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PMID: 15175650 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation.

The EMBO journal ·Vol. 23 ·No. 13 ·2004-07-07 ·Pages 2597-607

Nourani A, Utley RT, Allard S, Côté J

Abstract

The remodeling of the promoter chromatin structure is a key event for the induction of the PHO5 gene. Two DNA-binding proteins Pho2 and Pho4 are critical for this step. We found that the NuA4 histone acetyltransferase complex is essential for PHO5 transcriptional induction without affecting Pho4 translocation upon phosphate starvation. Our data also indicate that NuA4 is critical for the chromatin remodeling event that occurs over the PHO5 promoter prior to activation. Using Chromatin IP analysis, we found that Esa1-dependent histone H4 acetylation at the PHO5 promoter correlates with specific recruitment of the NuA4 complex to this locus under repressing conditions. We demonstrate that the homeodomain transcriptional activator Pho2 is responsible for this recruitment in vivo and interacts directly with the NuA4 complex. Finally, we show that Pho4 is unable to bind the PHO5 promoter without prior action of NuA4. These results indicate that, before induction, NuA4 complex recruitment by Pho2 is an essential event that presets the PHO5 promoter for subsequent binding by Pho4, chromatin remodeling and transcription.

MeSH Terms
Acetylation Acetyltransferases/genetics,metabolism Acid Phosphatase Cell Nucleus/metabolism Chromatin/metabolism Chromatin Immunoprecipitation DNA-Binding Proteins/metabolism Enzyme Activation Fungal Proteins/genetics,metabolism Histone Acetyltransferases Histones/metabolism Homeodomain Proteins/metabolism Mutation Promoter Regions, Genetic Saccharomyces cerevisiae/genetics,metabolism Saccharomyces cerevisiae Proteins/genetics,metabolism Trans-Activators/metabolism Transcription Factors/metabolism
Chemicals
Chromatin DNA-Binding Proteins Fungal Proteins Histones Homeodomain Proteins PHO2 protein, S cerevisiae PHO4 protein, S cerevisiae Saccharomyces cerevisiae Proteins Trans-Activators Transcription Factors YAF9 protein, S cerevisiae Acetyltransferases Esa1 protein, S cerevisiae Histone Acetyltransferases Acid Phosphatase PHO5 protein, S cerevisiae
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Nourani Amine
Laval University Cancer Research Center, Hôtel-Dieu de Québec (CHUQ), Quebec City, Canada.
Utley Rhea T
Allard Stéphane
Côté Jacques
References (27)
27 references, click to expand
  1. Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast.
    Trends Biochem Sci. 1997 Mar;22(3):93-7 PMID: 9066259
  2. NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p.
    EMBO J. 1999 Sep 15;18(18):5108-19 PMID: 10487762
  3. Yeast histone H4 N-terminal sequence is required for promoter activation in vivo.
    Cell. 1991 Jun 14;65(6):1023-31 PMID: 2044150
  4. Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.
    EMBO J. 1990 Aug;9(8):2523-8 PMID: 2196175
  5. Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast.
    EMBO J. 1986 Oct;5(10):2681-7 PMID: 3023055
  6. Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.
    Mol Cell. 2003 Jun;11(6):1599-607 PMID: 12820972
  7. Nucleosomes unfold completely at a transcriptionally active promoter.
    Mol Cell. 2003 Jun;11(6):1587-98 PMID: 12820971
  8. Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin.
    Genes Dev. 2003 Jun 1;17(11):1415-28 PMID: 12782659
  9. Multiple mechanistically distinct functions of SAGA at the PHO5 promoter.
    Mol Cell Biol. 2003 May;23(10):3468-76 PMID: 12724405
  10. Regulation of chromatin remodeling by inositol polyphosphates.
    Science. 2003 Jan 3;299(5603):114-6 PMID: 12434012
  11. Identification of a Wnt/Dvl/beta-Catenin --> Pitx2 pathway mediating cell-type-specific proliferation during development.
    Cell. 2002 Nov 27;111(5):673-85 PMID: 12464179
  12. Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.
    Cell. 2002 Nov 1;111(3):369-79 PMID: 12419247
  13. Mutations in the pho2 (bas2) transcription factor that differentially affect activation with its partner proteins bas1, pho4, and swi5.
    J Biol Chem. 2002 Oct 4;277(40):37612-8 PMID: 12145299
  14. Reconstitution of nucleosome positioning, remodeling, histone acetylation, and transcriptional activation on the PHO5 promoter.
    J Biol Chem. 2002 Aug 23;277(34):31038-47 PMID: 12060664
  15. Role of an ING1 growth regulator in transcriptional activation and targeted histone acetylation by the NuA4 complex.
    Mol Cell Biol. 2001 Nov;21(22):7629-40 PMID: 11604499
  16. Increasing the rate of chromatin remodeling and gene activation--a novel role for the histone acetyltransferase Gcn5.
    EMBO J. 2001 Sep 3;20(17):4944-51 PMID: 11532958
  17. Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase.
    Mol Cell. 2000 Dec;6(6):1297-307 PMID: 11163204
  18. Global histone acetylation and deacetylation in yeast.
    Nature. 2000 Nov 23;408(6811):495-8 PMID: 11100734
  19. Histone H2A.Z regulats transcription and is partially redundant with nucleosome remodeling complexes.
    Cell. 2000 Oct 27;103(3):411-22 PMID: 11081628
  20. Transcriptional regulation of the yeast PHO8 promoter in comparison to the coregulated PHO5 promoter.
    J Biol Chem. 2000 Jul 28;275(30):22678-85 PMID: 10801809
  21. Mapping DNA interaction sites of chromosomal proteins. Crosslinking studies in yeast.
    Methods Mol Biol. 1999;119:469-79 PMID: 10804533
  22. Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding.
    EMBO J. 1999 Nov 15;18(22):6407-14 PMID: 10562552
  23. Esa1p is an essential histone acetyltransferase required for cell cycle progression.
    Mol Cell Biol. 1999 Apr;19(4):2515-26 PMID: 10082517
  24. Transcriptional activators direct histone acetyltransferase complexes to nucleosomes.
    Nature. 1998 Jul 30;394(6692):498-502 PMID: 9697775
  25. Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast.
    Mol Cell. 1998 Mar;1(4):495-505 PMID: 9660934
  26. Cooperative Pho2-Pho4 interactions at the PHO5 promoter are critical for binding of Pho4 to UASp1 and for efficient transactivation by Pho4 at UASp2.
    Mol Cell Biol. 1998 May;18(5):2629-39 PMID: 9566882
  27. All four core histone N-termini contain sequences required for the repression of basal transcription in yeast.
    EMBO J. 1996 Aug 1;15(15):3974-85 PMID: 8670902
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
2004-07-07
Epub
2004-00-03
Pages
2597-607
Language
English
Region
England
NLM ID
8208664
PMCID
PMC449761
Subset
IM
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