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PMID: 8391108 Published · ppublish English Comparative Study Journal Article

emb-5, a gene required for the correct timing of gut precursor cell division during gastrulation in Caenorhabditis elegans, encodes a protein similar to the yeast nuclear protein SPT6.

Molecular & general genetics : MGG ·Vol. 239 ·No. 3 ·1993-06-00 ·Pages 313-22

Nishiwaki K, Sano T, Miwa J

Abstract

The emb-5 gene is required for the correct timing of division of gut precursor cells during gastrulation in Caenorhabditis elegans. We have now characterized the molecular structure of emb-5. The predicted emb-5-encoded protein (EMB-5) possesses an extremely acidic amino-terminus and overall similarity to the Saccharomyces cerevisiae nuclear protein SPT6, which has been shown to affect the transcription of a variety of genes and suggested to play a role in chromatin assembly or modification. EMB-5 may function in the control of cell cycle timing by modulating chromatin structure and consequently affects morphogenesis of C. elegans.

Related Genes
MeSH Terms
Amino Acid Sequence Animals Base Sequence Caenorhabditis elegans/embryology,genetics Cell Division/genetics Chromosome Mapping Chromosome Walking DNA Mutational Analysis DNA Transposable Elements Female Fungal Proteins/genetics Gastrula/cytology Genes, Fungal Genes, Helminth Helminth Proteins/chemistry,genetics Histone Chaperones Intestines/embryology Male Molecular Sequence Data Morphogenesis Nuclear Proteins/genetics Saccharomyces cerevisiae/genetics Saccharomyces cerevisiae Proteins Transcription Factors/chemistry,genetics Transcriptional Elongation Factors Transformation, Genetic
Chemicals
DNA Transposable Elements Fungal Proteins Helminth Proteins Histone Chaperones Nuclear Proteins SPT6 protein, S cerevisiae Saccharomyces cerevisiae Proteins Transcription Factors Transcriptional Elongation Factors
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Nishiwaki K
Fundamental Research Laboratories, NEC Corporation, Tsukuba, Japan.
Sano T
Miwa J
References (43)
43 references, click to expand
  1. Parental effects and phenotypic characterization of mutations that affect early development in Caenorhabditis elegans.
    Dev Biol. 1980 Feb;74(2):446-69 PMID: 7371984
  2. Cell lineages of the embryo of the nematode Caenorhabditis elegans.
    Proc Natl Acad Sci U S A. 1978 Jan;75(1):376-80 PMID: 272653
  3. Universal control mechanism regulating onset of M-phase.
    Nature. 1990 Apr 5;344(6266):503-8 PMID: 2138713
  4. Transcript analysis of glp-1 and lin-12, homologous genes required for cell interactions during development of C. elegans.
    Cell. 1989 Aug 11;58(3):565-71 PMID: 2758467
  5. Development of the reproductive system of Caenorhabditis elegans.
    Dev Biol. 1976 Mar;49(1):200-19 PMID: 943344
  6. Genetic analysis of temperature-sensitive embryogenesis mutants in Caenorhabditis elegans.
    Dev Biol. 1981 May;84(1):193-205 PMID: 7250492
  7. The sequence 5'-AAUAAA-3'forms parts of the recognition site for polyadenylation of late SV40 mRNAs.
    Cell. 1981 Apr;24(1):251-60 PMID: 6113054
  8. Isolation and analysis of a novel class of suppressor of Ty insertion mutations in Saccharomyces cerevisiae.
    Genetics. 1988 Feb;118(2):203-12 PMID: 2834263
  9. Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences.
    EMBO J. 1991 Dec;10(12):3959-70 PMID: 1935914
  10. Caenorhabditis elegans compensates for the difference in X chromosome dosage between the sexes by regulating transcript levels.
    Cell. 1986 Dec 26;47(6):871-81 PMID: 3779843
  11. Genetics and mode of expression of temperature-sensitive mutations arresting embryonic development in Caenorhabditis elegans.
    Dev Biol. 1980 Apr;76(1):160-74 PMID: 7380089
  12. Synthesis and processing of asparagine-linked oligosaccharides.
    Annu Rev Biochem. 1981;50:555-83 PMID: 7023366
  13. Cell lineages and developmental defects of temperature-sensitive embryonic arrest mutants in Caenorhabditis elegans.
    Dev Biol. 1980 Apr;76(1):141-59 PMID: 7380087
  14. Isolation of a human cyclin cDNA: evidence for cyclin mRNA and protein regulation in the cell cycle and for interaction with p34cdc2.
    Cell. 1989 Sep 8;58(5):833-46 PMID: 2570636
  15. The SPT6 gene is essential for growth and is required for delta-mediated transcription in Saccharomyces cerevisiae.
    Mol Cell Biol. 1987 Feb;7(2):679-86 PMID: 3029564
  16. Anionic regions in nuclear proteins.
    J Cell Biol. 1987 Oct;105(4):1479-82 PMID: 3312230
  17. SPT6, an essential gene that affects transcription in Saccharomyces cerevisiae, encodes a nuclear protein with an extremely acidic amino terminus.
    Mol Cell Biol. 1990 Sep;10(9):4935-41 PMID: 2201908
  18. The role of CDC28 and cyclins during mitosis in the budding yeast S. cerevisiae.
    Cell. 1991 Apr 5;65(1):145-61 PMID: 1849457
  19. Two interdependent basic domains in nucleoplasmin nuclear targeting sequence: identification of a class of bipartite nuclear targeting sequence.
    Cell. 1991 Feb 8;64(3):615-23 PMID: 1991323
  20. Extrachromosomal DNA transformation of Caenorhabditis elegans.
    Mol Cell Biol. 1985 Dec;5(12):3484-96 PMID: 3837845
  21. Changes in histone gene dosage alter transcription in yeast.
    Genes Dev. 1988 Feb;2(2):150-9 PMID: 2834270
  22. The embryonic cell lineage of the nematode Caenorhabditis elegans.
    Dev Biol. 1983 Nov;100(1):64-119 PMID: 6684600
  23. The Caenorhabditis elegans gene lin-10 is broadly expressed while required specifically for the determination of vulval cell fates.
    Genes Dev. 1990 Mar;4(3):357-71 PMID: 2159938
  24. SSN20 is an essential gene with mutant alleles that suppress defects in SUC2 transcription in Saccharomyces cerevisiae.
    Mol Cell Biol. 1987 Feb;7(2):672-8 PMID: 3547080
  25. The CCR4 gene from Saccharomyces cerevisiae is required for both nonfermentative and spt-mediated gene expression.
    Genetics. 1990 Feb;124(2):283-91 PMID: 2407614
  26. An interactive graphics program for comparing and aligning nucleic acid and amino acid sequences.
    Nucleic Acids Res. 1982 May 11;10(9):2951-61 PMID: 7099970
  27. The genetics of Caenorhabditis elegans.
    Genetics. 1974 May;77(1):71-94 PMID: 4366476
  28. Activation of a transposable element in the germ line but not the soma of Caenorhabditis elegans.
    Nature. 1987 Aug 20-26;328(6132):726-8 PMID: 3039378
  29. Promoter sequences of eukaryotic protein-coding genes.
    Science. 1980 Sep 19;209(4463):1406-14 PMID: 6251548
  30. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  31. Analysis of the constancy of DNA sequences during development and evolution of the nematode Caenorhabditis elegans.
    Proc Natl Acad Sci U S A. 1979 Mar;76(3):1333-7 PMID: 286315
  32. Evidence for a transposon in Caenorhabditis elegans.
    Cell. 1983 Jan;32(1):55-65 PMID: 6297788
  33. Maternal effects and temperature-sensitive period of mutations affecting embryogenesis in Caenorhabditis elegans.
    Dev Biol. 1983 Aug;98(2):465-80 PMID: 6683689
  34. Mutations affecting Ty-mediated expression of the HIS4 gene of Saccharomyces cerevisiae.
    Genetics. 1984 Jun;107(2):179-97 PMID: 6329902
  35. New bacteriophage lambda vectors with positive selection for cloned inserts.
    Methods Enzymol. 1983;101:3-19 PMID: 6310332
  36. Suppressors of SNF2 mutations restore invertase derepression and cause temperature-sensitive lethality in yeast.
    Genetics. 1986 Apr;112(4):741-53 PMID: 3514373
  37. Integrative transformation of Caenorhabditis elegans.
    EMBO J. 1986 Oct;5(10):2673-80 PMID: 16453714
  38. Identification of new genes involved in the regulation of yeast alcohol dehydrogenase II.
    Genetics. 1984 Dec;108(4):833-44 PMID: 6392016
  39. A cyclin B homolog in S. cerevisiae: chronic activation of the Cdc28 protein kinase by cyclin prevents exit from mitosis.
    Cell. 1991 Apr 5;65(1):163-74 PMID: 1849458
  40. Cell-lineage and developmental defects of temperature-sensitive embryonic arrest mutants of the nematodeCaenorhabditis elegans.
    Wilehm Roux Arch Dev Biol. 1984 May;193(3):164-179 PMID: 28305458
  41. Production of single-stranded plasmid DNA.
    Methods Enzymol. 1987;153:3-11 PMID: 3323803
  42. Three genes are required for trans-activation of Ty transcription in yeast.
    Genetics. 1987 Apr;115(4):649-56 PMID: 3034719
  43. Toward a physical map of the genome of the nematode Caenorhabditis elegans.
    Proc Natl Acad Sci U S A. 1986 Oct;83(20):7821-5 PMID: 16593771
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1993-06-00
Pages
313-22
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Databases
GENBANK
D14635
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