Abstract
Chaperones of the Hsp70 family bind to unfolded or partially folded polypeptides to facilitate many cellular processes. ATP hydrolysis and substrate binding, the two key molecular activities of this chaperone, are modulated by the cochaperone DnaJ. By using both genetic and biochemical approaches, we provide evidence that DnaJ binds to at least two sites on the Escherichia coli Hsp70 family member DnaK: under the ATPase domain in a cleft between its two subdomains and at or near the pocket of substrate binding. The lower cleft of the ATPase domain is defined as a binding pocket for the J-domain because (i) a DnaK mutation located in this cleft (R167H) is an allele-specific suppressor of the binding defect of the DnaJ mutation, D35N and (ii) alanine substitution of two residues close to R167 in the crystal structure, N170A and T173A, significantly decrease DnaJ binding. A second binding determinant is likely to be in the substrate-binding domain because some DnaK mutations in the vicinity of the substrate-binding pocket are defective in either the affinity (G400D, G539D) or rate (D526N) of both peptide and DnaJ binding to DnaK. Binding of DnaJ may propagate conformational changes to the nearby ATPase catalytic center and substrate-binding sites as well as facilitate communication between these two domains to alter the molecular properties of Hsp70.
MeSH Terms
Adenosine Triphosphatases/chemistry,metabolism
Amino Acid Substitution
Bacterial Proteins/chemistry,metabolism
Binding Sites
Escherichia coli/genetics,growth & development,metabolism
Escherichia coli Proteins
HSP40 Heat-Shock Proteins
HSP70 Heat-Shock Proteins/chemistry,metabolism
Heat-Shock Proteins/chemistry,metabolism
Kinetics
Models, Molecular
Molecular Chaperones/metabolism
Mutagenesis, Site-Directed
Phenotype
Protein Structure, Secondary
Recombinant Proteins/chemistry,metabolism
Chemicals
Bacterial Proteins
DnaJ protein, E coli
Escherichia coli Proteins
HSP40 Heat-Shock Proteins
HSP70 Heat-Shock Proteins
Heat-Shock Proteins
Molecular Chaperones
Recombinant Proteins
Adenosine Triphosphatases
dnaK protein, E coli
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Suh W C
Departments of Microbiology and Stomatology, University of California, San Francisco, CA 94143, USA.
Burkholder W F
Lu C Z
Zhao X
Gottesman M E
Gross C A
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