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PMID: 6449003 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Structure of a cloned circular Moloney murine leukemia virus DNA molecule containing an inverted segment: implications for retrovirus integration.

Shoemaker C, Goff S, Gilboa E, Paskind M, Mitra SW, Baltimore D

Abstract

Closed circular Moloney murine leukemia virus (M-MuLV) DNA was prepared from recently infected cells and cloned in a lambda vector. Four classes of cloned M-MuLV inserts were found: Class I, full length 8.8-kilobase (kb) inserts with two tandem long terminal repeats (LTRs) of 600 base pairs; class 2, 8.2-kb inserts with a single copy of a LTR; class 3, M-MuLV DNA inserts with various portions deleted; and class 4, an 8.8-kb insert with an internal sequence inversion. Determination of nucleotide sequence at the junction between the two LTRs from a class 1 insert suggested that circularization occurred by blunt-end ligation of an 8.8-kb linear DNA. The class 4 molecule had an inversion that was flanked by inverted LTRs, each of which had lost two terminal base pairs at the inversion end points. Also, four base pairs that were present only once in standard M-MuLV DNA were duplicated at either end of the inversion. This molecule was interpreted as resulting from an integrative inversion in which M-MuLV DNA has integrated into itself. Its analysis thus provided explicit information concerning the mechanism by which retrovirus DNA integrates into host cell DNA. Models of retrovirus integration based on bacterial DNA transposition mechanisms are proposed.

MeSH Terms
Bacteriophage lambda/genetics Base Sequence Chromosome Inversion Cloning, Molecular DNA, Circular/genetics DNA, Recombinant DNA, Viral/genetics Escherichia coli/genetics Models, Genetic Moloney murine leukemia virus/genetics Recombination, Genetic
Chemicals
DNA, Circular DNA, Recombinant DNA, Viral
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Shoemaker C
Goff S
Gilboa E
Paskind M
Mitra S W
Baltimore D
References (38)
38 references, click to expand
  1. Selective extraction of polyoma DNA from infected mouse cell cultures.
    J Mol Biol. 1967 Jun 14;26(2):365-9 PMID: 4291934
  2. A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells.
    Proc Natl Acad Sci U S A. 1967 May;57(5):1514-21 PMID: 5231757
  3. Stimulation by cyclic adenosine monophosphate of plasmid deoxyribonucleic acid replication and catabolite repression of the plasmid deoxyribonucleic acid-protein relaxation complex.
    J Bacteriol. 1973 May;114(2):577-91 PMID: 4350343
  4. Measurement of the sequence complexity of cloned Moloney murine leukemia virus 60 to 70S RNA: evidence for a haploid genome.
    J Virol. 1974 Sep;14(3):421-9 PMID: 4368895
  5. Genetic studies with heteroduplex DNA of bacteriophage fl. Asymmetric segregation, base correction and implications for the mechanism of genetic recombination.
    J Mol Biol. 1975 Aug 15;96(3):495-509 PMID: 1100850
  6. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  7. Safer derivatives of bacteriophage lambdagt-lambdaC for use in cloning of recombinant DNA molecules.
    Nature. 1976 Feb 19;259(5544):596-8 PMID: 765843
  8. Ordered transcription of RNA tumor virus genomes.
    J Mol Biol. 1976 Sep 5;106(1):109-31 PMID: 61277
  9. A new method for sequencing DNA.
    Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4 PMID: 265521
  10. Screening lambdagt recombinant clones by hybridization to single plaques in situ.
    Science. 1977 Apr 8;196(4286):180-2 PMID: 322279
  11. [Bifrontal decompressive craniotomy as the treatment for severe cerebral edema].
    Arq Neuropsiquiatr. 1977 Jun;35(2):99-111 PMID: 869742
  12. Translocatable elements in procaryotes.
    Cell. 1977 May;11(1):11-23 PMID: 326413
  13. In vitro packaging of a lambda Dam vector containing EcoRI DNA fragments of Escherichia coli and phage P1.
    Gene. 1977 May;1(3-4):255-80 PMID: 338419
  14. Virus-specific DNA in the cytoplasm of avian sarcoma virus-infected cells is a precursor to covalently closed circular viral DNA in the nucleus.
    J Virol. 1978 Jan;25(1):104-4 PMID: 202729
  15. DNA sequence at the integration sites of the insertion element IS1.
    Cell. 1978 Mar;13(3):411-8 PMID: 350411
  16. Mapping of linear and circular forms of mouse mammary tumor virus DNA with restriction endonucleases: evidence for a large specific deletion occurring at high frequency during circularization.
    Proc Natl Acad Sci U S A. 1978 May;75(5):2112-6 PMID: 209450
  17. Retroviruses.
    Annu Rev Biochem. 1978;47:35-88 PMID: 354499
  18. High frequency of aberrant expression of Moloney murine leukemia virus in clonal infections.
    Cell. 1978 Jul;14(3):601-9 PMID: 80281
  19. Cloning human fetal gamma globin and mouse alpha-type globin DNA: preparation and screening of shotgun collections.
    Science. 1978 Dec 22;202(4374):1279-84 PMID: 725603
  20. The integrated genome of murine leukemia virus.
    Cell. 1978 Nov;15(3):1003-10 PMID: 728982
  21. Mapping unintegrated avian sarcoma virus DNA: termini of linear DNA bear 300 nucleotides present once or twice in two species of circular DNA.
    Cell. 1978 Dec;15(4):1383-95 PMID: 215324
  22. Proviruses of avian sarcoma virus are terminally redundant, co-extensive with unintegrated linear DNA and integrated at many sites.
    Cell. 1978 Dec;15(4):1397-410 PMID: 215325
  23. A method for sequencing restriction fragments with dideoxynucleoside triphosphates.
    Nucleic Acids Res. 1978 Dec;5(12):4537-45 PMID: 745989
  24. Analysis of integrated avian RNA tumor virus DNA in transformed chicken, duck and quail fibroblasts.
    J Virol. 1979 Jan;29(1):170-8 PMID: 219216
  25. Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements.
    Proc Natl Acad Sci U S A. 1979 Apr;76(4):1933-7 PMID: 287033
  26. Restriction endonuclease cleavage of linear and closed circular murine leukemia viral DNAs: discovery of a smaller circular form.
    Cell. 1979 Feb;16(2):323-32 PMID: 455438
  27. Integration of the DNA of mouse mammary tumor virus in virus-infected normal and neoplastic tissue of the mouse.
    Cell. 1979 Feb;16(2):333-45 PMID: 222456
  28. In vitro synthesis of a 9 kbp terminally redundant DNA carrying the infectivity of Moloney murine leukemia virus.
    Cell. 1979 Apr;16(4):863-74 PMID: 88264
  29. Transposition of elements of the 412, copia and 297 dispersed repeated gene families in Drosophila.
    Cell. 1979 Jun;17(2):415-27 PMID: 110463
  30. Sequence analysis at IS1 insertion sites: models for transposition.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 2:1257-61 PMID: 158475
  31. Transposition of the Escherichia coli insertion element gamma generates a five-base-pair repeat.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):4882-6 PMID: 388421
  32. A detailed model of reverse transcription and tests of crucial aspects.
    Cell. 1979 Sep;18(1):93-100 PMID: 509527
  33. Molecular cloning of the Harvey sarcoma virus closed circular DNA intermediates: initial structural and biological characterization.
    J Virol. 1979 Sep;31(3):795-809 PMID: 229252
  34. Molecular cloning of Moloney murine sarcoma virus: arrangement of virus-related sequences within the normal mouse genome.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6314-8 PMID: 392518
  35. Plasmids containing insertion elements are potential transposons.
    Proc Natl Acad Sci U S A. 1980 Feb;77(2):750-4 PMID: 6244582
  36. Effect of Fv-1 gene product on synthesis of linear and supercoiled viral DNA in cells infected with murine leukemia virus.
    J Virol. 1980 Jan;33(1):183-95 PMID: 6245227
  37. Transfection of molecularly cloned Friend murine leukemia virus DNA yields a highly leukemogenic helper-independent type C virus.
    J Virol. 1980 Jan;33(1):475-86 PMID: 6245244
  38. Nucleotide sequences of integrated Moloney sarcoma provirus long terminal repeats and their host and viral junctions.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3937-41 PMID: 6254003
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1980-07-00
Pages
3932-6
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC349741
Subset
IM
Grants
NCI NIH HHS · CA-14051 · United States
NCI NIH HHS · CA-26717 · United States
NCI NIH HHS · N01-CP-53562 · United States
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