Home LiteratureArticle Details
PMID: 6269086 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

DNA gyrase: affinity chromatography on novobiocin-Sepharose and catalytic properties.

Nucleic acids research ·Vol. 9 ·No. 15 ·1981-08-11 ·Pages 3589-603

Staudenbauer WL, Orr E

Abstract

Novobiocin-Sepharose was prepared by coupling of novobiocin to Epoxy-activated Sepharose 6B and used as an affinity adsorbent. Four novobiocin-binding proteins were isolated from crude extracts of Escherichia coli with molecular weights of 105, 92, 85 and 40 kdal. The two larger proteins were identified as the A subunit (gyrA protein) and the B subunit (gyrB protein) of DNA gyrase topoisomerase II). By this method the two gyrase components can be easily separated and purified in high yield. Although both proteins are involved in the ATP-dependent supercoiling of relaxed plasmid DNA, only the gyrB protein is required for catalyzing the cleavage of ATP. The gyrB protein ATPase activity is competitively inhibited by novobiocin and related coumarin antibiotics. ATP hydrolysis is unaffected by the addition of either gyrA protein or DNA but stimulated in the presence of both.

MeSH Terms
Adenosine Triphosphatases/metabolism Chromatography, Affinity/methods DNA Topoisomerases, Type II/isolation & purification,metabolism Escherichia coli/enzymology Genetic Complementation Test Kinetics Novobiocin Sepharose
Chemicals
Novobiocin Sepharose Adenosine Triphosphatases DNA Topoisomerases, Type II
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Staudenbauer W L
Orr E
References (23)
23 references, click to expand
  1. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  2. Structure-activity relationships in coumermycins.
    Adv Appl Microbiol. 1972;15:231-96 PMID: 4593293
  3. dnaG gene product, a rifampicin-resistant RNA polymerase, initiates the conversion of a single-stranded coliphage DNA to its duplex replicative form.
    J Biol Chem. 1975 Aug 10;250(15):5995-6001 PMID: 1097446
  4. Letters to the editor: Novobiocin-a specific inhibitor of semiconservative DNA replication in permeabilized Escherichia coli cells.
    J Mol Biol. 1975 Jul 25;96(1):201-5 PMID: 1099213
  5. Coumermycin A1: A preferential inhibitor of replicative DNA synthesis in Escherichia coli. I. In vivo characterization.
    Biochemistry. 1976 AUG 24;15(17):3769-77 PMID: 782522
  6. DNA gyrase: an enzyme that introduces superhelical turns into DNA.
    Proc Natl Acad Sci U S A. 1976 Nov;73(11):3872-6 PMID: 186775
  7. Novobiocin and coumermycin inhibit DNA supercoiling catalyzed by DNA gyrase.
    Proc Natl Acad Sci U S A. 1976 Dec;73(12):4474-8 PMID: 794878
  8. Interaction between DNA and Escherichia coli protein omega. Formation of a complex between single-stranded DNA and omega protein.
    J Biol Chem. 1978 Jan 25;253(2):511-8 PMID: 338610
  9. Purification of subunits of Escherichia coli DNA gyrase and reconstitution of enzymatic activity.
    Proc Natl Acad Sci U S A. 1978 Apr;75(4):1773-7 PMID: 347446
  10. Refinement of the coomassie blue method of protein quantitation. A simple and linear spectrophotometric assay for less than or equal to 0.5 to 50 microgram of protein.
    Anal Biochem. 1978 May;86(1):142-6 PMID: 655375
  11. DNA gyrase: subunit structure and ATPase activity of the purified enzyme.
    Proc Natl Acad Sci U S A. 1978 Dec;75(12):5960-3 PMID: 153529
  12. Energy coupling in DNA gyrase and the mechanism of action of novobiocin.
    Proc Natl Acad Sci U S A. 1978 Oct;75(10):4838-42 PMID: 368801
  13. A topoisomerase from Escherichia coli related to DNA gyrase.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6110-4 PMID: 230498
  14. DNA gyrase: purification and catalytic properties of a fragment of gyrase B protein.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6289-93 PMID: 230505
  15. DNA gyrase and the supercoiling of DNA.
    Science. 1980 Feb 29;207(4434):953-60 PMID: 6243420
  16. Isolation and characterisation of a strain carrying a conditional lethal mutation in the cou gene of Escherichia coli K12.
    Mol Gen Genet. 1979;177(1):103-12 PMID: 94144
  17. An improved assay for nanomole amounts of inorganic phosphate.
    Anal Biochem. 1979 Nov 15;100(1):95-7 PMID: 161695
  18. Inhibition of deoxyribonucleic acid gyrase: effects on nucleic acid synthesis and cell division in Escherichia coli K-12.
    J Bacteriol. 1980 Apr;142(1):153-61 PMID: 6154685
  19. DNA gyrase subunit stoichiometry and the covalent attachment of subunit A to DNA during DNA cleavage.
    Nucleic Acids Res. 1980 Sep 11;8(17):3865-74 PMID: 6255421
  20. Deoxyribonucleic acid gyrase-deoxyribonucleic acid complex containing 140 base pairs of deoxyribonucleic acid and an alpha 2 beta 2 protein core.
    Biochemistry. 1980 Nov 11;19(23):5229-34 PMID: 6255987
  21. An Escherichia coli mutant thermosensitive in the B subunit of DNA gyrase: effect on the structure and replication of the colicin E1 plasmid in vitro.
    Mol Gen Genet. 1981;181(1):52-6 PMID: 6261085
  22. The determination of enzyme inhibitor constants.
    Biochem J. 1953 Aug;55(1):170-1 PMID: 13093635
  23. A method for determining the sedimentation behavior of enzymes: application to protein mixtures.
    J Biol Chem. 1961 May;236:1372-9 PMID: 13767412
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1981-08-11
Pages
3589-603
Language
English
Region
England
NLM ID
0411011
PMCID
PMC327377
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]