Abstract
The psbL gene which codes for a 38 amino acid peptide of photosystem II, together with the photosynthetic genes psbE and psbF, is contained in a conserved position of many species of higher plant plastomes. The alignment of the psbL nucleotide sequences from ten species shows strong conservation, which is indicative of a functional gene. The tobacco and spinach psbL genes have, however, an ACG codon instead of the initiator ATG codon observed in the homologous position of the other eight species. Evidence is presented that in tobacco chloroplasts a translatable psbL mRNA containing an AUG initiator codon is formed by a C to U editing of the ACG codon. This observation, following the previously reported editing of an rpl2 gene in maize chloroplasts, underlines a more widespread occurrence of this type of posttranscriptional mRNA modification and demonstrates its presence in a dicotyledon plant.
MeSH Terms
Base Sequence
Chloroplasts
Codon
Cystine
DNA/genetics
Molecular Sequence Data
Plants, Toxic
Polymerase Chain Reaction
Protein Biosynthesis
RNA, Messenger/biosynthesis,genetics
Sequence Alignment
Tobacco/metabolism
Transcription, Genetic
Uridine
Chemicals
Codon
RNA, Messenger
Cystine
DNA
Uridine
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Kudla J
Institut für Genetik der Martin-Luther-Universität, Halle/S, FRG.
Igloi G L
Metzlaff M
Hagemann R
Kössel H
References (26)
26 references, click to expand
-
Identification of functional open reading frames in chloroplast genomes.
Gene. 1988 Jun 30;66(2):215-22
PMID: 3169573
-
Codon usage in plant genes.
Nucleic Acids Res. 1989 Jan 25;17(2):477-98
PMID: 2644621
-
RNA editing in plant mitochondria.
Nature. 1989 Oct 19;341(6243):662-6
PMID: 2552326
-
Two small open reading frames are co-transcribed with the pea chloroplast genes for the polypeptides of cytochrome b-559.
Curr Genet. 1989 Mar;15(3):213-20
PMID: 2766383
-
Optimization of asymmetric polymerase chain reaction for rapid fluorescent DNA sequencing.
Biotechniques. 1990 Feb;8(2):184-9
PMID: 2317375
-
RNA editing in plant mitochondria.
Science. 1989 Dec 22;246(4937):1632-4
PMID: 2480644
-
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.
Mol Gen Genet. 1989 Jun;217(2-3):185-94
PMID: 2770692
-
A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine.
Cell. 1987 Sep 11;50(6):831-40
PMID: 3621347
-
A non-radioactive automated method for DNA sequence determination.
J Biochem Biophys Methods. 1986 Dec;13(6):315-23
PMID: 3559035
-
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes.
Nucleic Acids Res. 1991 Mar 11;19(5):983-95
PMID: 1708498
-
Alternative promoters are used for genes within maize chloroplast polycistronic transcription units.
Plant Cell. 1990 Apr;2(4):323-33
PMID: 2152119
-
ACG, the initiator codon for a Sendai virus protein.
J Biol Chem. 1988 Jun 25;263(18):8553-6
PMID: 2837456
-
RNA editing in wheat mitochondria results in the conservation of protein sequences.
Nature. 1989 Oct 19;341(6243):660-2
PMID: 2552325
-
Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA.
Cell. 1986 Sep 12;46(6):819-26
PMID: 3019552
-
The wheat mitochondrial gene for subunit I of the NADH dehydrogenase complex: a trans-splicing model for this gene-in-pieces.
Cell. 1991 May 3;65(3):465-72
PMID: 1902143
-
Trans splicing in Oenothera mitochondria: nad1 mRNAs are edited in exon and trans-splicing group II intron sequences.
Cell. 1991 May 3;65(3):473-82
PMID: 1850322
-
The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.
EMBO J. 1986 Sep;5(9):2043-2049
PMID: 16453699
-
Chimeric gRNA-mRNA molecules with oligo(U) tails covalently linked at sites of RNA editing suggest that U addition occurs by transesterification.
Cell. 1991 May 17;65(4):543-50
PMID: 1709591
-
Cytochrome b-559 genes from Oenothera hookeri and Nicotiana tabacum show a remarkably high degree of conservation as compared to spinach. The enigma of cytochrome b-559: highly conserved genes and proteins but no known function.
Curr Genet. 1986;10(8):619-24
PMID: 2450682
-
Editing of a chloroplast mRNA by creation of an initiation codon.
Nature. 1991 Sep 12;353(6340):178-80
PMID: 1653905
-
Structure and organization of Marchantia polymorpha chloroplast genome. III. Gene organization of the large single copy region from rbcL to trnI(CAU).
J Mol Biol. 1988 Sep 20;203(2):333-51
PMID: 3199436
-
A termination codon is created by RNA editing in the petunia atp9 transcript.
Curr Genet. 1991 Jan;19(1):61-4
PMID: 1709830
-
Risk factors in early life as predictors of adult heart disease: the Bogalusa Heart Study.
Am J Med Sci. 1989 Sep;298(3):141-51
PMID: 2679086
-
Organization of the psbE, psbF, orf38, and orf42 gene loci on the Euglena gracilis chloroplast genome.
Curr Genet. 1988 Feb;13(2):173-80
PMID: 3131027
-
Characterization and in vitro expression of the cytochrome b-559 genes of barley. I. Localization and sequence of the genes.
Carlsberg Res Commun. 1988;53(1):43-55
PMID: 3256307
-
Determinant of cistron specificity in bacterial ribosomes.
Nature. 1975 Mar 6;254(5495):34-8
PMID: 803646