Home LiteratureArticle Details
PMID: 8098333 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

The pas8 mutant of Pichia pastoris exhibits the peroxisomal protein import deficiencies of Zellweger syndrome cells--the PAS8 protein binds to the COOH-terminal tripeptide peroxisomal targeting signal, and is a member of the TPR protein family.

The Journal of cell biology ·Vol. 121 ·No. 4 ·1993-05-00 ·Pages 761-74

McCollum D, Monosov E, Subramani S

Abstract

We previously described the isolation of mutants of the yeast Pichia pastoris that are deficient in peroxisome assembly (pas mutants). We describe the characterization of one of these mutants, pas8, and the cloning of the PAS8 gene. The pas8 mutant is deficient for growth, but not for division or segregation of peroxisomes, or for induction of peroxisomal proteins. Two distinct peroxisomal targeting signals, PTS1 and PTS2, have been identified that are sufficient to direct proteins to the peroxisomal matrix. We show that the pas8 mutant is deficient in the import of proteins with the PTS1, but not the PTS2, targeting signal. This is the same import deficiency as that found in cells from patients with the lethal human peroxisomal disorder Zellweger syndrome. Cloning and sequencing of the PAS8 gene reveals that it is a novel member of the tetratricopeptide repeat gene family. Antibodies raised against bacterially expressed PAS8 are used to show that PAS8 is a peroxisomal, membrane-associated protein. Also, we have found that in vitro translated PAS8 protein is capable of binding the PTS1 targeting signal specifically, raising the possibility that PAS8 is a PTS1 receptor.

MeSH Terms
Acetyl-CoA C-Acetyltransferase/metabolism Amino Acid Sequence Base Sequence Biological Transport Cloning, Molecular DNA, Fungal Fungal Proteins/genetics,metabolism Humans Luciferases/metabolism Membrane Proteins/genetics,metabolism Methanol/pharmacology Microbodies/metabolism Microscopy, Immunoelectron Molecular Sequence Data Mutation Oleic Acid Oleic Acids/pharmacology Peroxisome-Targeting Signal 1 Receptor Phenotype Pichia/genetics,metabolism,ultrastructure Protein Biosynthesis Protein Sorting Signals/metabolism Receptors, Cytoplasmic and Nuclear Repetitive Sequences, Nucleic Acid Zellweger Syndrome/metabolism
Chemicals
DNA, Fungal Fungal Proteins Membrane Proteins Oleic Acids PEX5 protein, Pichia pastoris Peroxisome-Targeting Signal 1 Receptor Protein Sorting Signals Receptors, Cytoplasmic and Nuclear Oleic Acid Luciferases Acetyl-CoA C-Acetyltransferase Methanol
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
McCollum D
Department of Biology, University of California, San Diego, La Jolla 92093-0322.
Monosov E
Subramani S
References (52)
52 references, click to expand
  1. Peroxisome biogenesis in Saccharomyces cerevisiae.
    Antonie Van Leeuwenhoek. 1992 Aug;62(1-2):63-78 PMID: 1444337
  2. Biosynthesis of the peroxisomal dihydroxyacetone synthase from Hansenula polymorpha in Saccharomyces cerevisiae induces growth but not proliferation of peroxisomes.
    Curr Genet. 1989 Jul;16(1):13-20 PMID: 2676206
  3. An efficient screen for peroxisome-deficient mutants of Pichia pastoris.
    J Bacteriol. 1992 Aug;174(15):4943-51 PMID: 1629154
  4. The Pas2 protein essential for peroxisome biogenesis is related to ubiquitin-conjugating enzymes.
    Nature. 1992 Sep 3;359(6390):73-6 PMID: 1326082
  5. Improvements in epoxy resin embedding methods.
    J Biophys Biochem Cytol. 1961 Feb;9:409-14 PMID: 13764136
  6. Peroxisomal protein import is conserved between yeast, plants, insects and mammals.
    EMBO J. 1990 Jan;9(1):85-90 PMID: 2104803
  7. Structural comparison of the Pichia pastoris alcohol oxidase genes.
    Yeast. 1989 May-Jun;5(3):167-77 PMID: 2660463
  8. The TPR snap helix: a novel protein repeat motif from mitosis to transcription.
    Trends Biochem Sci. 1991 May;16(5):173-7 PMID: 1882418
  9. Evolutionary conservation of a microbody targeting signal that targets proteins to peroxisomes, glyoxysomes, and glycosomes.
    J Cell Biol. 1991 Sep;114(5):893-904 PMID: 1831458
  10. Alcohol oxidase from Hansenula polymorpha CBS 4732.
    Methods Enzymol. 1990;188:420-7 PMID: 2280715
  11. Biogenesis of peroxisomes.
    Annu Rev Cell Biol. 1985;1:489-530 PMID: 3916321
  12. A novel, cleavable peroxisomal targeting signal at the amino-terminus of the rat 3-ketoacyl-CoA thiolase.
    EMBO J. 1991 Nov;10(11):3255-62 PMID: 1680677
  13. Aberrant subcellular localization of peroxisomal 3-ketoacyl-CoA thiolase in the Zellweger syndrome and rhizomelic chondrodysplasia punctata.
    Pediatr Res. 1990 Mar;27(3):304-10 PMID: 2181395
  14. Sequence of the Saccharomyces cerevisiae CTA1 gene and amino acid sequence of catalase A derived from it.
    Eur J Biochem. 1988 Sep 1;176(1):159-63 PMID: 3046940
  15. Firefly luciferase gene: structure and expression in mammalian cells.
    Mol Cell Biol. 1987 Feb;7(2):725-37 PMID: 3821727
  16. Targeting of proteins into the peroxisomal matrix.
    J Membr Biol. 1992 Jan;125(2):99-106 PMID: 1552566
  17. Peroxisomal membrane ghosts in Zellweger syndrome--aberrant organelle assembly.
    Science. 1988 Mar 25;239(4847):1536-8 PMID: 3281254
  18. The large-scale separation of peroxisomes, mitochondria, and lysosomes from the livers of rats injected with triton WR-1339. Improved isolation procedures, automated analysis, biochemical and morphological properties of fractions.
    J Cell Biol. 1968 May;37(2):482-513 PMID: 4297786
  19. Peroxisomal assembly: membrane proliferation precedes the induction of the abundant matrix proteins in the methylotrophic yeast Candida boidinii.
    J Cell Sci. 1990 Aug;96 ( Pt 4):583-90 PMID: 2283358
  20. Targeting signals for protein import into peroxisomes.
    Cell Biochem Funct. 1992 Sep;10(3):193-9 PMID: 1423900
  21. PAS1, a yeast gene required for peroxisome biogenesis, encodes a member of a novel family of putative ATPases.
    Cell. 1991 Feb 8;64(3):499-510 PMID: 1825027
  22. Restoration by a 35K membrane protein of peroxisome assembly in a peroxisome-deficient mammalian cell mutant.
    Nature. 1991 Mar 7;350(6313):77-81 PMID: 1750930
  23. Snap helix with knob and hole: essential repeats in S. pombe nuclear protein nuc2+.
    Cell. 1990 Jan 26;60(2):319-28 PMID: 2297790
  24. One-step preparation of competent Escherichia coli: transformation and storage of bacterial cells in the same solution.
    Proc Natl Acad Sci U S A. 1989 Apr;86(7):2172-5 PMID: 2648393
  25. Two independent peroxisomal targeting signals in catalase A of Saccharomyces cerevisiae.
    J Cell Biol. 1993 Feb;120(3):665-73 PMID: 8425895
  26. A conserved tripeptide sorts proteins to peroxisomes.
    J Cell Biol. 1989 May;108(5):1657-64 PMID: 2654139
  27. A repeating amino acid motif in CDC23 defines a family of proteins and a new relationship among genes required for mitosis and RNA synthesis.
    Cell. 1990 Jan 26;60(2):307-17 PMID: 2404612
  28. Pichia pastoris as a host system for transformations.
    Mol Cell Biol. 1985 Dec;5(12):3376-85 PMID: 3915774
  29. cDNA and deduced amino acid sequence of Drosophila catalase.
    Nucleic Acids Res. 1990 Jun 25;18(12):3663 PMID: 2362827
  30. Targeting efficiencies of various permutations of the consensus C-terminal tripeptide peroxisomal targeting signal.
    FEBS Lett. 1992 Jun 29;305(2):133-6 PMID: 1618341
  31. Peroxisomal multifunctional beta-oxidation protein of Saccharomyces cerevisiae. Molecular analysis of the fox2 gene and gene product.
    J Biol Chem. 1992 Apr 5;267(10):6646-53 PMID: 1551874
  32. The nuclear migration signal of Xenopus laevis nucleoplasmin.
    EMBO J. 1987 Sep;6(9):2617-25 PMID: 3119324
  33. The CYC8 and TUP1 proteins involved in glucose repression in Saccharomyces cerevisiae are associated in a protein complex.
    Mol Cell Biol. 1991 Jun;11(6):3307-16 PMID: 2038333
  34. Development of the yeast Pichia pastoris as a model organism for a genetic and molecular analysis of peroxisome assembly.
    Yeast. 1992 Aug;8(8):613-28 PMID: 1441741
  35. Cytosol-dependent peroxisomal protein import in a permeabilized cell system.
    J Cell Biol. 1993 Feb;120(3):675-85 PMID: 8425896
  36. Isolation of peroxisome assembly mutants from Saccharomyces cerevisiae with different morphologies using a novel positive selection procedure.
    J Cell Biol. 1992 Oct;119(1):153-62 PMID: 1356111
  37. The carboxyl-terminal tripeptide Ala-Lys-Ile is essential for targeting Candida tropicalis trifunctional enzyme to yeast peroxisomes.
    J Biol Chem. 1991 Dec 5;266(34):23197-203 PMID: 1744117
  38. Transport of microinjected proteins into peroxisomes of mammalian cells: inability of Zellweger cell lines to import proteins with the SKL tripeptide peroxisomal targeting signal.
    Mol Cell Biol. 1992 Feb;12(2):531-41 PMID: 1732729
  39. Amino-terminal presequence of the precursor of peroxisomal 3-ketoacyl-CoA thiolase is a cleavable signal peptide for peroxisomal targeting.
    Biochem Biophys Res Commun. 1991 Dec 31;181(3):947-54 PMID: 1764107
  40. Peroxisomal integral membrane proteins in control and Zellweger fibroblasts.
    J Biol Chem. 1988 Jul 25;263(21):10502-9 PMID: 3292528
  41. Protein import into yeast mitochondria is accelerated by the outer membrane protein MAS70.
    EMBO J. 1990 Oct;9(10):3191-200 PMID: 2170106
  42. Isolation and characterization of membranes from oleic acid-induced peroxisomes of Candida tropicalis.
    J Cell Sci. 1990 Mar;95 ( Pt 3):463-70 PMID: 2384524
  43. Isolation and characterization of Chinese hamster ovary cell mutants defective in assembly of peroxisomes.
    J Cell Biol. 1990 Mar;110(3):651-60 PMID: 1689731
  44. Peroxisomes and peroxisomal disorders.
    Ala J Med Sci. 1988 Jan;25(1):54-8 PMID: 2449826
  45. PAS3, a Saccharomyces cerevisiae gene encoding a peroxisomal integral membrane protein essential for peroxisome biogenesis.
    J Cell Biol. 1991 Sep;114(6):1167-78 PMID: 1894692
  46. Expression of the lacZ gene from two methanol-regulated promoters in Pichia pastoris.
    Nucleic Acids Res. 1987 May 11;15(9):3859-76 PMID: 3108861
  47. Isolation of animal cell mutants deficient in plasmalogen biosynthesis and peroxisome assembly.
    Proc Natl Acad Sci U S A. 1986 Jul;83(14):5170-4 PMID: 3460088
  48. Biosynthesis of peroxisomal enzymes in the methylotrophic yeast Hansenula polymorpha.
    Proc Natl Acad Sci U S A. 1983 Nov;80(22):6872-6 PMID: 16593389
  49. An electron-transport system associated with the outer membrane of liver mitochondria. A biochemical and morphological study.
    J Cell Biol. 1967 Feb;32(2):415-38 PMID: 10976232
  50. Mini-prep in ten minutes.
    Biotechniques. 1990 Feb;8(2):172-3 PMID: 2317372
  51. Isolation of peroxisome-deficient mutants of Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1989 Jul;86(14):5419-23 PMID: 2568633
  52. TPR proteins as essential components of the yeast cell cycle.
    Cold Spring Harb Symp Quant Biol. 1991;56:663-73 PMID: 1819514
Article Info
Journal
The Journal of cell biology
Abbr.
J Cell Biol
ISSN
0021-9525
Published
1993-05-00
Pages
761-74
Language
English
Region
United States
NLM ID
0375356
PMCID
PMC2119792
Subset
IM
Grants
NIDDK NIH HHS · DK 41737 · United States
NIGMS NIH HHS · GM 15971 · United States
Databases
GENBANK
Z19592
Corrections
ErratumIn
-
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]