Home LiteratureArticle Details
PMID: 6377013 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Nucleotide sequence and functional properties of DNA encoding incompatibility in the broad host-range plasmid R1162.

Molecular & general genetics : MGG ·Vol. 194 ·No. 3 ·1984-00-00 ·Pages 423-31

Lin LS, Meyer RJ

Abstract

A 370 base pair (bp) fragment of R1162 DNA encoding the incompatibility determinant has been cloned and sequenced. The DNA is located between 6.1 and 6.5 on the R1162 map, near the origin of replication. The sequence contains three perfectly conserved 20 bp direct repeats, with 11 bp of this sequence repeated a fourth time. The direct repeat unit shows some homology with that of another, unrelated broad host-range plasmid, RK2. The cloned DNA has two other properties: it lowers the copy number of R1162 when cloned into this plasmid, and it is required in cis for replication of R1162 satellite plasmids.

MeSH Terms
Base Sequence DNA, Bacterial/genetics Escherichia coli/genetics Plasmids Repetitive Sequences, Nucleic Acid
Chemicals
DNA, Bacterial
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Lin L S
Meyer R J
References (32)
32 references, click to expand
  1. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  2. Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA.
    Cell. 1983 Aug;34(1):125-34 PMID: 6224568
  3. Nine unique repeating sequences in a region essential for replication and incompatibility of the mini-F plasmid.
    Gene. 1981 Nov;15(2-3):257-71 PMID: 7028572
  4. Replication and incompatibility properties of segments of the origin region of replication of the broad host range plasmid RK2.
    Mol Gen Genet. 1981;181(1):1-7 PMID: 6261080
  5. Nucleotide sequence of the region of an origin of replication of the antibiotic resistance plasmid R6K.
    Proc Natl Acad Sci U S A. 1979 Mar;76(3):1150-4 PMID: 375227
  6. Plasmid R6K DNA replication. II. Direct nucleotide sequence repeats are required for an active gamma-origin.
    J Mol Biol. 1982 Oct 15;161(1):45-56 PMID: 6296394
  7. Construction of a novel plasmid-phage hybrid: use of the hybrid to demonstrate ColE1 DNA replication in vivo in the absence of a ColE1-specified protein.
    Proc Natl Acad Sci U S A. 1978 May;75(5):2200-4 PMID: 276860
  8. The nucleotide sequence of replication and maintenance functions encoded by plasmid pSC101.
    Nucleic Acids Res. 1983 Aug 25;11(16):5645-59 PMID: 6310509
  9. Replication properties of plasmic R6K.
    Plasmid. 1981 Jan;5(1):2-9 PMID: 6261282
  10. A system for shotgun DNA sequencing.
    Nucleic Acids Res. 1981 Jan 24;9(2):309-21 PMID: 6259625
  11. Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.
    Proc Natl Acad Sci U S A. 1972 Aug;69(8):2110-4 PMID: 4559594
  12. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
    Gene. 1982 Oct;19(3):269-76 PMID: 6295880
  13. A rapid boiling method for the preparation of bacterial plasmids.
    Anal Biochem. 1981 Jun;114(1):193-7 PMID: 6269464
  14. Inhibition of ColE1 RNA primer formation by a plasmid-specified small RNA.
    Proc Natl Acad Sci U S A. 1981 Mar;78(3):1421-5 PMID: 6165011
  15. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  16. Nucleotide sequence of the region of the origin of replication of the broad host range plasmid RK2.
    Mol Gen Genet. 1981;181(1):8-12 PMID: 6261086
  17. Comparison of the deoxyribonucleic acid molecular weights and homologies of plasmids conferring linked resistance to streptomycin and sulfonamides.
    J Bacteriol. 1974 Nov;120(2):618-30 PMID: 4616941
  18. Method for the isolation of the replication region of a bacterial replicon: construction of a mini-F'kn plasmid.
    J Bacteriol. 1976 Aug;127(2):982-7 PMID: 783124
  19. Nucleotide sequence of an incompatibility region of mini-Rts1 that contains five direct repeats.
    J Bacteriol. 1983 Sep;155(3):1185-91 PMID: 6309744
  20. A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
    Nucleic Acids Res. 1979 Nov 24;7(6):1513-23 PMID: 388356
  21. Properties of R1162, a broad-host-range, high-copy-number plasmid.
    J Bacteriol. 1982 May;150(2):552-62 PMID: 6279561
  22. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.
    Gene. 1977;2(2):95-113 PMID: 344137
  23. Direct repeats of the F plasmid incC region express F incompatibility.
    Cell. 1981 Jun;24(3):687-94 PMID: 7018695
  24. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.
    J Bacteriol. 1978 Jun;134(3):1141-56 PMID: 149110
  25. The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.
    Proc Natl Acad Sci U S A. 1974 Apr;71(4):1342-6 PMID: 4598299
  26. Role of nine repeating sequences of the mini-F genome for expression of F-specific incompatibility phenotype and copy number control.
    J Bacteriol. 1983 Jul;155(1):337-44 PMID: 6305917
  27. RNAs involved in copy-number control and incompatibility of plasmid R1.
    Proc Natl Acad Sci U S A. 1981 Oct;78(10):6008-12 PMID: 6171808
  28. Trimethoprim R factors in enterobacteria from clinical specimens.
    J Med Microbiol. 1974 May;7(2):169-77 PMID: 4599661
  29. Plasmid R6K DNA replication. III. Regulatory properties of the pi initiation protein.
    J Mol Biol. 1982 Oct 15;161(1):57-76 PMID: 6818353
  30. A procedure for the large-scale isolation of highly purified plasmid DNA using alkaline extraction and binding to glass powder.
    Anal Biochem. 1982 Apr;121(2):382-7 PMID: 6179438
  31. Plasmid ColEl as a molecular vehicle for cloning and amplification of DNA.
    Proc Natl Acad Sci U S A. 1974 Sep;71(9):3455-9 PMID: 4610576
  32. Genetic organization of the broad-host-range IncP-1 plasmid R751.
    J Bacteriol. 1980 Sep;143(3):1362-73 PMID: 6251029
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1984-00-00
Pages
423-31
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Databases
GENBANK
X00537
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]