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PMID: 6292856 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

The structure of the gene coding for the phosphorylated ribosomal protein S10 in yeast.

Nucleic acids research ·Vol. 10 ·No. 19 ·1982-10-11 ·Pages 5869-78

Leer RJ, van Raamsdonk-Duin MM, Molenaar CM, Cohen LH, Mager WH, Planta RJ

Abstract

From previous studies on cloned yeast ribosomal protein genes we obtained evidence that a large number of them contain an intron [Bollen et al. (1982) Gene 18, 29-38]. In the temperature-sensitive rna2-mutant transcription of these genes leads to the accumulation of precursor RNAs at the restrictive temperature. These precursor mRNAs are several hundreds of nucleotides longer than the respective mature mRNAs. The split character of one of these ribosomal protein genes, viz. the gene coding for the major phosphorylated small-subunit protein S10, was further established by sequence analysis. The intervening sequence interrupts the coding sequence after the second codon and has a length of 352 nucleotides. Genomic Southern hybridizations with a DNA fragment carrying part of the S10-gene revealed that this gene is duplicated on the yeast genome. The molecular weight of S10 as deduced from the sequence analysis was estimated to be 31462 dal. Comparison of the N-terminal aminoacid sequence of the yeast ribosomal protein S10 with that of ribosomal protein S6 from rat liver revealed a striking homology between both proteins. Moreover, at the C-terminal end of the yeast ribosomal protein the sequence Arg-Ala-Ser-Ser-Leu-Lys is present which is very similar to the phosphorylation site of the rat liver protein S6.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Cloning, Molecular DNA Restriction Enzymes DNA Transposable Elements Genes Liver/analysis Mutation Nucleic Acid Hybridization Rats Ribosomal Proteins/genetics Saccharomyces cerevisiae/genetics Temperature Transcription, Genetic
Chemicals
DNA Transposable Elements Ribosomal Proteins ribosomal protein S10 DNA Restriction Enzymes
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Leer R J
van Raamsdonk-Duin M M
Molenaar C M
Cohen L H
Mager W H
Planta R J
References (31)
31 references, click to expand
  1. Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.
    Proc Natl Acad Sci U S A. 1969 Apr;62(4):1159-66 PMID: 4894690
  2. Identification of ten genes that control ribosome formation in yeast.
    Mol Gen Genet. 1970;109(1):42-56 PMID: 5488085
  3. Nuclear satellite DNAs of yeast.
    Biochim Biophys Acta. 1972 Oct 27;281(3):299-309 PMID: 4639276
  4. The ribosomal proteins of Saccharomyces cerevisiae. Phosphorylated and exchangeable proteins.
    J Biol Chem. 1976 Mar 25;251(6):1799-807 PMID: 767341
  5. Coordinate regulation of the synthesis of eukaryotic ribosomal proteins.
    Proc Natl Acad Sci U S A. 1976 May;73(5):1547-51 PMID: 775493
  6. A simple method for DNA restriction site mapping.
    Nucleic Acids Res. 1976 Sep;3(9):2387-98 PMID: 787937
  7. Phosphorylation in vitro and in vivo of ribosomal proteins from Saccharomyces cerevisia.
    Eur J Biochem. 1977 Jan 3;72(1):167-74 PMID: 318998
  8. A new method for sequencing DNA.
    Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4 PMID: 265521
  9. The synthesis of eucaryotic ribosomal proteins in vitro.
    Cell. 1977 May;11(1):201-12 PMID: 326416
  10. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  11. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  12. The ribosomal proteins of Saccharomyces cerevisiae.
    Methods Cell Biol. 1978;20:45-60 PMID: 357926
  13. Modification of yeast ribosomal proteins. Phosphorylation.
    Biochem J. 1978 Oct 1;175(1):213-9 PMID: 367365
  14. Quantitative analysis of specific labelled RNA'S using DNA covalently linked to diazobenzyloxymethyl-paper.
    Nucleic Acids Res. 1979 Jan;6(1):195-203 PMID: 218170
  15. Proposed uniform nomenclature for mammalian ribosomal proteins.
    Mol Gen Genet. 1979 Jan 16;169(1):1-6 PMID: 286144
  16. Phosphorylation of a specific ribosomal protein during stimulation of thymocytes by concanavalin A and prostaglandin E1.
    J Biol Chem. 1979 Sep 25;254(18):9317-23 PMID: 225326
  17. Acidic ribosomal proteins from eukaryotic cells. Effect on ribosomal functions.
    Eur J Biochem. 1979 Aug 1;98(2):409-16 PMID: 114391
  18. Are snRNPs involved in splicing?
    Nature. 1980 Jan 10;283(5743):220-4 PMID: 7350545
  19. Small-size mRNAs code for ribosomal proteins in yeast.
    Eur J Biochem. 1980 Mar;105(1):75-80 PMID: 6989605
  20. Sequence of the amino-terminal region of rat liver ribosomal proteins S4, S6, S8, L6, L7a, L18, L27, L30, L37, L37a, and L39.
    J Supramol Struct. 1979;12(4):425-33 PMID: 398910
  21. Isolation and sequence of the gene for actin in Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3912-6 PMID: 7001447
  22. A system for shotgun DNA sequencing.
    Nucleic Acids Res. 1981 Jan 24;9(2):309-21 PMID: 6259625
  23. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.
    J Mol Biol. 1980 Oct 25;143(2):161-78 PMID: 6260957
  24. The effect of temperature-sensitive RNA mutants on the transcription products from cloned ribosomal protein genes of yeast.
    Cell. 1981 Jun;24(3):679-86 PMID: 7018694
  25. The genes for fifteen ribosomal proteins of Saccharomyces cerevisiae.
    J Biol Chem. 1981 Oct 10;256(19):10176-83 PMID: 6268628
  26. Isolation of cloned ribosomal protein genes from the yeast Saccharomyces carlsbergensis.
    Gene. 1981 Sep;14(4):279-87 PMID: 6170538
  27. The acidic proteins of eukaryotic ribosomes. A comparative study.
    Biochim Biophys Acta. 1981 Nov 27;656(1):28-35 PMID: 6796122
  28. High resolution mini-two-dimensional gel electrophoresis of yeast ribosomal proteins. A standard nomenclature for yeast ribosomal proteins.
    Mol Biol Rep. 1981 Nov 30;8(1):37-44 PMID: 7329415
  29. Ribosomal protein S6 from Xenopus laevis ovaries. Isolation, phosphorylation in vivo and cross-reaction with heterologous anti-S6 antibodies.
    Eur J Biochem. 1982 Mar 1;122(3):439-43 PMID: 7060584
  30. Codon selection in yeast.
    J Biol Chem. 1982 Mar 25;257(6):3026-31 PMID: 7037777
  31. Isolation and characterisation of cyclic AMP-dependent phosphorylation sites from rat liver ribosomal protein S6.
    FEBS Lett. 1982 Apr 19;140(2):263-9 PMID: 6282641
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1982-10-11
Pages
5869-78
Language
English
Region
England
NLM ID
0411011
PMCID
PMC320936
Subset
IM
Databases
GENBANK
J01350
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