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PMID: 9230387 Published · ppublish English Journal Article

PCR amplification and comparison of nucleotide sequences from the groESL heat shock operon of Ehrlichia species.

Journal of clinical microbiology ·Vol. 35 ·No. 8 ·1997-08-00 ·Pages 2087-92

Sumner JW, Nicholson WL, Massung RF

Abstract

Degenerate PCR primers derived from conserved regions of the eubacterial groESL heat shock operon were used to amplify groESL sequences of Ehrlichia equi, Ehrlichia phagocytophila, the agent of human granulocytic ehrlichiosis (HGE), Ehrlichia canis, Bartonella henselae, and Rickettsia rickettsii. The groESL nucleotide sequences were less conserved than the previously determined 16S rRNA gene sequences of these bacteria. A phylogenetic tree derived from deduced GroEL amino acid sequences was similar to trees based on 16S rRNA gene sequences. Nucleotide sequences obtained from clinical samples containing E. equi, E. phagocytophila, or the HGE agent were very similar (99.9 to 99.0% identity), and the deduced amino acid sequences were identical. Some divergence was evident between nucleotide sequences amplified from samples originating from the United States (E. equi and the HGE agent) and sequences from the European species, E. phagocytophila. A single pair of PCR primers derived from these sequences was used to detect E. chaffeensis and HGE agent DNA in blood samples from human patients with ehrlichiosis.

MeSH Terms
Base Sequence Chaperonin 10/genetics Chaperonin 60/genetics DNA Primers DNA, Bacterial/analysis Ehrlichia/classification,genetics Humans Molecular Sequence Data Operon/genetics Phylogeny Polymerase Chain Reaction Sequence Analysis, DNA Sequence Homology, Nucleic Acid
Chemicals
Chaperonin 10 Chaperonin 60 DNA Primers DNA, Bacterial
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Sumner J W
Viral and Rickettsial Zoonoses Branch, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA. [email protected]
Nicholson W L
Massung R F
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Article Info
Journal
Journal of clinical microbiology
Abbr.
J Clin Microbiol
ISSN
0095-1137
Published
1997-08-00
Pages
2087-92
Language
English
Region
United States
NLM ID
7505564
PMCID
PMC229908
Subset
IM
Databases
GENBANK
U96727, U96728, U96729, U96730, U96731, U96732, U96733, U96734, U96735
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