation of eukaryotic initiation factor 2 during physiological stresses which affect protein synthesis.
    J Biol Chem. 1987 Oct 25;262(30):14538-43 PMID: 3667588
  5. Footprinting DNA-protein complexes in situ following gel retardation assays using 1,10-phenanthroline-copper ion: Escherichia coli RNA polymerase-lac promoter complexes.
    Biochemistry. 1987 Nov 17;26(23):7234-8 PMID: 3322397
  6. Cap-independent translation of poliovirus mRNA is conferred by sequence elements within the 5' noncoding region.
    Mol Cell Biol. 1988 Mar;8(3):1103-12 PMID: 2835660
  7. An RNA sequence of hundreds of nucleotides at the 5' end of poliovirus RNA is involved in allowing viral protein synthesis.
    J Virol. 1988 Jul;62(7):2291-9 PMID: 2836612
  8. Comparative sequence analysis of the 5' noncoding region of the enteroviruses and rhinoviruses.
    Virology. 1988 Jul;165(1):42-50 PMID: 2838971
  9. An internal 5'-noncoding region required for translation of poliovirus RNA in vitro.
    J Virol. 1988 Aug;62(8):3068-72 PMID: 2839722
  10. Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA.
    Nature. 1988 Jul 28;334(6180):320-5 PMID: 2839775
  11. Molecular events leading to picornavirus genome replication.
    J Cell Sci Suppl. 1987;7:251-76 PMID: 2846594
  12. Mutational analysis of upstream AUG codons of poliovirus RNA.
    J Virol. 1988 Dec;62(12):4486-92 PMID: 2846865
  13. Internal binding of eucaryotic ribosomes on poliovirus RNA: translation in HeLa cell extracts.
    J Virol. 1989 Jan;63(1):441-4 PMID: 2535747
  14. Determinants in the 5' noncoding region of poliovirus Sabin 1 RNA that influence the attenuation phenotype.
    J Virol. 1989 Mar;63(3):1302-9 PMID: 2536835
  15. Genetic basis of attenuation of the Sabin type 3 oral poliovirus vaccine.
    J Virol. 1989 Mar;63(3):1338-44 PMID: 2536836
  16. Mapping adenines, guanines, and pyrimidines in RNA.
    Nucleic Acids Res. 1977 Aug;4(8):2527-38 PMID: 409999
  17. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  18. Dependence of the activity of the poliovirus replicase on the host cell protein.
    Cell. 1980 Feb;19(2):423-9 PMID: 6244109
  19. Cleavage of deoxyribonucleic acid by the 1,10-phenanthroline-cuprous complex. Hydrogen peroxide requirement and primary and secondary structure specificity.
    Biochemistry. 1981 Jan 20;20(2):244-50 PMID: 7008837
  20. Conserved structural domains in the 5'-untranslated region of picornaviral genomes: an analysis of the segment controlling translation and neurovirulence.
    Virology. 1989 Feb;168(2):201-9 PMID: 2536978
  21. Mapping of attenuating sequences of an avirulent poliovirus type 2 strain.
    J Virol. 1989 May;63(5):1884-90 PMID: 2539491
  22. Poliovirus temperature-sensitive mutant containing a single nucleotide deletion in the 5'-noncoding region of the viral RNA.
    Virology. 1986 Dec;155(2):498-507 PMID: 3024397
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1989-11-00
Pages
8299-303
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC298268
Subset
IM
Grants
NIGMS NIH HHS · GM38125 · United States
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