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PMID: 9580707 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Oligoribonucleotide circularization by 'template-mediated' ligation with T4 RNA ligase: synthesis of circular hammerhead ribozymes.

Nucleic acids research ·Vol. 26 ·No. 10 ·1998-05-15 ·Pages 2502-4

Wang L, Ruffner DE

Abstract

Circular hammerhead ribozymes were synthesized from linear oligoribonucleotides using T4 RNA ligase. Some of the precursors could not be efficiently circularized under standard conditions. For these molecules, the use of a DNA template allowed their efficient circularization. The template was designed to prevent the precursor from folding into an unsuitable structure. The template allowed circular ribozymes as small as 15 nucleotides in length to be efficiently synthesized at concentrations as high as 50 microM in the ligation reaction. The circular products retained their biological activity.

MeSH Terms
Bacteriophage T4/enzymology DNA DNA, Circular/biosynthesis,chemistry Nucleic Acid Conformation Oligoribonucleotides/chemistry RNA Ligase (ATP) RNA, Catalytic/biosynthesis,chemistry Templates, Genetic
Chemicals
DNA, Circular Oligoribonucleotides RNA, Catalytic DNA RNA Ligase (ATP)
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Wang L
Department of Bioengineering, University of Utah, 421 Wakara Way, Suite 318, Salt Lake City, UT 84108, USA.
Ruffner D E
References (12)
12 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1998-05-15
Pages
2502-4
Language
English
Region
England
NLM ID
0411011
PMCID
PMC147549
Subset
IM
Grants
NIAID NIH HHS · 5R29AI34278 · United States
NCI NIH HHS · CA42014 · United States
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