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PMID: 3881393 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Antisuppressor mutation in Escherichia coli defective in biosynthesis of 5-methylaminomethyl-2-thiouridine.

Journal of bacteriology ·Vol. 161 ·No. 1 ·1985-01-00 ·Pages 368-76

Sullivan MA, Cannon JF, Webb FH, Bock RM

Abstract

Mutations in three Escherichia coli K-12 genes were isolated that reduce the efficiency of the lysine-inserting nonsense suppressor supL. These antisuppressor mutations asuD, asuE, and asuF map at 61.9, 25.3, and 76.3 min, respectively, on the E. coli chromosome. Biochemical and genetic analysis of the mutant strains revealed the reason for the antisuppressor phenotype for two of these genes. The activity of lysyl-tRNA synthetase was reduced in strains with asuD mutations. The modification of 5-methylaminomethyl-2-thiouridine, the wobble base of tRNALys, was impaired in asuE mutant strains, presumably at the 2-thiolation step.

MeSH Terms
Chromosome Mapping Chromosomes, Bacterial Escherichia coli/genetics Lysine-tRNA Ligase/metabolism Plasmids RNA, Transfer, Amino Acyl/metabolism Suppression, Genetic Thiouridine/analogs & derivatives,genetics Transduction, Genetic
Chemicals
RNA, Transfer, Amino Acyl Thiouridine 5-methylaminomethyl-2-thiouridine Lysine-tRNA Ligase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Sullivan M A
Cannon J F
Webb F H
Bock R M
References (41)
41 references, click to expand
  1. Isolation and characterization of antisuppressor mutations in Escherichia coli.
    J Bacteriol. 1985 Jan;161(1):377-84 PMID: 3918006
  2. Compilation of tRNA sequences.
    Nucleic Acids Res. 1984;12 Suppl:r1-57 PMID: 6728685
  3. Codon--anticodon pairing: the wobble hypothesis.
    J Mol Biol. 1966 Aug;19(2):548-55 PMID: 5969078
  4. Mutants that make more lac repressor.
    Proc Natl Acad Sci U S A. 1968 Apr;59(4):1259-64 PMID: 4870861
  5. Specificity of yeast glutamic acid transfer RNA for codon recognition.
    Biochim Biophys Acta. 1969 Jun 17;182(2):411-26 PMID: 4894016
  6. Presumed anticodon structure of glutamic acid tRNA from E. coli: a possible location of a 2-thiouridine derivative in the first position of the anticodon.
    Biochem Biophys Res Commun. 1970 Aug 24;40(4):866-72 PMID: 4924671
  7. Possible anticodon sequences of tRNA His , tRNA Asm , and tRNA Asp from Escherichia coli B. Universal presence of nucleoside Q in the first postion of the anticondons of these transfer ribonucleic acids.
    Biochemistry. 1972 Jan 18;11(2):301-8 PMID: 4550561
  8. Base analysis of ribopolynucleotides by chemical tritium labeling: a methodological study with model nucleosides and purified tRNA species.
    Anal Biochem. 1972 Jul;48(1):172-98 PMID: 4339367
  9. Inorganic phosphate transport in Escherichia coli: involvement of two genes which play a role in alkaline phosphatase regulation.
    J Bacteriol. 1973 Feb;113(2):529-39 PMID: 4570598
  10. Biosynthesis of 5-methylaminomethyl-2-thiouridylate. I. Isolation of a new tRNA-methylase specific for 5-methylaminomethyl-2-thiouridylate.
    Biochem Biophys Res Commun. 1973 Apr 16;51(4):1062-8 PMID: 4703553
  11. Biological function of 2-thiouridine in Escherichia coli glutamic acid transfer ribonucleic acid.
    Biochemistry. 1973 Oct 23;12(22):4331-7 PMID: 4584321
  12. The psu1+ amber suppressor gene of bacteriophage T4: identification of its amino acid and transfer RNA.
    J Mol Biol. 1973 Dec 5;81(2):157-71 PMID: 4591185
  13. Genetic characterization of streptomycin-resistant and -dependent mutants of Escherichia coli K12.
    Mol Gen Genet. 1974 Apr 9;130(1):47-64 PMID: 4600675
  14. Nucleotide alterations in the bacteriophage T4 glutamine transfer RNA that affect ochre suppressor activity.
    J Mol Biol. 1974 Dec 25;90(4):677-89 PMID: 4375202
  15. Mapping of the fabD locus for fatty acid biosynthesis in Escherichia coli.
    J Bacteriol. 1975 Mar;121(3):1036-46 PMID: 1090584
  16. Isolation and partial characterization of three Escherichia coli mutants with altered transfer ribonucleic acid methylases.
    J Bacteriol. 1975 Apr;122(1):257-65 PMID: 1091626
  17. The nucleotide sequences of the two glutamine transfer ribonucleic acids from Escherichia coli.
    J Biol Chem. 1975 May 10;250(9):3243-53 PMID: 164464
  18. A mutation of the wobble nucleotide of a bacteriophage T4 transfer RNA.
    J Mol Biol. 1975 Dec 5;99(2):283-93 PMID: 1206705
  19. A modified uridine in the anticodon of E. coli tRNA I Tyr su + oc.
    Nucleic Acids Res. 1976 Feb;3(2):441-8 PMID: 768924
  20. Role of modified nucleosides in tRNA: effect of modification of the 2-thiouridine derivative located at the 5'-end of the anticodon of yeast transfer RNA Lys2.
    Nucleic Acids Res. 1976 Mar;3(3):523-35 PMID: 775440
  21. Chromosomal location of gene governing the trehalose utilization in Escherichia coli K12.
    Mol Gen Genet. 1977 Mar 28;152(1):105-8 PMID: 325381
  22. A functional requirement for modification of the wobble nucleotide in tha anticodon of a T4 suppressor tRNA.
    Cell. 1976 Nov;9(3):449-63 PMID: 791507
  23. A colony bank containing synthetic Col El hybrid plasmids representative of the entire E. coli genome.
    Cell. 1976 Sep;9(1):91-9 PMID: 788919
  24. Two modes of metabolic regulation of lysyl-transfer ribonucleic acid synthetase in Escherichia coli K-12.
    J Bacteriol. 1977 Aug;131(2):589-97 PMID: 328487
  25. U-G-A suppressor of bacteriophage T4 associated with arginine transfer RNA.
    J Biol Chem. 1977 Nov 25;252(22):8254-7 PMID: 914869
  26. Regulation of biosynthesis of aminoacyl-tRNA synthetases and of tRNA in Escherichia coli. I. Isolation and characterization of a mutant with elevated levels of tRNAGln 1.
    J Mol Biol. 1977 Dec 25;117(4):1013-31 PMID: 24122
  27. Regulation of biosynthesis of aminoacyl-tRNA synthetases and of tRNA in Escherichia coli. II. Isolation of regulatory mutants affecting leucyl-tRNA synthetase levels.
    J Mol Biol. 1977 Dec 25;117(4):1033-48 PMID: 342703
  28. Primary structure of tRNA-Lys of E. coli B.
    Nucleic Acids Res. 1975 Nov;2(11):2069-75 PMID: 802509
  29. Regulation of the biosynthesis of aminoacid: tRNA ligases and of tRNA.
    Prog Nucleic Acid Res Mol Biol. 1978;21:181-207 PMID: 358278
  30. Genetic studies of the lac repressor. IX. Generation of altered proteins by the suppression of nonsence mutations.
    J Mol Biol. 1979 Jun 25;131(2):191-222 PMID: 385890
  31. A restriction enzyme cleavage map of Tn5 and location of a region encoding neomycin resistance.
    Mol Gen Genet. 1979;177(1):65-72 PMID: 231729
  32. Polarity of Tn5 insertion mutations in Escherichia coli.
    J Bacteriol. 1980 May;142(2):439-46 PMID: 6247321
  33. The influence of codon context on genetic code translation.
    Nature. 1980 Jul 10;286(5769):123-7 PMID: 7402305
  34. Identification of a novel genetic element in Escherichia coli K-12.
    J Bacteriol. 1980 Oct;144(1):312-21 PMID: 6998954
  35. Multiple forms of lysyl-transfer ribonucleic acid synthetase in Escherichia coli.
    J Bacteriol. 1981 Apr;146(1):345-51 PMID: 7012120
  36. 5-(carboxymethylaminomethyl)-2-thiouridine, a new modified nucleoside found at the first letter position of the anticodon.
    Nucleic Acids Res. 1981 Apr 24;9(8):1933-9 PMID: 7017599
  37. Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes.
    Gene. 1982 Jun;18(3):199-209 PMID: 6751939
  38. Gene for heat-inducible lysyl-tRNA synthetase (lysU) maps near cadA in Escherichia coli.
    J Bacteriol. 1983 Feb;153(2):1066-8 PMID: 6337114
  39. Effects of surrounding sequence on the suppression of nonsense codons.
    J Mol Biol. 1983 Feb 15;164(1):59-71 PMID: 6188840
  40. Linkage map of Escherichia coli K-12, edition 7.
    Microbiol Rev. 1983 Jun;47(2):180-230 PMID: 6348505
  41. A model for three-point analysis of random general transduction.
    Genetics. 1966 Aug;54(2):405-10 PMID: 5338813
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1985-01-00
Pages
368-76
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC214881
Subset
IM
Grants
NIGMS NIH HHS · GM 07215 · United States
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