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PMID: 8071194 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

In vivo footprinting analysis of Lrp binding to the ilvIH promoter region of Escherichia coli.

Journal of bacteriology ·Vol. 176 ·No. 17 ·1994-09-00 ·Pages 5197-201

Marasco R, Varcamonti M, La Cara F, Ricca E, De Felice M, Sacco M

Abstract

An in vivo footprinting analysis of the ilvIH regulatory region of Escherichia coli showed that the transcription activator Lrp binds to six sites, scattered over 250 bp upstream of the transcriptional start point. When Lrp-mediated activation was impaired by the presence of exogenous leucine, only one promoter-distal site (site 2) was partially protected by Lrp binding. Equilibrium dialysis experiments showed the formation of an Lrp-leucine complex in vitro. These results suggest that leucine negatively affects ilvIH transcription because its interaction with Lrp reduces the efficiency of binding of the regulatory protein to the promoter region.

Related Genes
MeSH Terms
Bacterial Proteins/metabolism Base Sequence Binding Sites DNA, Bacterial/genetics,isolation & purification,metabolism DNA-Binding Proteins/metabolism Escherichia coli/genetics,metabolism Escherichia coli Proteins Kinetics Leucine/metabolism Leucine-Responsive Regulatory Protein Methylation Molecular Sequence Data Operon Promoter Regions, Genetic Regulatory Sequences, Nucleic Acid Transcription Factors/metabolism
Chemicals
Bacterial Proteins DNA, Bacterial DNA-Binding Proteins Escherichia coli Proteins Lrp protein, E coli Transcription Factors Leucine-Responsive Regulatory Protein Leucine
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Marasco R
Dipartimento di Fisiologia Generale ed Ambientale, Università Federico II, Naples, Italy.
Varcamonti M
La Cara F
Ricca E
De Felice M
Sacco M
References (26)
26 references, click to expand
  1. Unusual organization of the ilvIH promoter of Escherichia coli.
    J Bacteriol. 1985 Jul;163(1):186-98 PMID: 3891724
  2. Lrp, a global regulatory protein of Escherichia coli, binds co-operatively to multiple sites and activates transcription of ilvIH.
    J Mol Biol. 1993 Jan 20;229(2):306-18 PMID: 8429549
  3. A stereospecific alignment between the promoter and the cis-acting sequence is required for Lrp-dependent activation of ilvIH transcription in Escherichia coli.
    FEMS Microbiol Lett. 1993 Mar 1;107(2-3):331-6 PMID: 8472914
  4. Characterization of Lrp, and Escherichia coli regulatory protein that mediates a global response to leucine.
    J Biol Chem. 1991 Jun 15;266(17):10768-74 PMID: 2040596
  5. A protein that binds to the regulatory region of the Escherichia coli ilvIH operon.
    J Bacteriol. 1989 Mar;171(3):1658-64 PMID: 2646291
  6. The tdh and serA operons of Escherichia coli: mutational analysis of the regulatory elements of leucine-responsive genes.
    J Bacteriol. 1991 Oct;173(19):5944-53 PMID: 1917830
  7. Characterization of the regulon controlled by the leucine-responsive regulatory protein in Escherichia coli.
    J Bacteriol. 1992 Feb;174(4):1109-18 PMID: 1346534
  8. The ilvIH operon of Escherichia coli is positively regulated.
    J Bacteriol. 1990 Aug;172(8):4563-70 PMID: 2115869
  9. The acetohydroxy acid synthase III isoenzyme of Escherichia coli K-12: regulation of synthesis by leucine.
    Biochem Biophys Res Commun. 1977 Nov 7;79(1):82-7 PMID: 336048
  10. The leucine-responsive regulatory protein: more than a regulator?
    Trends Biochem Sci. 1993 Jul;18(7):260-3 PMID: 8212136
  11. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  12. The leucine regulon of Escherichia coli K-12: a mutation in rblA alters expression of L-leucine-dependent metabolic operons.
    J Bacteriol. 1990 Aug;172(8):4529-35 PMID: 2165479
  13. Physical characterization of the ilvHI operon of Escherichia coli K-12.
    J Bacteriol. 1981 Sep;147(3):797-804 PMID: 6168634
  14. opp-lac Operon fusions and transcriptional regulation of the Escherichia coli trp-linked oligopeptide permease.
    J Bacteriol. 1986 Feb;165(2):434-42 PMID: 3080404
  15. Acetohydroxy acid synthase isoenzymes of Escherichia coli K12 and Salmonella typhimurium.
    Ann Microbiol (Paris). 1982 Mar-Apr;133(2):251-6 PMID: 6805381
  16. Leucine-responsive regulatory protein controls the expression of both the pap and fan pili operons in Escherichia coli.
    Proc Natl Acad Sci U S A. 1992 May 15;89(10):4250-4 PMID: 1350087
  17. An amino-terminal fragment of lac repressor binds specifically to lac operator.
    Proc Natl Acad Sci U S A. 1978 Dec;75(12):5851-4 PMID: 16592594
  18. Repression of Escherichia coli pyridine nucleotide transhydrogenase by leucine.
    J Bacteriol. 1978 May;134(2):394-400 PMID: 350821
  19. A simplified method for in vivo footprinting using DMS.
    Nucleic Acids Res. 1990 Sep 25;18(18):5574 PMID: 2216750
  20. Lrp, a leucine-responsive protein, regulates branched-chain amino acid transport genes in Escherichia coli.
    J Bacteriol. 1992 Jan;174(1):108-15 PMID: 1729203
  21. Regulation of the gltBDF operon of Escherichia coli: how is a leucine-insensitive operon regulated by the leucine-responsive regulatory protein?
    J Bacteriol. 1993 Nov;175(22):7160-9 PMID: 7901196
  22. Complex transcriptional control of the sigma s-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationary-phase response of Escherichia coli.
    J Bacteriol. 1993 Dec;175(24):7910-7 PMID: 8253679
  23. Mutations affecting the ability of Escherichia coli Lrp to bind DNA, activate transcription, or respond to leucine.
    J Bacteriol. 1993 Feb;175(4):1110-7 PMID: 8432705
  24. In vitro transcription from the Escherichia coli ilvIH promoter.
    J Bacteriol. 1992 Dec;174(23):7648-55 PMID: 1447135
  25. Lambda placMu insertions in genes of the leucine regulon: extension of the regulon to genes not regulated by leucine.
    J Bacteriol. 1992 Mar;174(6):1948-55 PMID: 1532173
  26. Lrp stimulates phase variation of type 1 fimbriation in Escherichia coli K-12.
    J Bacteriol. 1993 Jan;175(1):27-36 PMID: 8093239
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1994-09-00
Pages
5197-201
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC196701
Subset
IM
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