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PMID: 10835372 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Partial suppression of the fission yeast rqh1(-) phenotype by expression of a bacterial Holliday junction resolvase.

The EMBO journal ·Vol. 19 ·No. 11 ·2000-06-01 ·Pages 2751-62

Doe CL, Dixon J, Osman F, Whitby MC

Abstract

A key stage during homologous recombination is the processing of the Holliday junction, which determines the outcome of the recombination reaction. To dissect the pathways of Holliday junction processing in a eukaryote, we have targeted an Escherichia coli Holliday junction resolvase to the nuclei of fission yeast recombination-deficient mutants and analysed their phenotypes. The resolvase partially complements the UV and hydroxyurea hypersensitivity and associated aberrant mitoses of an rqh1(-) mutant. Rqh1 is a member of the RecQ subfamily of DNA helicases that control recombination particularly during S-phase. Significantly, overexpression of the resolvase in wild-type cells partly mimics the loss of viability, hyper-recombination and 'cut' phenotype of an rqh1(-) mutant. These results indicate that Holliday junctions form in wild-type cells that are normally removed in a non-recombinogenic way, possibly by Rqh1 catalysing their reverse branch migration. We propose that in the absence of Rqh1, replication fork arrest results in the accumulation of Holliday junctions, which can either impede sister chromatid segregation or lead to the formation of recombinants through Holliday junction resolution.

MeSH Terms
Cell Nucleus/metabolism DNA Helicases/deficiency,genetics DNA, Fungal/genetics,metabolism Endodeoxyribonucleases/genetics,physiology Escherichia coli/enzymology Escherichia coli Proteins Eukaryotic Cells/metabolism Fungal Proteins/genetics,physiology Genes, Reporter Genes, Synthetic Genetic Complementation Test Green Fluorescent Proteins Holliday Junction Resolvases Luminescent Proteins/genetics Models, Genetic Nuclear Localization Signals Nuclear Proteins/genetics,physiology Phenotype Radiation Tolerance/genetics Recombinant Fusion Proteins/physiology Recombination, Genetic/physiology S Phase Schizosaccharomyces/genetics,metabolism,radiation effects Schizosaccharomyces pombe Proteins Ultraviolet Rays
Chemicals
DNA, Fungal Escherichia coli Proteins Fungal Proteins Luminescent Proteins Nuclear Localization Signals Nuclear Proteins Recombinant Fusion Proteins Schizosaccharomyces pombe Proteins Green Fluorescent Proteins Endodeoxyribonucleases Holliday Junction Resolvases RusA protein, E coli DNA Helicases Rqh1 protein, S pombe
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Doe C L
Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK.
Dixon J
Osman F
Whitby M C
References (50)
50 references, click to expand
  1. Topoisomerase III is essential for accurate nuclear division in Schizosaccharomyces pombe.
    Nucleic Acids Res. 1999 Oct 15;27(20):4050-8 PMID: 10497270
  2. Holliday junction processing in bacteria: insights from the evolutionary conservation of RuvABC, RecG, and RusA.
    J Bacteriol. 1999 Sep;181(18):5543-50 PMID: 10482492
  3. RecQ and RecJ process blocked replication forks prior to the resumption of replication in UV-irradiated Escherichia coli.
    Mol Gen Genet. 1999 Oct;262(3):543-51 PMID: 10589843
  4. Replication fork pausing and recombination or "gimme a break".
    Genes Dev. 2000 Jan 1;14(1):1-10 PMID: 10640269
  5. Palindromes as substrates for multiple pathways of recombination in Escherichia coli.
    Genetics. 2000 Feb;154(2):513-22 PMID: 10655207
  6. The Bloom's syndrome gene product promotes branch migration of holliday junctions.
    Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6504-8 PMID: 10823897
  7. A model for replication repair in mammalian cells.
    J Mol Biol. 1976 Mar 5;101(3):417-25 PMID: 1255724
  8. Postreplication repair in E. coli: strand exchange reactions of gapped DNA by RecA protein.
    Mol Gen Genet. 1982;187(2):209-17 PMID: 6217396
  9. Cytogenetics of Bloom's syndrome.
    Cancer Genet Cytogenet. 1986 May;22(1):1-18 PMID: 3513946
  10. Homologous recombination is elevated in some Werner-like syndromes but not during normal in vitro or in vivo senescence of mammalian cells.
    Mutat Res. 1990 Sep-Nov;237(5-6):259-69 PMID: 2079965
  11. Comparison of Schizosaccharomyces pombe expression systems.
    Nucleic Acids Res. 1993 Jun 25;21(12):2955-6 PMID: 8332516
  12. Resolution of recombination intermediates by a mammalian activity functionally analogous to Escherichia coli RuvC resolvase.
    J Biol Chem. 1994 Feb 18;269(7):5202-9 PMID: 8106502
  13. The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase.
    Mol Cell Biol. 1994 Dec;14(12):8391-8 PMID: 7969174
  14. Sgs1: a eukaryotic homolog of E. coli RecQ that interacts with topoisomerase II in vivo and is required for faithful chromosome segregation.
    Cell. 1995 Apr 21;81(2):253-60 PMID: 7736577
  15. Genetic control of intrachromosomal recombination.
    Bioessays. 1995 Feb;17(2):147-59 PMID: 7748165
  16. On the mechanism of UV and gamma-ray-induced intrachromosomal recombination in yeast cells synchronized in different stages of the cell cycle.
    Mol Gen Genet. 1995 Aug 21;248(3):301-10 PMID: 7565592
  17. Collapse and repair of replication forks in Escherichia coli.
    Mol Microbiol. 1995 May;16(3):373-84 PMID: 7565099
  18. The Bloom's syndrome gene product is homologous to RecQ helicases.
    Cell. 1995 Nov 17;83(4):655-66 PMID: 7585968
  19. Positional cloning of the Werner's syndrome gene.
    Science. 1996 Apr 12;272(5259):258-62 PMID: 8602509
  20. Hydroxyurea induces recombination in dividing but not in G1 or G2 cell cycle arrested yeast cells.
    Mutat Res. 1996 Jul 5;354(1):69-75 PMID: 8692208
  21. DNA strand annealing is promoted by the yeast Rad52 protein.
    Proc Natl Acad Sci U S A. 1996 Oct 1;93(20):10729-34 PMID: 8855248
  22. SGS1, a homologue of the Bloom's and Werner's syndrome genes, is required for maintenance of genome stability in Saccharomyces cerevisiae.
    Genetics. 1996 Nov;144(3):935-45 PMID: 8913739
  23. DNA double-strand breaks caused by replication arrest.
    EMBO J. 1997 Jan 15;16(2):430-8 PMID: 9029161
  24. RecQ DNA helicase is a suppressor of illegitimate recombination in Escherichia coli.
    Proc Natl Acad Sci U S A. 1997 Apr 15;94(8):3860-5 PMID: 9108069
  25. Replication fork bypass of a pyrimidine dimer blocking leading strand DNA synthesis.
    J Biol Chem. 1997 May 23;272(21):13945-54 PMID: 9153257
  26. Sequence specificity and biochemical characterization of the RusA Holliday junction resolvase of Escherichia coli.
    J Biol Chem. 1997 Jun 6;272(23):14873-82 PMID: 9169457
  27. rqh1+, a fission yeast gene related to the Bloom's and Werner's syndrome genes, is required for reversible S phase arrest.
    EMBO J. 1997 May 15;16(10):2682-92 PMID: 9184215
  28. Deletions at stalled replication forks occur by two different pathways.
    EMBO J. 1997 Jun 2;16(11):3332-40 PMID: 9214648
  29. Holliday junctions accumulate in replication mutants via a RecA homolog-independent mechanism.
    Cell. 1997 Jul 11;90(1):87-96 PMID: 9230305
  30. Accelerated aging and nucleolar fragmentation in yeast sgs1 mutants.
    Science. 1997 Aug 29;277(5330):1313-6 PMID: 9271578
  31. A new Holliday junction resolving enzyme from Schizosaccharomyces pombe that is homologous to CCE1 from Saccharomyces cerevisiae.
    J Mol Biol. 1997 Oct 3;272(4):509-22 PMID: 9325108
  32. Role of Schizosaccharomyces pombe RecQ homolog, recombination, and checkpoint genes in UV damage tolerance.
    Mol Cell Biol. 1997 Dec;17(12):6868-75 PMID: 9372918
  33. Extrachromosomal rDNA circles--a cause of aging in yeast.
    Cell. 1997 Dec 26;91(7):1033-42 PMID: 9428525
  34. RecQ helicase, in concert with RecA and SSB proteins, initiates and disrupts DNA recombination.
    Genes Dev. 1998 Apr 15;12(8):1134-44 PMID: 9553043
  35. Fission yeast rad12+ regulates cell cycle checkpoint control and is homologous to the Bloom's syndrome disease gene.
    Mol Cell Biol. 1998 May;18(5):2721-8 PMID: 9566891
  36. Bloom's and Werner's syndrome genes suppress hyperrecombination in yeast sgs1 mutant: implication for genomic instability in human diseases.
    Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8733-8 PMID: 9671747
  37. Role of the human RAD51 protein in homologous recombination and double-stranded-break repair.
    Trends Biochem Sci. 1998 Jul;23(7):247-51 PMID: 9697414
  38. RuvAB acts at arrested replication forks.
    Cell. 1998 Oct 30;95(3):419-30 PMID: 9814711
  39. Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I.
    Genes Dev. 1998 Dec 15;12(24):3821-30 PMID: 9869636
  40. Identification of three aspartic acid residues essential for catalysis by the RusA holliday junction resolvase.
    J Mol Biol. 1999 Feb 19;286(2):403-15 PMID: 9973560
  41. DNA structure checkpoint pathways in Schizosaccharomyces pombe.
    Biochimie. 1999 Jan-Feb;81(1-2):173-81 PMID: 10214922
  42. Binding of double-strand breaks in DNA by human Rad52 protein.
    Nature. 1999 Apr 22;398(6729):728-31 PMID: 10227297
  43. Elimination of replication block protein Fob1 extends the life span of yeast mother cells.
    Mol Cell. 1999 Apr;3(4):447-55 PMID: 10230397
  44. Mutations in RECQL4 cause a subset of cases of Rothmund-Thomson syndrome.
    Nat Genet. 1999 May;22(1):82-4 PMID: 10319867
  45. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae.
    Microbiol Mol Biol Rev. 1999 Jun;63(2):349-404 PMID: 10357855
  46. Binding specificity determines polarity of DNA unwinding by the Sgs1 protein of S. cerevisiae.
    J Mol Biol. 1999 Jun 4;289(2):235-48 PMID: 10366502
  47. Defending genome integrity during DNA replication: a proposed role for RecQ family helicases.
    Bioessays. 1999 Apr;21(4):286-94 PMID: 10377891
  48. Genetic recombination: Helicases and topoisomerases link up.
    Curr Biol. 1999 Jul 15;9(14):R518-20 PMID: 10421567
  49. PriA-directed assembly of a primosome on D loop DNA.
    J Biol Chem. 1999 Aug 27;274(35):25033-41 PMID: 10455182
  50. Visualisation of plasmid replication intermediates containing reversed forks.
    Nucleic Acids Res. 2000 Jan 15;28(2):498-503 PMID: 10606648
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
2000-06-01
Pages
2751-62
Language
English
Region
England
NLM ID
8208664
PMCID
PMC212752
Subset
IM
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