Abstract
We reported that several DNA sequences homologous to mitochondrial DNA (mtDNA) are present in the human nuclear genome (Tsuzuki et al. (1983) Gene 25, 223-229). Detailed Southern blot analyses revealed that one of such sequences is interrupted by a repetitive sequence about 1.8 kb long, and that the insert is one member of the dispersed repeated DNA sequences of the KpnI 1.8 kb family. Nucleotide sequence analysis showed that the KpnI 1.8 kb DNA is flanked with imperfect 15-base pair (bp) direct repeats of mtDNA. This KpnI 1.8 kb DNA has an A-rich sequence at its 3'-end, and has a considerable homology with one of the published cDNA sequences homologous to one of the human KpnI families and also to one of the African green monkey KpnI families, KpnI-LS1. These structural features suggest that the KpnI 1.8 kb DNA is a movable element and is inserted within the mtDNA-like sequence by an RNA-mediated process.
MeSH Terms
Animals
Base Composition
Base Sequence
Cell Nucleus/metabolism
Chlorocebus aethiops
DNA/analysis,genetics
DNA Restriction Enzymes/metabolism
DNA, Mitochondrial/genetics
Deoxyribonucleases, Type II Site-Specific
Escherichia coli/genetics
Genes
Humans
Nucleic Acid Hybridization
Plasmids
Species Specificity
Chemicals
DNA, Mitochondrial
DNA
DNA Restriction Enzymes
Deoxyribonucleases, Type II Site-Specific
GGTACC-specific type II deoxyribonucleases
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Nomiyama H
Tsuzuki T
Wakasugi S
Fukuda M
Shimada K
References (27)
27 references, click to expand
-
A general method for isolation of high molecular weight DNA from eukaryotes.
Nucleic Acids Res. 1976 Sep;3(9):2303-8
PMID: 987581
-
Rearranged sequences of a human Kpn I element.
Proc Natl Acad Sci U S A. 1984 Feb;81(4):1012-6
PMID: 6322182
-
Sequencing end-labeled DNA with base-specific chemical cleavages.
Methods Enzymol. 1980;65(1):499-560
PMID: 6246368
-
The evolution of genes: the chicken preproinsulin gene.
Cell. 1980 Jun;20(2):555-66
PMID: 7388949
-
Cloning of human mitochondrial DNA in Escherichia coli.
J Mol Biol. 1980 Jun 15;140(1):15-34
PMID: 6251232
-
The bidirectional transfer of DNA and RNA to nitrocellulose or diazobenzyloxymethyl-paper.
Anal Biochem. 1980 Nov 15;109(1):123-9
PMID: 6162401
-
Sequence and organization of the human mitochondrial genome.
Nature. 1981 Apr 9;290(5806):457-65
PMID: 7219534
-
Direct repeats flank three small nuclear RNA pseudogenes in the human genome.
Cell. 1981 Oct;26(1 Pt 1):11-7
PMID: 6173130
-
Short interspersed repetitive DNA elements in eucaryotes: transposable DNA elements generated by reverse transcription of RNA pol III transcripts?
Cell. 1981 Oct;26(2 Pt 2):141-2
PMID: 6277493
-
KpnI families of long, interspersed repetitive DNAs in human and other primate genomes.
Nucleic Acids Res. 1982 May 25;10(10):3175-93
PMID: 6285290
-
Repetitive sequences in eukaryotic DNA and their expression.
Annu Rev Biochem. 1982;51:813-44
PMID: 7051966
-
Rearranged mitochondrial genes in the yeast nuclear genome.
Nature. 1983 Jan 27;301(5898):296-301
PMID: 6296698
-
Mitochondrial DNA sequences in the nuclear genome of a locust.
Nature. 1983 Feb 17-23;301(5901):631-4
PMID: 6298629
-
Integration of mitochondrial gene sequences within the nuclear genome during senescence in a fungus.
Nature. 1983 Mar 3;302(5903):86-8
PMID: 6828161
-
KpnI families of long, interspersed repetitive DNAs associated with the human beta-globin gene cluster.
Gene. 1982 Dec;20(3):397-407
PMID: 6299899
-
Mitochondrial DNA sequences in the nuclear genome of Strongylocentrotus purpuratus.
J Mol Biol. 1983 Apr 25;165(4):609-32
PMID: 6687903
-
Transcription of the KpnI families of long interspersed DNAs in human cells.
Nature. 1983 Jul 21-27;304(5923):277-80
PMID: 6306481
-
Kpn I family of long interspersed repeated DNA sequences in primates: polymorphism of family members and evidence for transcription.
Proc Natl Acad Sci U S A. 1983 Jul;80(13):3966-70
PMID: 6306655
-
The majority of cDNA clones with strong positive signals for the interferon-induction-specific sequences resemble mitochondrial ribosomal RNA genes.
Biochem Biophys Res Commun. 1983 Jul 29;114(2):670-6
PMID: 6192820
-
Some KpnI family members are associated with the Alu family in the human genome.
Nucleic Acids Res. 1983 Oct 11;11(19):6837-46
PMID: 6314260
-
Mitochondrial DNA and nuclear DNA from normal rat liver have a common sequence.
Proc Natl Acad Sci U S A. 1983 Nov;80(21):6495-9
PMID: 6579536
-
Kpn I family of long-dispersed repeated DNA sequences of man: evidence for entry into genomic DNA of DNA copies of poly(A)-terminated Kpn I RNAs.
Proc Natl Acad Sci U S A. 1983 Nov;80(21):6533-7
PMID: 6195659
-
Two-dimensional gel electrophoretic analysis of the HindIII 1.8-kb repetitive-sequence family in the human genome.
Gene. 1983 Oct;24(2-3):179-90
PMID: 6315535
-
Presence of mitochondrial-DNA-like sequences in the human nuclear DNA.
Gene. 1983 Nov;25(2-3):223-9
PMID: 6662364
-
Transcripts homologous to a long repeated DNA element in the human genome.
J Biol Chem. 1984 Jan 25;259(2):1218-25
PMID: 6198321
-
GENAS: a database system for nucleic acid sequence analysis.
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):89-99
PMID: 6694905
-
Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
J Mol Biol. 1977 Jun 15;113(1):237-51
PMID: 881736