Home LiteratureArticle Details
PMID: 6447874 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Replication of duplex DNA of phage phi X174 reconstituted with purified enzymes.

Arai K, Arai N, Shlomai J, Kornberg A

Abstract

Replication of the covalently closed duplex replicative form (RF) of phage phi X174 DNA has been achieved by coupling two known enzyme systems: (i) synthesis of viral strand circles (SS) from RF, and (ii) conversion of SS to nearly complete RF (RF II). In this coupled system, activated RF (gene A . RF II complex) was a more efficient template and generated as many as 10 RF II molecules per RF input, at a rate commensurate with SS synthesis. The 11 proteins required for the two component systems were all needed in the coupled RF duplication system; no new factors were required. Single-stranded DNA binding protein was needed for RF duplication at only 4% the level needed in its stoichiometric participation in SS synthesis. In addition to RF II, more complex replicative forms appeared late in the reaction, and their possible origin is discussed.

MeSH Terms
Bacteriophage phi X 174/genetics,metabolism DNA Replication DNA, Circular/metabolism DNA, Single-Stranded/metabolism DNA, Superhelical/metabolism DNA, Viral/metabolism Electrophoresis, Agar Gel Escherichia coli/enzymology,genetics Multienzyme Complexes Replicon Templates, Genetic Viral Proteins/metabolism
Chemicals
DNA, Circular DNA, Single-Stranded DNA, Superhelical DNA, Viral Multienzyme Complexes Viral Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Arai K
Arai N
Shlomai J
Kornberg A
References (31)
31 references, click to expand
  1. DNA synthesis in vitro dependent upon phiX174 replicative form I DNA.
    Proc Natl Acad Sci U S A. 1976 Jun;73(6):1887-91 PMID: 778850
  2. Isolation and characterization of the protein coded by gene A of bacteriophage phiX174 DNA.
    Proc Natl Acad Sci U S A. 1976 Aug;73(8):2669-73 PMID: 1066678
  3. Enzymatic replication of viral and complementary strands of duplex DNA of phage phiX174 proceeds by seprate mechanisms.
    Proc Natl Acad Sci U S A. 1976 Sep;73(9):3151-5 PMID: 1067608
  4. A mechanism of duplex DNA replication revealed by enzymatic studies of phage phi X174: catalytic strand separation in advance of replication.
    Proc Natl Acad Sci U S A. 1977 Jan;74(1):193-7 PMID: 138139
  5. Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.
    J Mol Biol. 1977 Feb 15;110(1):119-46 PMID: 845942
  6. Selective inhibition of in vitro DNA synthesis dependent on phiX174 compared with fd DNA. I. Protein requirements for selective inhibition.
    J Biol Chem. 1977 Apr 25;252(8):2524-33 PMID: 140166
  7. Discontinuous replication of replicative form DNA from bacteriophage phiX174.
    Proc Natl Acad Sci U S A. 1977 Jul;74(7):2776-9 PMID: 268627
  8. A simple procedure for resolution of Escherichia coli RNA polymerase holoenzyme from core polymerase.
    Arch Biochem Biophys. 1977 Aug;182(2):404-8 PMID: 332084
  9. phiX174 cistron A protein is a multifunctional enzyme in DNA replication.
    Proc Natl Acad Sci U S A. 1977 Aug;74(8):3198-202 PMID: 269383
  10. Migration of Escherichia coli dnaB protein on the template DNA strand as a mechanism in initiating DNA replication.
    Proc Natl Acad Sci U S A. 1977 Oct;74(10):4190-4 PMID: 144914
  11. dnaB protein of Escherichia coli. Purification and role in the replication of phiX174 DNA.
    J Biol Chem. 1978 Jan 10;253(1):261-9 PMID: 145439
  12. The RNA primer synthesized by primase to initiate phage G4 DNA replication.
    J Biol Chem. 1978 Feb 10;253(3):765-9 PMID: 340458
  13. Nucleotide sequence of the origin of replication in bacteriophage phiX174 RF DNA.
    Nature. 1978 Feb 2;271(5644):417-20 PMID: 628424
  14. Purification of the rep protein of Escherichia coli. An ATPase which separates duplex DNA strands in advance of replication.
    J Biol Chem. 1978 May 10;253(9):3292-7 PMID: 147873
  15. Deoxyuridine triphosphatase of Escherichia coli. Purification, properties, and use as a reagent to reduce uracil incorporation into DNA.
    J Biol Chem. 1978 May 10;253(9):3305-12 PMID: 346589
  16. Purification of subunits of Escherichia coli DNA gyrase and reconstitution of enzymatic activity.
    Proc Natl Acad Sci U S A. 1978 Apr;75(4):1773-7 PMID: 347446
  17. Nucleotide sequences of the separate origins of synthesis of bacteriophage G4 viral and complementary DNA strands.
    Proc Natl Acad Sci U S A. 1978 Mar;75(3):1081-5 PMID: 274698
  18. Bacteriophage phiX174 RF DNA replication in vivo: a biochemical study.
    J Mol Biol. 1978 Oct 25;125(2):167-85 PMID: 731690
  19. Purification and characterization of phiX174 gene A protein. A multifunctional enzyme of duplex DNA replication.
    J Biol Chem. 1979 Jun 25;254(12):5328-32 PMID: 447653
  20. Enzymatic conversion of single-stranded phiX174 and G4 circles to duplex forms: discontinuous replication.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 1:289-93 PMID: 225101
  21. Enzymatic replication of phiX174 duplex circles: continuous synthesis.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 1:295-302 PMID: 157837
  22. A general priming system employing only dnaB protein and primase for DNA replication.
    Proc Natl Acad Sci U S A. 1979 Sep;76(9):4308-12 PMID: 228295
  23. An Escherichia coli replication protein that recognizes a unique sequence within a hairpin region in phi X174 DNA.
    Proc Natl Acad Sci U S A. 1980 Feb;77(2):799-803 PMID: 6444725
  24. Bacteriophage phi-X174 and related viruses.
    Prog Nucleic Acid Res Mol Biol. 1968;8:115-69 PMID: 4874231
  25. RNA synthesis initiates in vitro conversion of M13 DNA to its replicative form.
    Proc Natl Acad Sci U S A. 1972 Apr;69(4):965-9 PMID: 4554537
  26. Conversion of phiX174 viral DNA to double-stranded form by purified Escherichia coli proteins.
    Proc Natl Acad Sci U S A. 1974 Oct;71(10):4120-4 PMID: 4610569
  27. A novel form of RNA polymerase from Escherichia coli.
    Proc Natl Acad Sci U S A. 1974 Nov;71(11):4425-8 PMID: 4612517
  28. The deoxyribonucleic acid unwinding protein of Escherichia coli. Properties and functions in replication.
    J Biol Chem. 1975 Mar 25;250(6):1972-80 PMID: 1090613
  29. The mechanism of replication of phiX174 DNA. XII. Non-random location of gaps in nascent phiX174 RF II DNA.
    J Mol Biol. 1975 Nov 25;99(1):107-23 PMID: 1107559
  30. Isolation of an intermediate which precedes dnaG RNA polymerase participation in enzymatic replication of bacteriophage phi X174 DNA.
    Proc Natl Acad Sci U S A. 1976 Mar;73(3):752-6 PMID: 768984
  31. An enzyme system for replication of duplex circular DNA: the replicative form of phage phi X174.
    Proc Natl Acad Sci U S A. 1976 May;73(5):1594-7 PMID: 1064029
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1980-06-00
Pages
3322-6
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC349607
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]