Home LiteratureArticle Details
PMID: 11689439 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

An effector of Ypt6p binds the SNARE Tlg1p and mediates selective fusion of vesicles with late Golgi membranes.

The EMBO journal ·Vol. 20 ·No. 21 ·2001-11-01 ·Pages 5991-8

Siniossoglou S, Pelham HR

Abstract

Membrane traffic requires vesicles to fuse with a specific target, and SNARE proteins and Rab/Ypt GTPases contribute to this specificity. In the yeast Saccharomyces cerevisae, the Rab/Ypt GTPase Ypt6p is required for fusion of endosome-derived vesicles with the late Golgi. We have shown previously that activation of Ypt6p depends on its exchange factor, Ric1p-Rgp1p, a peripheral membrane protein complex restricted to the Golgi. We show here that a conserved trimeric protein complex, VFT (Vps52/53/54), binds directly to Ypt6p:GTP. Localization of VFT to the Golgi requires Ypt6p, but is unaffected in gos1 and tlg1 mutants, in which late Golgi integral membrane proteins, including SNAREs, are mislocalized. The VFT complex also binds directly to the N-terminal domain of the SNARE Tlg1p, both in vitro and in vivo, in a Ypt6p-independent manner. We suggest that the VFT complex links vesicles containing Tlg1p to their target, which is defined by the local activation of Ypt6p.

MeSH Terms
Cytoplasmic Vesicles/metabolism Endosomes/metabolism Fungal Proteins/metabolism Golgi Apparatus/metabolism Intracellular Membranes/metabolism Macromolecular Substances Membrane Fusion/physiology Membrane Proteins/metabolism Monomeric GTP-Binding Proteins/genetics,metabolism Protein Binding/physiology Protein Structure, Tertiary/physiology Recombinant Fusion Proteins/genetics,metabolism SNARE Proteins Saccharomyces cerevisiae Proteins/metabolism Vesicular Transport Proteins
Chemicals
Fungal Proteins Macromolecular Substances Membrane Proteins Recombinant Fusion Proteins SNARE Proteins Saccharomyces cerevisiae Proteins VPS52 protein, S cerevisiae VPS54 protein, S cerevisiae Vesicular Transport Proteins Monomeric GTP-Binding Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Siniossoglou S
MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK.
Pelham H R
References (46)
46 references, click to expand
  1. Rab proteins as membrane organizers.
    Nat Rev Mol Cell Biol. 2001 Feb;2(2):107-17 PMID: 11252952
  2. Compartmental specificity of cellular membrane fusion encoded in SNARE proteins.
    Nature. 2000 Sep 14;407(6801):153-9 PMID: 11001046
  3. The phosphatidylinositol 3-phosphate binding protein Vac1p interacts with a Rab GTPase and a Sec1p homologue to facilitate vesicle-mediated vacuolar protein sorting.
    Mol Biol Cell. 1999 Jun;10(6):1873-89 PMID: 10359603
  4. The GRIP domain - a novel Golgi-targeting domain found in several coiled-coil proteins.
    Curr Biol. 1999 Apr 8;9(7):377-80 PMID: 10209120
  5. The small GTP-binding protein rab6 functions in intra-Golgi transport.
    J Cell Biol. 1994 Dec;127(6 Pt 1):1575-88 PMID: 7798313
  6. The Sec1p homologue Vps45p binds to the syntaxin Tlg2p.
    Eur J Cell Biol. 1998 Dec;77(4):263-8 PMID: 9930650
  7. Lipid metabolism and regulation of membrane trafficking.
    Traffic. 2000 Mar;1(3):195-202 PMID: 11208102
  8. Ypt and Rab GTPases: insight into functions through novel interactions.
    Curr Opin Cell Biol. 2001 Aug;13(4):500-11 PMID: 11454458
  9. Ric1p and Rgp1p form a complex that catalyses nucleotide exchange on Ypt6p.
    EMBO J. 2000 Sep 15;19(18):4885-94 PMID: 10990452
  10. Two separate signals act independently to localize a yeast late Golgi membrane protein through a combination of retrieval and retention.
    J Cell Biol. 1997 Jan 27;136(2):287-97 PMID: 9015300
  11. Transport-vesicle targeting: tethers before SNAREs.
    Nat Cell Biol. 1999 May;1(1):E17-22 PMID: 10559876
  12. Two new Ypt GTPases are required for exit from the yeast trans-Golgi compartment.
    J Cell Biol. 1997 May 5;137(3):563-80 PMID: 9151665
  13. Oligomeric complexes link Rab5 effectors with NSF and drive membrane fusion via interactions between EEA1 and syntaxin 13.
    Cell. 1999 Aug 6;98(3):377-86 PMID: 10458612
  14. Structural and functional analysis of a novel coiled-coil protein involved in Ypt6 GTPase-regulated protein transport in yeast.
    Mol Biol Cell. 1999 Jan;10(1):63-75 PMID: 9880327
  15. Mtr10p functions as a nuclear import receptor for the mRNA-binding protein Npl3p.
    EMBO J. 1998 Apr 15;17(8):2196-207 PMID: 9545233
  16. A genomic perspective on membrane compartment organization.
    Nature. 2001 Feb 15;409(6822):839-41 PMID: 11237004
  17. Golgi structure correlates with transitional endoplasmic reticulum organization in Pichia pastoris and Saccharomyces cerevisiae.
    J Cell Biol. 1999 Apr 5;145(1):69-81 PMID: 10189369
  18. Three-dimensional structure of the neuronal-Sec1-syntaxin 1a complex.
    Nature. 2000 Mar 23;404(6776):355-62 PMID: 10746715
  19. A Ypt/Rab effector complex containing the Sec1 homolog Vps33p is required for homotypic vacuole fusion.
    Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9402-7 PMID: 10944212
  20. Prediction and analysis of coiled-coil structures.
    Methods Enzymol. 1996;266:513-25 PMID: 8743703
  21. Rab1 recruitment of p115 into a cis-SNARE complex: programming budding COPII vesicles for fusion.
    Science. 2000 Jul 21;289(5478):444-8 PMID: 10903204
  22. The Rab5 effector EEA1 is a core component of endosome docking.
    Nature. 1999 Feb 18;397(6720):621-5 PMID: 10050856
  23. A yeast t-SNARE involved in endocytosis.
    Mol Biol Cell. 1998 Oct;9(10):2873-89 PMID: 9763449
  24. The dynamics of golgi protein traffic visualized in living yeast cells.
    Mol Biol Cell. 1998 Sep;9(9):2667-80 PMID: 9725919
  25. Two GTPase isoforms, Ypt31p and Ypt32p, are essential for Golgi function in yeast.
    EMBO J. 1996 Dec 2;15(23):6460-75 PMID: 8978673
  26. Rab6 coordinates a novel Golgi to ER retrograde transport pathway in live cells.
    J Cell Biol. 1999 Nov 15;147(4):743-60 PMID: 10562278
  27. Rabenosyn-5, a novel Rab5 effector, is complexed with hVPS45 and recruited to endosomes through a FYVE finger domain.
    J Cell Biol. 2000 Oct 30;151(3):601-12 PMID: 11062261
  28. Asymmetric requirements for a Rab GTPase and SNARE proteins in fusion of COPII vesicles with acceptor membranes.
    J Cell Biol. 2000 Apr 3;149(1):55-66 PMID: 10747087
  29. Vps52p, Vps53p, and Vps54p form a novel multisubunit complex required for protein sorting at the yeast late Golgi.
    Mol Biol Cell. 2000 Jan;11(1):305-23 PMID: 10637310
  30. Class C Vps protein complex regulates vacuolar SNARE pairing and is required for vesicle docking/fusion.
    Mol Cell. 2000 Sep;6(3):661-71 PMID: 11030345
  31. Vac1p coordinates Rab and phosphatidylinositol 3-kinase signaling in Vps45p-dependent vesicle docking/fusion at the endosome.
    Curr Biol. 1999 Feb 11;9(3):159-62 PMID: 10021387
  32. Synthetic genetic interactions with temperature-sensitive clathrin in Saccharomyces cerevisiae. Roles for synaptojanin-like Inp53p and dynamin-related Vps1p in clathrin-dependent protein sorting at the trans-Golgi network.
    Genetics. 2000 Jan;154(1):83-97 PMID: 10628971
  33. Two syntaxin homologues in the TGN/endosomal system of yeast.
    EMBO J. 1998 Jan 2;17(1):113-26 PMID: 9427746
  34. Ric1p and the Ypt6p GTPase function in a common pathway required for localization of trans-Golgi network membrane proteins.
    Mol Biol Cell. 2001 Jan;12(1):13-26 PMID: 11160819
  35. Selective formation of Sed5p-containing SNARE complexes is mediated by combinatorial binding interactions.
    Mol Biol Cell. 2001 Mar;12(3):521-38 PMID: 11251068
  36. Initial docking of ER-derived vesicles requires Uso1p and Ypt1p but is independent of SNARE proteins.
    EMBO J. 1998 Apr 15;17(8):2156-65 PMID: 9545229
  37. Specific retrieval of the exocytic SNARE Snc1p from early yeast endosomes.
    Mol Biol Cell. 2000 Jan;11(1):23-38 PMID: 10637288
  38. Two new members of a family of Ypt/Rab GTPase activating proteins. Promiscuity of substrate recognition.
    J Biol Chem. 1999 Nov 19;274(47):33186-9 PMID: 10559187
  39. The syntaxin Tlg1p mediates trafficking of chitin synthase III to polarized growth sites in yeast.
    Mol Biol Cell. 1998 Dec;9(12):3383-97 PMID: 9843576
  40. Alternative splicing of the human Rab6A gene generates two close but functionally different isoforms.
    Mol Biol Cell. 2000 Nov;11(11):3819-33 PMID: 11071909
  41. Dynamic retention of TGN membrane proteins in Saccharomyces cerevisiae.
    Trends Cell Biol. 1993 Dec;3(12):426-32 PMID: 14731888
  42. Purification and identification of novel Rab effectors using affinity chromatography.
    Methods. 2000 Apr;20(4):403-10 PMID: 10720461
  43. New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites.
    Gene. 1988 Dec 30;74(2):527-34 PMID: 3073106
  44. Luv1p/Rki1p/Tcs3p/Vps54p, a yeast protein that localizes to the late Golgi and early endosome, is required for normal vacuolar morphology.
    Mol Biol Cell. 2000 Jul;11(7):2429-43 PMID: 10888679
  45. The Rab5 effector EEA1 interacts directly with syntaxin-6.
    J Biol Chem. 1999 Oct 8;274(41):28857-60 PMID: 10506127
  46. Cytoplasm to vacuole trafficking of aminopeptidase I requires a t-SNARE-Sec1p complex composed of Tlg2p and Vps45p.
    EMBO J. 1999 Nov 1;18(21):6005-16 PMID: 10545112
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
2001-11-01
Pages
5991-8
Language
English
Region
England
NLM ID
8208664
PMCID
PMC125711
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]