Home LiteratureArticle Details
PMID: 3098169 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

DNA hybridization probe for the Pseudomonas fluorescens group.

Applied and environmental microbiology ·Vol. 52 ·No. 5 ·1986-11-00 ·Pages 1190-4

Festl H, Ludwig W, Schleifer KH

Abstract

Plasmid pHF360 was constructed from cloned rRNA genes (rDNA) of Pseudomonas aeruginosa and used as hybridization probe for the Pseudomonas fluorescens group. The probe was tested by dot and in situ colony hybridizations to chromosomal DNAs from a wide variety of organisms. pHF360 DNA hybridized exclusively to chromosomal DNAs from bacteria representing the P. fluorescens group and separated them clearly from all other bacteria tested in the present study. Determination of the nucleotide sequence of the cloned DNA showed that it is a fragment from a 23S rRNA gene of P. aeruginosa. It was compared with the published 23S RNA sequence from Escherichia coli.

MeSH Terms
Base Sequence Cloning, Molecular DNA, Bacterial DNA, Ribosomal Genes, Bacterial Nucleic Acid Hybridization Plasmids Pseudomonas aeruginosa/genetics Pseudomonas fluorescens/classification,genetics,isolation & purification RNA, Ribosomal/genetics Species Specificity
Chemicals
DNA, Bacterial DNA, Ribosomal RNA, Ribosomal
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Festl H
Ludwig W
Schleifer K H
References (18)
18 references, click to expand
  1. Characterization of saccharolytic nonfermentative bacteria associated with man.
    Can J Microbiol. 1970 May;16(5):351-62 PMID: 5419802
  2. A phylogenetic definition of the major eubacterial taxa.
    Syst Appl Microbiol. 1985;6:143-51 PMID: 11542017
  3. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  4. Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene.
    Proc Natl Acad Sci U S A. 1975 Oct;72(10):3961-5 PMID: 1105573
  5. Cellular fatty acids and metabolic products of Pseudomonas species obtained from clinical specimens.
    J Clin Microbiol. 1976 Dec;4(6):492-502 PMID: 1002828
  6. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  7. Determination of nucleic acid sequence homologies and relative concentrations by a dot hybridization procedure.
    Nucleic Acids Res. 1979 Nov 24;7(6):1541-52 PMID: 503860
  8. Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli.
    Proc Natl Acad Sci U S A. 1980 Jan;77(1):201-4 PMID: 6153795
  9. Molecular epidemiology of Vibrio cholerae in the U.S. Gulf Coast.
    J Clin Microbiol. 1982 Jul;16(1):129-34 PMID: 7107852
  10. A novel cloning vector for the direct selection of recombinant DNA in E. coli.
    Gene. 1982 Sep;19(2):231-4 PMID: 6293932
  11. Use of randomly cloned DNA fragments for identification of Bacteroides thetaiotaomicron.
    J Bacteriol. 1983 Apr;154(1):287-93 PMID: 6833179
  12. An improved positive selection plasmid vector constructed by oligonucleotide mediated mutagenesis.
    Nucleic Acids Res. 1983 Nov 25;11(22):8019-30 PMID: 6316281
  13. Complete nucleotide sequence of the 23S rRNA gene of the Cyanobacterium, Anacystis nidulans.
    Nucleic Acids Res. 1984 Apr 11;12(7):3373-86 PMID: 6326060
  14. Detection of mycoplasmas infecting cell cultures by DNA hybridization.
    In Vitro. 1984 May;20(5):404-8 PMID: 6724620
  15. Cloned mycoplasma ribosomal RNA genes for the detection of mycoplasma contamination in tissue cultures.
    Science. 1984 Dec 7;226(4679):1211-3 PMID: 6505688
  16. Complete nucleotide sequence of a 23S ribosomal RNA gene from Bacillus stearothermophilus.
    DNA. 1984 Oct;3(5):347-57 PMID: 6096097
  17. Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rrnB.
    Gene. 1985;37(1-3):261-6 PMID: 2414156
  18. Salient features of nonsaccharolytic and weakly saccharolytic nonfermentative rods.
    Can J Microbiol. 1970 Jun;16(6):401-9 PMID: 4192971
Article Info
Journal
Applied and environmental microbiology
Abbr.
Appl Environ Microbiol
ISSN
0099-2240
Published
1986-11-00
Pages
1190-4
Language
English
Region
United States
NLM ID
7605801
PMCID
PMC239196
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]