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PMID: 6253897 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Cleavage of DNA.RNA hybrids by type II restriction enzymes.

Nucleic acids research ·Vol. 8 ·No. 13 ·1980-07-11 ·Pages 2939-46

Molloy PL, Symons RH

Abstract

The action of a number of restriction enzymes on DNA.RNA hybrids has been examined using hybrids synthesised with RNAs of cucumber mosaic virus as templates. The enzymes EcoRI, HindII, SalI, MspI, HhaI, AluI, TaqI and HaeIII cleaved the DNA strand of the hybrids (and possible also the RNA strand) into specific fragments. For four of these enzymes, HhaI, AluI, TaqI and HaeIII, comparison of the restriction fragments produced with the known sequences of the viral RNAs confirmed that they were recognising and cleaving the DNA strand of the hybrids at their correct recognition sequences. It is likely that the ability to utilise DNA.RNA hybrids as substrates is a general property of Type II restriction enzymes.

MeSH Terms
DNA Restriction Enzymes/metabolism DNA, Viral Molecular Weight Mosaic Viruses/analysis Nucleic Acid Hybridization RNA, Viral
Chemicals
DNA, Viral RNA, Viral DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Molloy P L
Symons R H
References (20)
20 references, click to expand
  1. Purification and further properties of single-strand-specific nuclease from Aspergillus oryzae.
    Eur J Biochem. 1973 Feb 15;33(1):192-200 PMID: 4691350
  2. Restriction endonucleases in the analysis and restructuring of dna molecules.
    Annu Rev Biochem. 1975;44:273-93 PMID: 166604
  3. 'Single-stranded' DNA from phiX174 and M13 is cleaved by certain restriction endonucleases.
    Nature. 1975 Oct 2;257(5525):421-2 PMID: 809717
  4. Site-specific cleavage of single-stranded DNA by a Hemophilus restriction endonuclease.
    Proc Natl Acad Sci U S A. 1975 Jul;72(7):2555-8 PMID: 1058473
  5. Synthesis of extensive, possibly complete, DNA copies of poliovirus RNA in high yields and at high specific activities.
    Proc Natl Acad Sci U S A. 1976 Jul;73(7):2191-5 PMID: 59925
  6. dna, single stranded/*metab.
    Virology. 1976 Sep;73(2):561-7 PMID: 960577
  7. Restriction endonucleases.
    CRC Crit Rev Biochem. 1976 Nov;4(2):123-64 PMID: 795607
  8. Nucleotide sequence of part of the gene for human chorionic somatomammotropin: purification of DNA complementary to predominant mRNA species.
    Cell. 1977 Sep;12(1):157-65 PMID: 71212
  9. Duplex regions in "single-stranded" phiX174 DNA are cleaved by a restriction endonuclease from Haemophilus aegyptius.
    J Biol Chem. 1977 Oct 25;252(20):7300-6 PMID: 71298
  10. Enhanced autoradiographic detection of 32P and 125I using intensifying screens and hypersensitized film.
    FEBS Lett. 1977 Oct 15;82(2):314-6 PMID: 913604
  11. Determination of the sequence homology between the four RNA species of cucumber mosaic virus by hybridization analysis with complementary DNA.
    Nucleic Acids Res. 1977 Nov;4(11):3787-802 PMID: 593886
  12. The rapid, simple and improved preparation of high specific activity alpha-[32P]dATP and alpha-[32P]ATP.
    Nucleic Acids Res. 1977 Dec;4(12):4347-55 PMID: 600797
  13. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  14. Characterization of a satellite RNA associated with cucumber mosaic virus.
    Virology. 1978 Feb;84(2):443-55 PMID: 622808
  15. The use of thin acrylamide gels for DNA sequencing.
    FEBS Lett. 1978 Mar 1;87(1):107-10 PMID: 631324
  16. 3'-terminal nucleotide sequence of encephalomyocarditis virus RNA determined by reverse transcriptase and chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1978 Sep;75(9):4257-61 PMID: 81487
  17. Sodium pyrophosphate inhibition of RNA.DNA hybrid degradation by reverse transcriptase.
    Proc Natl Acad Sci U S A. 1978 Nov;75(11):5329-33 PMID: 82966
  18. Complete sequence of constant and 3' noncoding regions of an immunoglobulin mRNA using the dideoxynucleotide method of RNA sequencing.
    Cell. 1978 Nov;15(3):1067-75 PMID: 103625
  19. A DNA sequence cleaved by restriction endonuclease R.EcoRI in only one strand.
    J Mol Biol. 1979 Mar 15;128(4):545-9 PMID: 374743
  20. Extensive sequence homology at the 3'-termini of the four RNAs of cucumber mosaic virus.
    Nucleic Acids Res. 1979 Oct 25;7(4):825-37 PMID: 92011
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1980-07-11
Pages
2939-46
Language
English
Region
England
NLM ID
0411011
PMCID
PMC324136
Subset
IM
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