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PMID: 3464203 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Estimating the power of a proposed linkage study: a practical computer simulation approach.

American journal of human genetics ·Vol. 39 ·No. 4 ·1986-10-00 ·Pages 513-27

Boehnke M

Abstract

I describe a simulation method to estimate the power to detect linkage given a set of pedigrees of known structure and for which family history data may be available. This method can be applied to autosomal and X-linked dominant diseases; depending on the pedigrees under consideration, it will often be applicable for autosomal and X-linked recessive diseases. This power calculation can most usefully be undertaken after family history data are gathered, but prior to examination and testing of pedigree members to obtain marker information. Of key importance, the power calculation is straightforward to carry out and not too time-consuming; it is practical even on a microcomputer. The result of the power calculation is an objective answer to the question: Will my families be sufficient to demonstrate linkage?

MeSH Terms
Computer Simulation Genes, Dominant Genes, Recessive Genetic Linkage Genetic Markers Humans Lod Score Models, Genetic Pedigree X Chromosome
Chemicals
Genetic Markers
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Boehnke M
References (11)
11 references, click to expand
  1. Construction of a genetic linkage map in man using restriction fragment length polymorphisms.
    Am J Hum Genet. 1980 May;32(3):314-31 PMID: 6247908
  2. How many polymorphic genes will it take to span the human genome?
    Am J Hum Genet. 1982 Nov;34(6):842-5 PMID: 6960692
  3. Easy calculations of lod scores and genetic risks on small computers.
    Am J Hum Genet. 1984 Mar;36(2):460-5 PMID: 6585139
  4. The impact of RFLPs on human gene mapping.
    Prog Clin Biol Res. 1984;147:271-92 PMID: 6377315
  5. Sampling considerations in the design and analysis of family studies.
    Prog Clin Biol Res. 1984;147:349-71 PMID: 6377317
  6. A computer program for linkage analysis of general human pedigrees.
    Am J Hum Genet. 1976 Sep;28(5):528-9 PMID: 984049
  7. Sequential tests for the detection of linkage.
    Am J Hum Genet. 1955 Sep;7(3):277-318 PMID: 13258560
  8. The mapping of human chromosomes.
    Annu Rev Genet. 1971;5:81-120 PMID: 16097652
  9. Estimation of the recombination fraction in human pedigrees: efficient computation of the likelihood for human linkage studies.
    Am J Hum Genet. 1974 Sep;26(5):588-97 PMID: 4422075
  10. The prior probability of autosomal linkage.
    Ann Hum Genet. 1975 Jan;38(3):341-50 PMID: 1137348
  11. On the lod score method in linkage analysis.
    Ann Hum Genet. 1984 Oct;48(Pt 4):359-78 PMID: 6497351
Article Info
Journal
American journal of human genetics
Abbr.
Am J Hum Genet
ISSN
0002-9297
Published
1986-10-00
Pages
513-27
Language
English
Region
United States
NLM ID
0370475
PMCID
PMC1683992
Subset
IM
Grants
NCI NIH HHS · P01-CA-26803 · United States
NHLBI NIH HHS · R01-HL-24489 · United States
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