Home LiteratureArticle Details
PMID: 8419915 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

The type 1 human immunodeficiency virus Tat binding protein is a transcriptional activator belonging to an additional family of evolutionarily conserved genes.

Ohana B, Moore PA, Ruben SM, Southgate CD, Green MR, Rosen CA

Abstract

The type 1 human immunodeficiency virus Tat protein is a powerful transcriptional activator when bound to an RNA structure (TAR) present at the extreme 5' terminus of viral mRNA. Since transcriptional activation requires binding of Tat to RNA, it has been suggested that Tat enhances initiation or elongation through a direct interaction with cellular transcription factors. Here we show through protein fusion experiments that the previously identified cellular Tat binding protein, TBP-1, although unable to bind DNA, is a strong transcriptional activator when brought into proximity of several promoter elements. Transcriptional activity depends upon the integrity of at least two highly conserved domains: one resembling a nucleotide-binding motif and the other motif common to proteins with helicase activity. Our studies further reveal that TBP-1 represents one member of a large, highly conserved gene family that encodes proteins demonstrating strong amino acid conservation across species. Finally, we identified a second family member that, although 77% similar to TBP-1, does not activate transcription from the promoters examined. This finding, together with the observation that TBP-1 does not activate each promoter examined, suggests that this gene family may encode promoter-specific transcriptional activators.

MeSH Terms
ATPases Associated with Diverse Cellular Activities Amino Acid Sequence Animals Biological Evolution Blotting, Western Cell Line Chloramphenicol O-Acetyltransferase/genetics,metabolism Cloning, Molecular DNA, Viral/genetics DNA-Binding Proteins/genetics,metabolism Fungal Proteins/genetics,metabolism Gene Products, tat/metabolism Genes, Viral HIV-1/genetics Molecular Sequence Data Multigene Family Open Reading Frames Plasmids Proteasome Endopeptidase Complex RNA, Messenger/genetics,metabolism Recombinant Fusion Proteins/metabolism Restriction Mapping Saccharomyces cerevisiae/genetics Saccharomyces cerevisiae Proteins Sequence Deletion Sequence Homology, Amino Acid Trans-Activators/genetics,metabolism Transcription Factors Transcription, Genetic Transfection tat Gene Products, Human Immunodeficiency Virus
Chemicals
DNA, Viral DNA-Binding Proteins Fungal Proteins GAL4 protein, S cerevisiae Gene Products, tat RNA, Messenger Recombinant Fusion Proteins Saccharomyces cerevisiae Proteins Trans-Activators Transcription Factors tat Gene Products, Human Immunodeficiency Virus Chloramphenicol O-Acetyltransferase Proteasome Endopeptidase Complex ATPases Associated with Diverse Cellular Activities PSMC3 protein, human
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Ohana B
Department of Gene Regulation, Roche Institute of Molecular Biology, Nutley, NJ 07110.
Moore P A
Ruben S M
Southgate C D
Green M R
Rosen C A
References (47)
47 references, click to expand
  1. New human gene encoding a positive modulator of HIV Tat-mediated transactivation.
    Nature. 1992 Jun 25;357(6380):700-2 PMID: 1377363
  2. Alterations in a yeast protein resembling HIV Tat-binding protein relieve requirement for an acidic activation domain in GAL4.
    Nature. 1992 Jun 25;357(6380):698-700 PMID: 1614516
  3. Isolation of a yeast gene encoding a protein homologous to the human Tat-binding protein TBP-1.
    DNA Cell Biol. 1992 Oct;11(8):579-85 PMID: 1388730
  4. Recombinant genomes which express chloramphenicol acetyltransferase in mammalian cells.
    Mol Cell Biol. 1982 Sep;2(9):1044-51 PMID: 6960240
  5. Immunoglobulin gene transcription is activated by downstream sequence elements.
    Cell. 1983 Jul;33(3):741-8 PMID: 6409419
  6. The location of cis-acting regulatory sequences in the human T cell lymphotropic virus type III (HTLV-III/LAV) long terminal repeat.
    Cell. 1985 Jul;41(3):813-23 PMID: 2988790
  7. Trans-activator gene of human T-lymphotropic virus type III (HTLV-III).
    Science. 1985 Jul 5;229(4708):69-73 PMID: 2990040
  8. Location of the trans-activating region on the genome of human T-cell lymphotropic virus type III.
    Science. 1985 Jul 5;229(4708):74-7 PMID: 2990041
  9. The trans-activator gene of the human T cell lymphotropic virus type III is required for replication.
    Cell. 1986 Mar 28;44(6):941-7 PMID: 2420471
  10. Use of a cDNA clone to identify a supposed precursor protein containing valosin.
    Nature. 1987 Feb 5-11;325(6104):542-5 PMID: 3468358
  11. Regulation of mRNA accumulation by a human immunodeficiency virus trans-activator protein.
    Cell. 1987 Feb 27;48(4):691-701 PMID: 3643816
  12. A family of yeast expression vectors containing the phage f1 intergenic region.
    Gene. 1987;52(2-3):225-33 PMID: 3038686
  13. GAL4 activates gene expression in mammalian cells.
    Cell. 1988 Jan 29;52(2):161-7 PMID: 2830021
  14. HIV-1 tat trans-activation requires the loop sequence within tar.
    Nature. 1988 Jul 14;334(6178):165-7 PMID: 3386755
  15. Functional dissection of VP16, the trans-activator of herpes simplex virus immediate early gene expression.
    Genes Dev. 1988 Jun;2(6):718-29 PMID: 2843425
  16. Characterization of a component of the yeast secretion machinery: identification of the SEC18 gene product.
    Mol Cell Biol. 1988 Oct;8(10):4098-109 PMID: 3054509
  17. Structural arrangements of transcription control domains within the 5'-untranslated leader regions of the HIV-1 and HIV-2 promoters.
    Genes Dev. 1988 Sep;2(9):1101-14 PMID: 2847959
  18. Structural and functional characterization of human immunodeficiency virus tat protein.
    J Virol. 1989 Jan;63(1):1-8 PMID: 2535718
  19. SGV1 encodes a CDC28/cdc2-related kinase required for a G alpha subunit-mediated adaptive response to pheromone in S. cerevisiae.
    Cell. 1991 May 31;65(5):785-95 PMID: 1828190
  20. Epitope tagging and protein surveillance.
    Methods Enzymol. 1991;194:508-19 PMID: 1706460
  21. Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm.
    Cell. 1989 May 19;57(4):573-83 PMID: 2655924
  22. Transcriptional repression by YY1, a human GLI-Krüppel-related protein, and relief of repression by adenovirus E1A protein.
    Cell. 1991 Oct 18;67(2):377-88 PMID: 1655281
  23. The HIV-1 Tat protein activates transcription from an upstream DNA-binding site: implications for Tat function.
    Genes Dev. 1991 Dec;5(12B):2496-507 PMID: 1752440
  24. Functional characterization of the NF-kappa B p65 transcriptional activator and an alternatively spliced derivative.
    Mol Cell Biol. 1992 Feb;12(2):444-54 PMID: 1732726
  25. D-E-A-D protein family of putative RNA helicases.
    Mol Microbiol. 1992 Feb;6(3):283-91 PMID: 1552844
  26. Transactivation and transformation by Myb are negatively regulated by a leucine-zipper structure.
    Proc Natl Acad Sci U S A. 1992 Apr 1;89(7):3088-92 PMID: 1557416
  27. HIV-1 Tat acts as a processivity factor in vitro in conjunction with cellular elongation factors.
    Genes Dev. 1992 Apr;6(4):655-66 PMID: 1559613
  28. Human immunodeficiency virus type 1 LTR TATA and TAR region sequences required for transcriptional regulation.
    EMBO J. 1989 Mar;8(3):765-78 PMID: 2721501
  29. A fusion protein required for vesicle-mediated transport in both mammalian cells and yeast.
    Nature. 1989 Jun 1;339(6223):355-9 PMID: 2657434
  30. Specific binding of a HeLa cell nuclear protein to RNA sequences in the human immunodeficiency virus transactivating region.
    Proc Natl Acad Sci U S A. 1989 Jul;86(13):4858-62 PMID: 2544877
  31. NF-kappa B: a pleiotropic mediator of inducible and tissue-specific gene control.
    Cell. 1989 Jul 28;58(2):227-9 PMID: 2665943
  32. A novel genetic system to detect protein-protein interactions.
    Nature. 1989 Jul 20;340(6230):245-6 PMID: 2547163
  33. Eukaryotic transcriptional regulatory proteins.
    Annu Rev Biochem. 1989;58:799-839 PMID: 2673023
  34. A vector for expressing GAL4(1-147) fusions in mammalian cells.
    Nucleic Acids Res. 1989 Sep 25;17(18):7539 PMID: 2798115
  35. Identification of cellular proteins that bind to the human immunodeficiency virus type 1 trans-activation-responsive TAR element RNA.
    Proc Natl Acad Sci U S A. 1989 Oct;86(20):7828-32 PMID: 2510154
  36. trans activation of human immunodeficiency virus type 1 is sequence specific for both the single-stranded bulge and loop of the trans-acting-responsive hairpin: a quantitative analysis.
    J Virol. 1989 Dec;63(12):5501-4 PMID: 2479775
  37. Activation of yeast polymerase II transcription by herpesvirus VP16 and GAL4 derivatives in vitro.
    Mol Cell Biol. 1989 Nov;9(11):4746-9 PMID: 2557540
  38. Identification and characterization of a HeLa nuclear protein that specifically binds to the trans-activation-response (TAR) element of human immunodeficiency virus.
    Proc Natl Acad Sci U S A. 1990 May;87(9):3624-8 PMID: 2333305
  39. A cDNA for a protein that interacts with the human immunodeficiency virus Tat transactivator.
    Science. 1990 Jun 29;248(4963):1650-3 PMID: 2194290
  40. Fragments of the HIV-1 Tat protein specifically bind TAR RNA.
    Science. 1990 Sep 14;249(4974):1281-5 PMID: 2205002
  41. HIV-1 Tat protein trans-activates transcription in vitro.
    Cell. 1990 Nov 16;63(4):791-802 PMID: 2225077
  42. A bulge structure in HIV-1 TAR RNA is required for Tat binding and Tat-mediated trans-activation.
    Genes Dev. 1990 Aug;4(8):1365-73 PMID: 2227414
  43. PAS1, a yeast gene required for peroxisome biogenesis, encodes a member of a novel family of putative ATPases.
    Cell. 1991 Feb 8;64(3):499-510 PMID: 1825027
  44. Synergy between HIV-1 Tat and adenovirus E1A is principally due to stabilization of transcriptional elongation.
    Genes Dev. 1990 Dec;4(12B):2397-408 PMID: 2149119
  45. Getting started with yeast.
    Methods Enzymol. 1991;194:3-21 PMID: 2005794
  46. Nondissociation of GAL4 and GAL80 in vivo after galactose induction.
    Science. 1992 May 29;256(5061):1333-5 PMID: 1598579
  47. A transcription factor with SH2 and SH3 domains is directly activated by an interferon alpha-induced cytoplasmic protein tyrosine kinase(s).
    Cell. 1992 Jul 24;70(2):323-35 PMID: 1638633
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1993-01-01
Pages
138-42
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC45615
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]